prot_Ecto-sp9_F_contig94.17559.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig94.17559.1
Unique Nameprot_Ecto-sp9_F_contig94.17559.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length185
Homology
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BLAST of mRNA_Ecto-sp9_F_contig94.17559.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Z6_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 9.800e-99
Identity = 160/173 (92.49%), Postives = 161/173 (93.06%), Query Frame = 0 
Query:   13 MVVVLVPLVDAFALGSSAGWHTHAVARPATRSTRSTXXXXXXXXXXXXXXXXEXXXXKSSGSKQQASGATSNAKWLQVLDSTSELEPGSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGD 185
            MVVVLVPLVDAFALGSSAGWHTHAVARPATRSTRS     XXXXXXXXXX  E    KSSGSKQQ SGATSNAKWLQVLDSTSELEPGSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTG+
Sbjct:    1 MVVVLVPLVDAFALGSSAGWHTHAVARPATRSTRSLTTMMXXXXXXXXXXYAEAKNKKSSGSKQQPSGATSNAKWLQVLDSTSELEPGSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGE 173
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BLAST of mRNA_Ecto-sp9_F_contig94.17559.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAQ7_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 5.700e-7
Identity = 40/100 (40.00%), Postives = 51/100 (51.00%), Query Frame = 0 
Query:   87 WLQVLDSTSELEP--GSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTG 184
            + +VLD  SEL    GS K V G  K +  +  +    G   A+   CGRCKFPL+ GKV        +ED  P VE D +  I I CPLC   F+L +G
Sbjct:  104 FTKVLDVGSELADAEGSQKAV-GPLKDDKFLLLIRRKEGRVSAIDANCGRCKFPLLKGKV--------SED--PSVEDDEDKGI-ITCPLCAVRFSLASG 191
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BLAST of mRNA_Ecto-sp9_F_contig94.17559.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USE0_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 2.300e-5
Identity = 32/111 (28.83%), Postives = 49/111 (44.14%), Query Frame = 0 
Query:   77 QASGATSNAKWLQVLDSTSELEP--GSVKVVS-GKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTG 184
            +  G+     W+QV +S  +++   G+ K V      G+     +  + G   +    CGRC+FPLINGK+                  D + E  I CPLCG  F+L +G
Sbjct:   83 EGEGSNYMGTWIQVFESDEDMDSKEGATKAVEITDPLGKPAPVLMIRHEGKISSTEIGCGRCQFPLINGKI-----------------MDQDGEPHIECPLCGCGFSLSSG 176
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig94.17559.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized9.800e-9992.49protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Z6... [more]
Uncharacterized5.700e-740.00protein n=2 Tax=Nannochloropsis gaditana TaxID=725... [more]
Hypothetical2.300e-528.83protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 83..185
e-value: 1.3E-7
score: 33.2
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 93..184
NoneNo IPR availablePANTHERPTHR21496:SF22coord: 72..184
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 72..184
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.929
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig94contigEcto-sp9_F_contig94:54258..58861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig94.17559.1mRNA_Ecto-sp9_F_contig94.17559.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig94 54258..58861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig94.17559.1 ID=prot_Ecto-sp9_F_contig94.17559.1|Name=mRNA_Ecto-sp9_F_contig94.17559.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=185bp
MSTSTRILALLSMVVVLVPLVDAFALGSSAGWHTHAVARPATRSTRSTTT
TMMAKKNRRERRYAEAKKNKSSGSKQQASGATSNAKWLQVLDSTSELEPG
SVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGG
GKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf