prot_Ecto-sp9_F_contig957.17689.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig957.17689.1
Unique Nameprot_Ecto-sp9_F_contig957.17689.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length653
Homology
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BLAST of mRNA_Ecto-sp9_F_contig957.17689.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG5_ECTSI)

HSP 1 Score: 573 bits (1478), Expect = 3.470e-195
Identity = 592/652 (90.80%), Postives = 594/652 (91.10%), Query Frame = 0 
Query:    1 MFAVQSAPSSGPPRPLIANFWDACPFLGARGGAEGIRGGIGDGRHGGSIGGSTRLLRCFLSLPSSSLSPPSAAVDDSRNSRRRRSRSAKERHPVHGAVACQQVSSSGPTTAPAAAPAPETLPGWIGRLGLDEXXXXXXXXXXXXXXXXXXXXXADAKLVQATRELVVSMKGPKTEHVRQGKPKRRGRPRKNPSLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATAKSTTEERGRWIQERLLLNDATLAKMMEFYPQCVSYRIVENLEPKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQDTLDKKLAFLRGEELNLSDVEVKRIVRNSPSFFTFSVEENMRPKLAWLRERMGLDAIGIRKLVGRSPRVLALKVETIEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAYSVEDNIEPTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYSLEKRWKPRVARIRAKGVTPCFHDHWKPIANRSPAKFDEWLTTLQ 652
            MFAVQS PSSGPPRPLIANFWDACPFLGARGGAEGIRGGIGDGRHG SIGGSTRLLRCFLSLPSSSLSPPSAAVDDSRNS   RSRSAKERHPVHGAVACQQVSSSGPTTA AAAPAPET PGWIGRLGLDEXXXXXXXXXXXXXXXXXXXXXADAKLVQATRELVVSMKGPKTEHV +GKPKRRGRPRKNPSLVE                                         EAT KSTTEERGRWIQERLLLNDATLAKMMEFYPQC+SYRIVENLEPKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TLDKKLAFLRGEELNLSDVEVKRIVRNSPSFFTFSVEENMRPKLAWLRERMGLDAIGIRKLVGRSPRVLALKVETIE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAYSVEDNIEPTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LLYSLEKRWKPRVARIRAKGVTPCFHDHWKPIANRSPAKFDEWLTTLQ
Sbjct:    1 MFAVQSVPSSGPPRPLIANFWDACPFLGARGGAEGIRGGIGDGRHGSSIGGSTRLLRCFLSLPSSSLSPPSAAVDDSRNSXXXRSRSAKERHPVHGAVACQQVSSSGPTTASAAAPAPETPPGWIGRLGLDEXXXXXXXXXXXXXXXXXXXXXADAKLVQATRELVVSMKGPKTEHVIRGKPKRRGRPRKNPSLVEVKESSESQQRRDEKEVTRIEAENLANASKAAKAKELLNVPVEATGKSTTEERGRWIQERLLLNDATLAKMMEFYPQCLSYRIVENLEPKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLDKKLAFLRGEELNLSDVEVKRIVRNSPSFFTFSVEENMRPKLAWLRERMGLDAIGIRKLVGRSPRVLALKVETIERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAYSVEDNIEPTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKALLYSLEKRWKPRVARIRAKGVTPCFHDHWKPIANRSPAKFDEWLTTLQ 652
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BLAST of mRNA_Ecto-sp9_F_contig957.17689.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT3_9PHAE)

HSP 1 Score: 427 bits (1099), Expect = 5.520e-137
Identity = 323/543 (59.48%), Postives = 327/543 (60.22%), Query Frame = 0 
Query:    1 MFAVQSAPSSGPPRPLIANFWDACPFLGARGGAEGIRGGIGDGRHGGSIGGSTRLLRCFLSLPSSSLSPPSAAVDDSRNSRRRRSRSAKERHPVHGAVACQQVSSSGPTTAPAAAPAPETLPGWIGRLGLDEXXXXXXXXXXXXXXXXXXXXXADAKLVQATRELVVSMKGPKTEHVRQGKPKRRGRPRKNPSLVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEATAKSTTEERGRWIQERLLLNDATLAKMMEFYPQ--------------------------------CVSYRIVENLEPKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQDTLDKKLAFLRGEELNLSDV--------------------------------------------------------------------------------EVKRIVRNSPSFFTFSVEENMRPKLAWLRERMGLDAIGIRKLVGRSPRVLALKVETIEG 431
            MFA+QSAP+S P RPLIANFWDACPFLG RGGAEGIRGGIGDGRHG SIGGSTRLLRCFLSLPSSSLSPPSAAVDDSRN     SRSA+ERHPVHGA ACQQVSSS PTTA A APAPETLPGWIGRLGLDEXXXXXXXXXXXXXXXXXXX  ADAKLVQATRELVVSMK P  E VR+GKPKRRGRPRKNPSLVE                                         EA AKSTTE RGRWIQERLLLNDATLAKMMEFYPQ                                CVS RIVENLEPKL                               XXXXXXXXXXXXXXXXXXXXXXXX         LQDTLDKKLAFLRGEELNLSDV                                                                                EVKRIVRNSPSFFTFSVEENMRPKLAWLRERMGLD IGIRKLVGRSPRVLALKVETIEG
Sbjct:    1 MFALQSAPTSCPLRPLIANFWDACPFLGERGGAEGIRGGIGDGRHGSSIGGSTRLLRCFLSLPSSSLSPPSAAVDDSRNXXXXXSRSAEERHPVHGAQACQQVSSSSPTTASATAPAPETLPGWIGRLGLDEXXXXXXXXXXXXXXXXXXXSAADAKLVQATRELVVSMKRPMPEQVRRGKPKRRGRPRKNPSLVEVKESSESQHRRDEKEMMRIKAENLADASKSAEATELLNFPVEAAAKSTTEARGRWIQERLLLNDATLAKMMEFYPQDRMFQRRNSFLTTRPTCRPPLSPNRKTDSYTKCVSNRIVENLEPKLEWLQKELGLDDQAMGKMISTAPVILGLSVEAXXXXXXXXXXXXXXXXXXXXXXXXMAVSSVLVLLQDTLDKKLAFLRGEELNLSDVSAFTAGWGRDGFREIIHTCRNTRPRYIDIVSVQRIFTCCRSSETNRCSTAERQHLEGFVIGGTLAFFTSNQVCRFAMNQVEVKRIVRNSPSFFTFSVEENMRPKLAWLRERMGLDVIGIRKLVGRSPRVLALKVETIEG 543
[Close]
BLAST of mRNA_Ecto-sp9_F_contig957.17689.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC9_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.430e-5
Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 0 
Query:  605 LLYSLEKRWKPRVARIRAKGVTPCFHDHWKPIANRSPAKFDEWLTTLQ 652
            L+YSL+KRW+PRVA +R+  V P F  HW+P+A R    F  WL   Q
Sbjct:  562 LMYSLDKRWRPRVAHMRSLRVKPVFSAHWRPMATRDDESFGAWLEEQQ 609
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig957.17689.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized3.470e-19590.80protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.520e-13759.48protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 131... [more]
Uncharacterized2.430e-550.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..230
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 258..331
coord: 411..620
coord: 286..540
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 264..296
e-value: 1.5E-4
score: 31.1
coord: 301..333
e-value: 0.0024
score: 27.1
coord: 484..516
e-value: 2.6E-4
score: 30.3
coord: 412..443
e-value: 38.0
score: 13.2
coord: 338..368
e-value: 580.0
score: 5.7
coord: 595..626
e-value: 550.0
score: 5.9
coord: 375..407
e-value: 2.4E-4
score: 30.5
coord: 448..479
e-value: 1100.0
score: 3.7
coord: 558..590
e-value: 7.5E-4
score: 28.8
coord: 521..553
e-value: 6.5
score: 15.7
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 255..406
e-value: 2.5E-17
score: 62.8
coord: 472..625
e-value: 2.7E-19
score: 69.2
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 497..626
e-value: 1.7E-22
score: 81.9
coord: 219..386
e-value: 5.4E-22
score: 80.2
coord: 387..496
e-value: 5.4E-21
score: 76.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig957contigEcto-sp9_F_contig957:14627..18883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig957.17689.1mRNA_Ecto-sp9_F_contig957.17689.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig957 14270..18937 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig957.17689.1 ID=prot_Ecto-sp9_F_contig957.17689.1|Name=mRNA_Ecto-sp9_F_contig957.17689.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=653bp
MFAVQSAPSSGPPRPLIANFWDACPFLGARGGAEGIRGGIGDGRHGGSIG
GSTRLLRCFLSLPSSSLSPPSAAVDDSRNSRRRRSRSAKERHPVHGAVAC
QQVSSSGPTTAPAAAPAPETLPGWIGRLGLDEEEEEDLVAAFAALPEPPP
PAAADAKLVQATRELVVSMKGPKTEHVRQGKPKRRGRPRKNPSLVEVKES
SESQQRRDEKEMMRIEAENLANASKAAEAKELLNVPVEATAKSTTEERGR
WIQERLLLNDATLAKMMEFYPQCVSYRIVENLEPKLEWLQKELGLDDQAL
GKMMSTAPVILGLSVEANLKPKLKWMKDTLGLDKKASTRLVMAVPSVLIL
LQDTLDKKLAFLRGEELNLSDVEVKRIVRNSPSFFTFSVEENMRPKLAWL
RERMGLDAIGIRKLVGRSPRVLALKVETIEGKLMWLEGRLGTDRERVKRV
VMTFPPILSMALDTMDWKIVWLQKRLSLTQEQLITVIVKYPNLLAYSVED
NIEPTLTWLEEDLGLDASVAGMLVVRQPRLLSANLEHNLKNKVPWMVENL
NLPRDVVLKVITSYPDLLNLSTEKNLGPTIQFFYDEMGASKEEVSEVVAR
GGKALLYSLEKRWKPRVARIRAKGVTPCFHDHWKPIANRSPAKFDEWLTT
LQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf