prot_Ecto-sp9_F_contig9611.17731.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9611.17731.1
Unique Nameprot_Ecto-sp9_F_contig9611.17731.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length109
Homology
BLAST of mRNA_Ecto-sp9_F_contig9611.17731.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV7_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 1.840e-47
Identity = 88/93 (94.62%), Postives = 89/93 (95.70%), Query Frame = 0
Query:   15 QLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTTEQQGGLFNLSKTFIDPLNNEDATIDSDCIVIDSLIKESANMGSRWTQGAKVFP 107
            +LAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTT  QG LFNLSKTFIDPLNNEDATIDSDCIVIDSLIKESAN GSRWTQGAKVFP
Sbjct:  385 KLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTTFYQG-LFNLSKTFIDPLNNEDATIDSDCIVIDSLIKESANTGSRWTQGAKVFP 476          
BLAST of mRNA_Ecto-sp9_F_contig9611.17731.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF8_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 2.360e-27
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query:   59 GLFNLSKTFIDPLNNEDATIDSDCIVIDSLIKESANMGSRWTQGAKVFPF 108
            GLFNLSKTFIDPLNNEDATIDSDCIVIDSLIKESANMGSRWTQGAKVFPF
Sbjct:    4 GLFNLSKTFIDPLNNEDATIDSDCIVIDSLIKESANMGSRWTQGAKVFPF 53          
BLAST of mRNA_Ecto-sp9_F_contig9611.17731.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EN29_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.070e-18
Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 0
Query:    5 DSLDGNFVFVQLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTTEQQGGLFNLSKTFIDPLNNEDATIDSDCIV-IDSLIKESANMGSRWTQGAKVFPF 108
            DSLDG    + LAYAH VQL+VD+FL+L PFAL+SE+GFWS+ A G+L     G + +L+K  +DPL+N D   DS   + +  LI+ES    +RW  G +  PF
Sbjct:  583 DSLDGK---IPLAYAHFVQLIVDIFLMLAPFALYSELGFWSVPAVGILNIFYSG-MLDLAKILLDPLDNSDFYRDSAVNMDVGVLIRESNAGSNRWKSGLQKLPF 683          
BLAST of mRNA_Ecto-sp9_F_contig9611.17731.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P7A0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.300e-17
Identity = 52/107 (48.60%), Postives = 69/107 (64.49%), Query Frame = 0
Query:    5 DSLDGNFVFVQLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTTEQQGGLFNLSKTFIDPLNNE---DATIDSDCIVIDSLIKESANMGSRWTQGAKVFPF 108
            D LDG    + LAYAH VQ+LVD FLL+ PFAL+SE+G WSI A G+LT     GL +L+K  +DPL+N+   DA ++ D   I  LI+ES    +RW   A++ PF
Sbjct:  238 DQLDGR---IPLAYAHFVQVLVDSFLLIAPFALYSELGIWSIPAVGLLTLFY-AGLLDLAKILLDPLDNDEFYDAPVNFD---IGVLIRESNAGSTRWKYSAEMLPF 337          
BLAST of mRNA_Ecto-sp9_F_contig9611.17731.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P6J3_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 4.960e-17
Identity = 52/107 (48.60%), Postives = 69/107 (64.49%), Query Frame = 0
Query:    5 DSLDGNFVFVQLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTTEQQGGLFNLSKTFIDPLNNE---DATIDSDCIVIDSLIKESANMGSRWTQGAKVFPF 108
            D LDG    + LAYAH VQ+LVD FLL+ PFAL+SE+G WSI A G+LT     GL +L+K  +DPL+N+   DA ++ D   I  LI+ES    +RW   A++ PF
Sbjct:  486 DQLDGR---IPLAYAHFVQVLVDSFLLIAPFALYSELGIWSIPAVGLLTLFY-AGLLDLAKILLDPLDNDEFYDAPVNFD---IGVLIRESNAGSTRWKYSAEMLPF 585          
BLAST of mRNA_Ecto-sp9_F_contig9611.17731.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AB55_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.810e-17
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 0
Query:    5 DSLDGNFVFVQLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTTEQQGGLFNLSKTFIDPLNN------EDATIDSDCIVIDSLIKESANMGSRWTQGAKVFPF 108
            DSLDG    + LAYAH VQ++VDVFL++ PFAL+SE+G WSIVA G+L     G + +LSK  +DPL+N      E+++++ D  V   LI+E     +RWT G +  PF
Sbjct:  505 DSLDGK---IPLAYAHFVQVMVDVFLIMAPFALYSELGIWSIVAVGILHIFYSG-MNDLSKILLDPLDNCNTAFNENSSVNMDVGV---LIREGNAGSTRWTTGLQELPF 607          
BLAST of mRNA_Ecto-sp9_F_contig9611.17731.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YX59_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 4.410e-16
Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 0
Query:    5 DSLDGNFVFVQLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTTEQQGGLFNLSKTFIDPLNNEDATIDSDCIV---IDSLIKESANMGSRWTQGAKVFPF 108
            DSLD     + LAYAH VQ++VDVFL + PFAL+SE+G WS+ A GVL     G + +LSK  +DPL+N D +   D  +   +  LI+ES +  +RW  G +  PF
Sbjct:  514 DSLDAK---IPLAYAHLVQVMVDVFLTMAPFALYSELGIWSVFAVGVLNIFYSG-MNDLSKILLDPLDNCDGSFYQDSSMNMDVGVLIRESNDGSNRWKAGLQELPF 616          
BLAST of mRNA_Ecto-sp9_F_contig9611.17731.1 vs.
Match: Hypothetical (protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FPW8_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 9.900e-15
Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 0
Query:    5 DSLDGNFVFVQLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTTEQQGGLFNLSKTFIDPLNNEDATIDSDCIVIDSLIKESANMGSRWTQGAKVFPF 108
            D +DG    + LAYAH VQ+LVDV L+ +PFAL+++ G W+I+  GVLT     G+ +LSK ++DPL+N+    DS  + +  L+ E     + W +GA   PF
Sbjct:  141 DIIDGR---MSLAYAHLVQMLVDVLLITSPFALYAQQGIWAILTVGVLTVFY-AGVLDLSKMYLDPLDNDGLYDDSVNMDLGVLMNEMNVGAAEWKKGAMFVPF 240          
BLAST of mRNA_Ecto-sp9_F_contig9611.17731.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU07_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 3.090e-14
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 0
Query:   15 QLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTTEQQ 57
            +LAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTT  Q
Sbjct:  387 KLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTTFYQ 429          
BLAST of mRNA_Ecto-sp9_F_contig9611.17731.1 vs.
Match: Hypothetical (protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R8L2_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 4.630e-14
Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = 0
Query:   14 VQLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATGVLTTEQQGGLFNLSKTFIDPLNNEDATIDSDCIVIDSLIKESANMGSRWTQGAKVFPF 108
            + LAY H VQ+LVD F+L+ P AL+ E+G +S VA G+LT    G L +LSK F+DPLNNE  + DS  + +  LI+ES     RW       PF
Sbjct:  473 MPLAYVHLVQILVDTFVLIAPLALYPEIGAYSPVAVGILTFFYTGSL-DLSKVFLDPLNNEKYSEDSIFMDLGILIRESNAASVRWYSAGGKLPF 566          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9611.17731.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.840e-4794.62protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.360e-27100.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Cyclic3.070e-1847.62nucleotide-binding domain-containing protein n=1 T... [more]
Hypothetical2.300e-1748.60protein n=1 Tax=Skeletonema marinoi TaxID=267567 R... [more]
Hypothetical4.960e-1748.60protein n=1 Tax=Skeletonema marinoi TaxID=267567 R... [more]
Hypothetical6.810e-1746.36protein n=1 Tax=Pseudo-nitzschia australis TaxID=4... [more]
Cyclic4.410e-1644.86nucleotide-binding domain-containing protein n=1 T... [more]
Hypothetical9.900e-1541.35protein n=1 Tax=Minutocellus polymorphus TaxID=265... [more]
Uncharacterized3.090e-1493.02protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical4.630e-1446.32protein n=3 Tax=Ditylum brightwellii TaxID=49249 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 17..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..16
NoneNo IPR availableTMHMMTMhelixcoord: 25..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9611contigEcto-sp9_F_contig9611:3852..4996 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9611.17731.1mRNA_Ecto-sp9_F_contig9611.17731.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9611 3852..4996 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9611.17731.1 ID=prot_Ecto-sp9_F_contig9611.17731.1|Name=mRNA_Ecto-sp9_F_contig9611.17731.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=109bp
CARADSLDGNFVFVQLAYAHAVQLLVDVFLLLTPFALFSEVGFWSIVATG
VLTTEQQGGLFNLSKTFIDPLNNEDATIDSDCIVIDSLIKESANMGSRWT
QGAKVFPF*
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