prot_Ecto-sp9_F_contig9518.17650.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9518.17650.1
Unique Nameprot_Ecto-sp9_F_contig9518.17650.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length124
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9518.17650.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB9_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 5.910e-68
Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 0 
Query:    1 MCKTVVEDDGGGLFLNGTLVQRVLVKNVPTISPTDSTVDAATHSKLESLLFPIHLKGPLPGGDIKHRTLYIDDPREPSDQEAEAPGTVQLCAQTLDLISAPLDVRQHWSTY 111
            MCKTVVEDDGGGLFLNGTLVQRVLVKNVPTIS +D T+DAATHSKLESLLFPIHLKGPLPGGDIKHRTLYIDDPREPSDQEAEAPGTVQLCAQTLDLISAPLDVRQHW+T+
Sbjct:   54 MCKTVVEDDGGGLFLNGTLVQRVLVKNVPTISFSDGTIDAATHSKLESLLFPIHLKGPLPGGDIKHRTLYIDDPREPSDQEAEAPGTVQLCAQTLDLISAPLDVRQHWNTF 164
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BLAST of mRNA_Ecto-sp9_F_contig9518.17650.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA7_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.740e-16
Identity = 52/121 (42.98%), Postives = 68/121 (56.20%), Query Frame = 0 
Query:    1 MCKTVVEDDGGGLFLNGTLVQRVLVKNVPTISPTDSTVDAATHSKLESLLFPIHLKGPLPGGDIKHRTLYIDDPREPSDQEAEAPGTVQLCAQTLDLISAPLDVRQHWSTY-VRISCVAID 120
            +CKTVVEDD G L+LN T+VQRV ++    + P D           + LLF + +KGP  GG I  R   ++D R  S        TV +C +TLDL +APLDVRQHW+ +  RI    ID
Sbjct:   42 LCKTVVEDDQGALYLNATVVQRVPLETTRPMPPQDQLE--------KDLLFEMKVKGPSAGGGITSRRRSVEDVRGRSQP------TVMVC-ETLDLKTAPLDVRQHWNWFPFRILKATID 147
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9518.17650.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized5.910e-6894.59protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB9... [more]
Uncharacterized1.740e-1642.98protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9518contigEcto-sp9_F_contig9518:3170..3541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9518.17650.1mRNA_Ecto-sp9_F_contig9518.17650.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9518 3139..4116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9518.17650.1 ID=prot_Ecto-sp9_F_contig9518.17650.1|Name=mRNA_Ecto-sp9_F_contig9518.17650.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=124bp
MCKTVVEDDGGGLFLNGTLVQRVLVKNVPTISPTDSTVDAATHSKLESLL
FPIHLKGPLPGGDIKHRTLYIDDPREPSDQEAEAPGTVQLCAQTLDLISA
PLDVRQHWSTYVRISCVAIDPIP*
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