prot_Ecto-sp9_F_contig9300.17464.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9300.17464.1
Unique Nameprot_Ecto-sp9_F_contig9300.17464.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length298
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9300.17464.1 vs.
Match: Similar (to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH6_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 4.110e-30
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0 
Query:    1 MSWMDLHQAAARGMVKRTSALPSRPLTNVDQRDNDGFTPLIAAAQEGHHNVVRVLLEHGAQVSMASYA 68
            MSW DLHQAAARGMV+RT AL SRPL NVDQRDNDGFTPLIAAAQEGHHNVVRVLLEHGAQ+SMASYA
Sbjct:    1 MSWTDLHQAAARGMVQRTLALLSRPLANVDQRDNDGFTPLIAAAQEGHHNVVRVLLEHGAQISMASYA 68
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BLAST of mRNA_Ecto-sp9_F_contig9300.17464.1 vs.
Match: EsV-1-199 (n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPY4_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 9.320e-10
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 0 
Query:    1 MSWMDLHQAAARGMVKRTSALPSRPLTNVDQRDNDGFTPLIAAAQEGHHNVVRVLLEHGAQVSMAS 66
            M +  LH AA +G  K T AL +    ++++R  DGFTPL  AAQEGHH V R+LL H A V++AS
Sbjct:    1 MPYNHLHDAALKGSAKVTEALLATAALDINERTEDGFTPLDVAAQEGHHRVARILLRHNASVTVAS 66
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BLAST of mRNA_Ecto-sp9_F_contig9300.17464.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN71_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 3.950e-6
Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 0 
Query:    5 DLHQAAARGMVKRTSALPSRPLTNVDQRDNDGFTPLIAAAQEGHHNVVRVLLEHGAQVSMA 65
            +LHQAA RG  +R ++L +R + N++Q D  G TPL+ AAQ+G   VV +LL  GA +S+A
Sbjct:   15 ELHQAAIRGSAERINSLLTRGVININQGDPAGRTPLMCAAQKGCPRVVGILLNKGANMSIA 75
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BLAST of mRNA_Ecto-sp9_F_contig9300.17464.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.540e-5
Identity = 27/58 (46.55%), Postives = 40/58 (68.97%), Query Frame = 0 
Query:    5 DLHQAAARGMVKRTSALPSRPLTNVDQRDNDGFTPLIAAAQEGHHNVVRVLLEHGAQV 62
            +LH+AA  G  +RT +L +    ++DQ D  G+TPL+ AA+EGH NV++VLL  GA +
Sbjct:   14 ELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASL 71
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BLAST of mRNA_Ecto-sp9_F_contig9300.17464.1 vs.
Match: ankyrin (repeat domain-containing protein n=1 Tax=Hydrogenophaga taeniospiralis TaxID=65656 RepID=UPI001CFA70B4)

HSP 1 Score: 56.6 bits (135), Expect = 3.060e-5
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 0 
Query:    4 MDLHQAAARGMVKRTSALPSRPLTNVDQRDNDGFTPLIAAAQEGHHNVVRVLLEHGAQVSMASYAG 69
            M +H AAA   +    AL  R   +VD + N G TPL+ AA EGH   VR+L+ HGA+VS+  + G
Sbjct: 1423 MPIHLAAASNYLGALQALLDRRPQDVDAKTNIGITPLMMAATEGHLEAVRLLVSHGAEVSLKDHDG 1488
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BLAST of mRNA_Ecto-sp9_F_contig9300.17464.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YIB8_DIALT)

HSP 1 Score: 53.9 bits (128), Expect = 3.600e-5
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0 
Query:    4 MDLHQAAARGMVKRT-SALPSRPLTNVDQRDNDGFTPLIAAAQEGHHNVVRVLLEHGAQVSMASYAG 69
            + L + A +G +     AL   P   V+QRD +GFTPL+ A  EGH  +VR+LLEHGA   ++++ G
Sbjct:   37 VKLGRLAEKGRIAELRDALIGAPDGAVNQRDANGFTPLLHACAEGHVEIVRLLLEHGASTEVSNFDG 103
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BLAST of mRNA_Ecto-sp9_F_contig9300.17464.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fusarium oxysporum f. sp. cepae TaxID=396571 RepID=A0A3L6MZP8_FUSOX)

HSP 1 Score: 50.8 bits (120), Expect = 7.190e-5
Identity = 26/58 (44.83%), Postives = 33/58 (56.90%), Query Frame = 0 
Query:    9 AAARGMVKRTSALPSRPLTNVDQRDNDGFTPLIAAAQEGHHNVVRVLLEHGAQVSMAS 66
            AA  G       L    + ++D RD DGFTPLIA +  GH  VV++LL+ GA V  AS
Sbjct:    2 AAGVGQESVVKLLLDTGIVDIDARDEDGFTPLIATSVNGHMEVVKMLLDKGADVMAAS 59
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9300.17464.1 vs.
Match: Uncharacterized (protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CF16_DIALT)

HSP 1 Score: 53.9 bits (128), Expect = 7.950e-5
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0 
Query:    4 MDLHQAAARGMVKRT-SALPSRPLTNVDQRDNDGFTPLIAAAQEGHHNVVRVLLEHGAQVSMASYAG 69
            + L + A +G +     AL   P   V+QRD +GFTPL+ A  EGH  +VR+LLEHGA   ++++ G
Sbjct:   18 VKLGRLAEKGRIAELRDALIGAPDGAVNQRDANGFTPLLHACAEGHVEIVRLLLEHGASTEVSNFDG 84
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BLAST of mRNA_Ecto-sp9_F_contig9300.17464.1 vs.
Match: Ankyrin (repeat family protein n=1 Tax=Orientia tsutsugamushi str. Gilliam TaxID=1359184 RepID=A0A0F3M9K2_ORITS)

HSP 1 Score: 50.8 bits (120), Expect = 9.320e-5
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0 
Query:    5 DLHQAAARGMVKRTSALPSRPLTNVDQRDNDGFTPLIAAAQEGHHNVVRVLLEHGAQVSM 64
            DLH AA +G + +   L  +   +V+ +D D  TPL  AA+EGH +VV+ LL HGA  S+
Sbjct:    5 DLHDAAKQGDINKVKHLILKENIDVNFQDEDKNTPLYCAAKEGHTDVVKWLLTHGADSSL 64
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9300.17464.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
Similar4.110e-3091.18to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosu... [more]
EsV-1-1999.320e-1050.00n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPY4_ECTSI[more]
EsV-1-1993.950e-647.54n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
EsV-1-1991.540e-546.55n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
ankyrin3.060e-543.94repeat domain-containing protein n=1 Tax=Hydrogeno... [more]
Hypothetical3.600e-541.79protein (Fragment) n=1 Tax=Diacronema lutheri TaxI... [more]
Uncharacterized7.190e-544.83protein n=1 Tax=Fusarium oxysporum f. sp. cepae Ta... [more]
Uncharacterized7.950e-541.79protein n=1 Tax=Diacronema lutheri TaxID=2081491 R... [more]
Ankyrin9.320e-543.33repeat family protein n=1 Tax=Orientia tsutsugamus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 84..98
score: 38.69
coord: 36..51
score: 40.29
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 68..97
e-value: 0.22
score: 20.6
coord: 35..64
e-value: 3.4E-5
score: 33.2
coord: 101..130
e-value: 2.9E-5
score: 33.5
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 101..130
e-value: 5.2E-4
score: 20.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 101..133
score: 10.927
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 68..100
score: 9.644
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 35..67
score: 13.17
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..158
e-value: 2.7E-38
score: 132.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..130
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 6..99
e-value: 5.4E-13
score: 49.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 6..133
score: 32.731
NoneNo IPR availablePANTHERPTHR24124FAMILY NOT NAMEDcoord: 3..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9300contigEcto-sp9_F_contig9300:2477..3897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9300.17464.1mRNA_Ecto-sp9_F_contig9300.17464.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9300 2477..3897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9300.17464.1 ID=prot_Ecto-sp9_F_contig9300.17464.1|Name=mRNA_Ecto-sp9_F_contig9300.17464.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=298bp
MSWMDLHQAAARGMVKRTSALPSRPLTNVDQRDNDGFTPLIAAAQEGHHN
VVRVLLEHGAQVSMASYAGCTALIMTAIHGQPVVATALLDAGADVNTSDI
NGCTALYCAANHGHLSVAKILLKNGAQPSLDTLTSSRSLFVQKPTLRTSW
FALLERQASSLSTWRPKMDTRRRRIPKGRANAPGRRGRCDVHLQLAWWDV
QIAPLPMREQHPQQVLSSPTRYRGATERAGGHPPLVVASGGDVRVLLALV
QQHSLHSACCRGGGRSLWNVEESKEGEDADFMAKDRSPPRAHASIVAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom