prot_Ecto-sp9_F_contig94.17556.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig94.17556.1
Unique Nameprot_Ecto-sp9_F_contig94.17556.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length226
Homology
BLAST of mRNA_Ecto-sp9_F_contig94.17556.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z2_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 2.280e-95
Identity = 159/176 (90.34%), Postives = 160/176 (90.91%), Query Frame = 0
Query:    1 MATESGSSSRVQKTTSSDGAAGSARTTRTDTGASSSGAVTLVSMDGDGFVVEASAIKVSKLLKAMVDGSTENAAKEIPLPNMRSNVVAKVVEFCQHHQTDPMTDIPKASAASYLLLTCIPVQFGKTVGDHVQEWYSTFVKALGDEMLFEMLLAANYLDLSPLLELCAATVGLRAMN 176
            MATESGSSSRVQKTTSSDGA GSARTTRTDTGASSSGAVTLVSMDGDGFVVEASAI+VSKLLKAMVDG TENAAKEIPL NMRSNVVAKVVEFCQHHQTDPMTDIPK            PVQFGKTVGDHVQEWYSTFVKAL DEMLFEMLLAANYLDLSPLLELCAATVGLRAMN
Sbjct:    1 MATESGSSSRVQKTTSSDGAVGSARTTRTDTGASSSGAVTLVSMDGDGFVVEASAIEVSKLLKAMVDGPTENAAKEIPLTNMRSNVVAKVVEFCQHHQTDPMTDIPK------------PVQFGKTVGDHVQEWYSTFVKALKDEMLFEMLLAANYLDLSPLLELCAATVGLRAMN 164          
BLAST of mRNA_Ecto-sp9_F_contig94.17556.1 vs.
Match: Skp1_POZ (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2N0_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 2.060e-56
Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 0
Query:    1 MATESGSSSRVQKTTSSDGAAGSARTTRTDTGASSSGAVTLVSMDGDGFVVEASAIKVSKLLKAMVDGSTENAAKEIPLPNMRSNVVAKVVEFCQHHQTDPMTDIPKASAA 111
            MATESGSSSRVQKTTSSDGAAGSARTTRTDTG +SSGAVTLVSMDGDGFVVEASAIKVSKLL AMVDGST+NA KEIPLPNMRSNVVAKVVEFCQH+QTDPMTDIPKA+ +
Sbjct:    1 MATESGSSSRVQKTTSSDGAAGSARTTRTDTGDASSGAVTLVSMDGDGFVVEASAIKVSKLLNAMVDGSTKNATKEIPLPNMRSNVVAKVVEFCQHYQTDPMTDIPKATCS 111          
BLAST of mRNA_Ecto-sp9_F_contig94.17556.1 vs.
Match: Skp1 (family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ49_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.300e-37
Identity = 70/151 (46.36%), Postives = 100/151 (66.23%), Query Frame = 0
Query:   33 ASSSGAVTLVSMDGDGFVVEASAIKVSKLLKAMVDGSTENAAKEIPLPNMRSNVVAKVVEFCQHHQTDPMTDIPKASAASYLLLTCIPVQFGKTVGDHVQEWYSTFVKALGDEMLFEMLLAANYLDLSPLLELCAATVGLRAMNARRDSAR 183
            A  +G VTLV+M GD F V+ + I +S++++ M++   E  A EIPLP +R  V+AKVV++C H+QT+PMT+IP+            P+++G+TV DHVQ WY+ FV AL  E LFE++L+ NYLD+ PLL+L +A  GL  MN   D  R
Sbjct:    9 ADGAGTVTLVAMGGDTFTVDRNVISLSQVIRVMLEDDGECVATEIPLPTVRGPVLAKVVDYCVHYQTEPMTEIPR------------PIKYGRTVADHVQPWYAEFVDALDKETLFELILSCNYLDVKPLLDLTSAVAGLMLMNKTPDEIR 147          
BLAST of mRNA_Ecto-sp9_F_contig94.17556.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW02_HETAK)

HSP 1 Score: 119 bits (298), Expect = 1.100e-29
Identity = 64/151 (42.38%), Postives = 95/151 (62.91%), Query Frame = 0
Query:   39 VTLVSMDGDGFVVEASAIKVSKLLKAMVDGST--ENAAKEIPLPNMRSNVVAKVVEFCQHHQTDPMTDIPKASAASYLLLTCIPVQFGKTVGDHVQEWYSTFVKALGD----EMLFEMLLAANYLDLSPLLELCAATVGLRAMNARRDSAR 183
            V L++ DGD F V    + +S+L+K M+D S   ++  +EIPLPN++SNV+ KV+EFC+++  D M  IP+            P+++G  V D VQ+WY  +V AL +    EMLF+++LAANYLD+  LL+L +AT+GL  MN   D  R
Sbjct:   40 VNLITQDGDSFTVSRDIVMISELIKTMIDESLGEDDDPQEIPLPNLKSNVLVKVIEFCKYYHKDKMATIPR------------PIKYGLQVADVVQDWYGEYVDALVNNKEFEMLFDLVLAANYLDIKSLLDLASATIGLLIMNKTPDQIR 178          
BLAST of mRNA_Ecto-sp9_F_contig94.17556.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK24_HETAK)

HSP 1 Score: 116 bits (291), Expect = 1.140e-28
Identity = 64/151 (42.38%), Postives = 92/151 (60.93%), Query Frame = 0
Query:   39 VTLVSMDGDGFVVEASAIKVSKLLKAMVDGSTENA--AKEIPLPNMRSNVVAKVVEFCQHHQTDPMTDIPKASAASYLLLTCIPVQFGKTVGDHVQEWYSTFVKALGD----EMLFEMLLAANYLDLSPLLELCAATVGLRAMNARRDSAR 183
            V L++ DGD F V    +++S+L++ M D S + +   +EIPLPN++S V+ KV+EFC+H+  + M  IP+            P+++G  V D VQ+WY  FV  L      EMLF+++LAANYLD+ PLL+L  ATVGL  MN   D  R
Sbjct:   38 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPE------------PIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIR 176          
BLAST of mRNA_Ecto-sp9_F_contig94.17556.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQM9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.760e-28
Identity = 64/135 (47.41%), Postives = 91/135 (67.41%), Query Frame = 0
Query:   37 GAVTLVSMDGDGFVVEASAIKVSKLLKAMVDGSTE-NAAKEIPLPNMRSNVVAKVVEFCQHHQTDPMTDIPKASAASYLLLTCIPVQFGKTVGDHVQEWYSTFVKALGDEMLFEMLLAANYLDLSPLLELCAATV 170
            G V LVS +GD F VEA   K+S+L+K M+    E +  +EIPLPN++S+V+ KV+EFC+H++ DPMT+I K   +S             T+ + VQEWY+TFV  +  E+LFE++LAANY+D+ PLL+L  ATV
Sbjct:   22 GNVQLVSQEGDNFQVEAKVAKMSELVKTMLPDEDEGDEVQEIPLPNVKSSVLGKVIEFCRHYKEDPMTEIEKPLKSS-------------TMSEVVQEWYATFVD-VEQEVLFELILAANYMDIKPLLDLTCATV 142          
BLAST of mRNA_Ecto-sp9_F_contig94.17556.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I6_9STRA)

HSP 1 Score: 113 bits (282), Expect = 8.110e-28
Identity = 63/140 (45.00%), Postives = 91/140 (65.00%), Query Frame = 0
Query:   32 GASSSGAVTLVSMDGDGFVVEASAIKVSKLLKAMV-DGSTENAAKEIPLPNMRSNVVAKVVEFCQHHQTDPMTDIPKASAASYLLLTCIPVQFGKTVGDHVQEWYSTFVKALGDEMLFEMLLAANYLDLSPLLELCAATV 170
            GA S   V LVS +GD + VE S  K+S+L+K M+ D    +  +EIPLPN+++NV+AKV+EFC+HH+ DPM DI K   ++              + + VQ+WY+ FV  +  E+LFE++LAANY+D+ PLL+L  ATV
Sbjct:    7 GAESGKVVHLVSQEGDQYEVEVSVCKMSELVKTMLPDDDDSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLKSA-------------NMHEVVQDWYANFVN-VDQELLFELILAANYMDIKPLLDLTCATV 132          
BLAST of mRNA_Ecto-sp9_F_contig94.17556.1 vs.
Match: Glycoprotein (fp21 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPG8_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.150e-26
Identity = 63/140 (45.00%), Postives = 91/140 (65.00%), Query Frame = 0
Query:   32 GASSSGAVTLVSMDGDGFVVEASAIKVSKLLKAMV-DGSTENAAKEIPLPNMRSNVVAKVVEFCQHHQTDPMTDIPKASAASYLLLTCIPVQFGKTVGDHVQEWYSTFVKALGDEMLFEMLLAANYLDLSPLLELCAATV 170
            GA S   V LVS +GD + VE S  K+S+L+K M+ D    +  +EIPLPN+++NV+AKV+EFC+HH+ DPM DI K   ++              + + VQ+WY+ FV  +  E+LFE++LAANY+D+ PLL+L  ATV
Sbjct:   55 GAESGKVVHLVSQEGDQYEVEVSVCKMSELVKTMLPDDDDSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLKSA-------------NMHEVVQDWYANFVN-VDQELLFELILAANYMDIKPLLDLTCATV 180          
BLAST of mRNA_Ecto-sp9_F_contig94.17556.1 vs.
Match: S-phase (kinase-associated protein 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJ29_FISSO)

HSP 1 Score: 108 bits (271), Expect = 2.920e-26
Identity = 61/135 (45.19%), Postives = 88/135 (65.19%), Query Frame = 0
Query:   39 VTLVSMDGDGFVVEASAIKVSKLLKAMVD---GSTENAAKEIPLPNMRSNVVAKVVEFCQHHQTDPMTDIPKASAASYLLLTCIPVQFGKTVGDHVQEWYSTFVKALGDEMLFEMLLAANYLDLSPLLELCAATV 170
            V L+S DGD F V     K+S+L+++M+D      EN++ EIPLPN++S V+ KV+EFCQHH  +PM +I K            P++  K + D VQ+WY+ FV+ L   +LFE++LAANY+D+ PLL+L  ATV
Sbjct:    8 VNLISKDGDSFPVSIGVAKMSELVRSMMDEDENEDENSSMEIPLPNVKSEVLQKVIEFCQHHLAEPMNEIEK------------PLKSQK-MSDVVQKWYADFVE-LEQVLLFELILAANYMDIKPLLDLTCATV 128          
BLAST of mRNA_Ecto-sp9_F_contig94.17556.1 vs.
Match: E3 (ubiquitin ligase complex SCF subunit scon-3 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DRF0_PHYNI)

HSP 1 Score: 106 bits (265), Expect = 2.220e-25
Identity = 60/133 (45.11%), Postives = 83/133 (62.41%), Query Frame = 0
Query:   39 VTLVSMDGDGFVVEASAIKVSKLLKAMVDGSTENA-AKEIPLPNMRSNVVAKVVEFCQHHQTDPMTDIPKASAASYLLLTCIPVQFGKTVGDHVQEWYSTFVKALGDEMLFEMLLAANYLDLSPLLELCAATV 170
            V LVSMDG+ F VEA    +SKL++ +VD   E    +EIPLPN++S+V+AKVVEFCQHH+  PMT+I K   ++ L              + V  W + FV+    E+LFE++LAANY+D+  LL+L  A V
Sbjct:    8 VKLVSMDGEAFEVEAKVAAMSKLVQTLVDDEQEGEEVQEIPLPNVKSHVLAKVVEFCQHHKDTPMTEIQKPLKSNVL-------------SESVDGWDAKFVEVTDHELLFELILAANYMDIKSLLDLSCAKV 127          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig94.17556.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.280e-9590.34protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Skp1_POZ2.060e-5691.89domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Skp12.300e-3746.36family, dimerization domain-containing protein n=1... [more]
Hypothetical1.100e-2942.38protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical1.140e-2842.38protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical1.760e-2847.41protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Uncharacterized8.110e-2845.00protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
Glycoprotein2.150e-2645.00fp21 n=1 Tax=Nannochloropsis gaditana TaxID=72520 ... [more]
S-phase2.920e-2645.19kinase-associated protein 1 n=1 Tax=Fistulifera so... [more]
E32.220e-2545.11ubiquitin ligase complex SCF subunit scon-3 n=7 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 222..225
NoneNo IPR availableGENE3D3.30.710.10coord: 33..185
e-value: 5.6E-29
score: 103.2
NoneNo IPR availablePANTHERPTHR11165SKP1coord: 39..171
IPR001232S-phase kinase-associated protein 1-likeSMARTSM00512skp1_3coord: 36..159
e-value: 4.6E-15
score: 66.0
IPR016073SKP1 component, POZ domainPFAMPF03931Skp1_POZcoord: 39..98
e-value: 2.0E-15
score: 56.7
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 39..101
IPR036296SKP1-like, dimerisation domain superfamilySUPERFAMILY81382Skp1 dimerisation domain-likecoord: 132..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig94contigEcto-sp9_F_contig94:9773..16098 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig94.17556.1mRNA_Ecto-sp9_F_contig94.17556.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig94 9555..17917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig94.17556.1 ID=prot_Ecto-sp9_F_contig94.17556.1|Name=mRNA_Ecto-sp9_F_contig94.17556.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=226bp
MATESGSSSRVQKTTSSDGAAGSARTTRTDTGASSSGAVTLVSMDGDGFV
VEASAIKVSKLLKAMVDGSTENAAKEIPLPNMRSNVVAKVVEFCQHHQTD
PMTDIPKASAASYLLLTCIPVQFGKTVGDHVQEWYSTFVKALGDEMLFEM
LLAANYLDLSPLLELCAATVGLRAMNARRDSARVQHQGAVFAGGGADITA
GKQVEHGAPNWQLAEKDERIRRKGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001232SKP1-like
IPR016073Skp1_comp_POZ
IPR011333SKP1/BTB/POZ_sf
IPR036296SKP1-like_dim_sf