prot_Ecto-sp9_F_contig9506.17644.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9506.17644.1
Unique Nameprot_Ecto-sp9_F_contig9506.17644.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length125
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9506.17644.1 vs.
Match: Phosphotransferase (system component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW2_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 1.970e-52
Identity = 91/105 (86.67%), Postives = 93/105 (88.57%), Query Frame = 0 
Query:   21 TRHVLCGQVVHFLGYSKQFDATIDRLSCDLQPLHTFTRAWRDRLKAGSKVEVRVRGAFEYDDAIDHVDGARSKCVWEKGVVVQIGREIAGGDAGEDADSDETKQQ 125
            T HV     VHFLGYSKQFD TIDRLSCDLQPLHTFTRAWRDRLKAGSKVEVR RGAFE DDAI+HVD ARSKCVWE+GVVVQIGREIAG DAGEDAD DETKQQ
Sbjct:   24 TLHV--DDKVHFLGYSKQFDTTIDRLSCDLQPLHTFTRAWRDRLKAGSKVEVRARGAFENDDAINHVDAARSKCVWEEGVVVQIGREIAGDDAGEDADGDETKQQ 126
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9506.17644.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Phosphotransferase1.970e-5286.67system component n=1 Tax=Ectocarpus siliculosus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9506contigEcto-sp9_F_contig9506:1419..2665 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9506.17644.1mRNA_Ecto-sp9_F_contig9506.17644.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9506 1418..2665 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9506.17644.1 ID=prot_Ecto-sp9_F_contig9506.17644.1|Name=mRNA_Ecto-sp9_F_contig9506.17644.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=125bp
KNIAGGGTTCPRGLHQKGDSTRHVLCGQVVHFLGYSKQFDATIDRLSCDL
QPLHTFTRAWRDRLKAGSKVEVRVRGAFEYDDAIDHVDGARSKCVWEKGV
VVQIGREIAGGDAGEDADSDETKQQ
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