prot_Ecto-sp9_F_contig9267.17427.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9267.17427.1
Unique Name	prot_Ecto-sp9_F_contig9267.17427.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	339

Homology

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BLAST of mRNA_Ecto-sp9_F_contig9267.17427.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNU9_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 3.550e-141
Identity = 237/247 (95.95%), Postives = 242/247 (97.98%), Query Frame = 0

Query:   93 LRNEEHSRLQEMRLQHAEDVDNATRRRAATLASLTRRAELDREDWARRAKEGASAAGEEALRSEKQRLLKDRDKRIDAAIRRIQRERIENEETSKAEAEEEARVQEESHAQAKRLLAEKQGQWEERHSECTDALHSLVDTRRELALKSRELTAEQGILSLRVQKAEAANKEGASAARDEEAQVLKEHQELMSESRLRRAELKQKIKDHEAESAGMQARNRSESSRLREEHDERLEALHKEVKEKVTN 339
            LRNEEHSRLQEMRLQHAEDVD ATRRRAATLASLTR+AELDREDWARRAKEGASAAGEEALRSEKQRL+KDRDKRIDAAIRRIQRERIENEETSKAEAE+EARVQEESHAQAKRLLAEKQGQWEERHSECTD LHSLVDTRRELALKSRELTAEQGILSLRVQKAE ANKEGASAARDEEAQVLKEHQELMSESRLRRAEL+QK KDHEAESAGMQARNRSESSRLREEHDERLEALHKEVKEKV +
Sbjct:   11 LRNEEHSRLQEMRLQHAEDVDKATRRRAATLASLTRQAELDREDWARRAKEGASAAGEEALRSEKQRLMKDRDKRIDAAIRRIQRERIENEETSKAEAEKEARVQEESHAQAKRLLAEKQGQWEERHSECTDVLHSLVDTRRELALKSRELTAEQGILSLRVQKAEGANKEGASAARDEEAQVLKEHQELMSESRLRRAELEQKTKDHEAESAGMQARNRSESSRLREEHDERLEALHKEVKEKVAS 257

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9267.17427.1 vs.
Match: Novel (protein containing IQ calmodulin-binding motif n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV0_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 1.400e-27
Identity = 69/74 (93.24%), Postives = 71/74 (95.95%), Query Frame = 0

Query:    1 YQREAQRLRKQASLRADEALSEERARVRGRVEQARRQAMEAIGERRQALVDKHQADLERLRKRAAEEAEMQRRW 74
            + REAQRLRKQASLRADEALSEERARVRGRVEQARRQAMEAIGERRQAL DKHQADLERLRKRAAEEAE QRR+
Sbjct:  136 HHREAQRLRKQASLRADEALSEERARVRGRVEQARRQAMEAIGERRQALTDKHQADLERLRKRAAEEAETQRRY 209

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9267.17427.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9267.17427.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	3.550e-141	95.95	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Novel	1.400e-27	93.24	protein containing IQ calmodulin-binding motif n=1...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 168..207
None	No IPR available	COILS	Coil	Coil	coord: 50..85
None	No IPR available	COILS	Coil	Coil	coord: 17..37
None	No IPR available	COILS	Coil	Coil	coord: 319..339
None	No IPR available	COILS	Coil	Coil	coord: 276..310

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9267	contig	Ecto-sp9_F_contig9267:272..5331 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9267.17427.1	mRNA_Ecto-sp9_F_contig9267.17427.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9267 272..5331 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9267.17427.1 ID=prot_Ecto-sp9_F_contig9267.17427.1|Name=mRNA_Ecto-sp9_F_contig9267.17427.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=339bp
YQREAQRLRKQASLRADEALSEERARVRGRVEQARRQAMEAIGERRQALV
DKHQADLERLRKRAAEEAEMQRRWQEEEMRRLEGVCATDLTRLRNEEHSR
LQEMRLQHAEDVDNATRRRAATLASLTRRAELDREDWARRAKEGASAAGE
EALRSEKQRLLKDRDKRIDAAIRRIQRERIENEETSKAEAEEEARVQEES
HAQAKRLLAEKQGQWEERHSECTDALHSLVDTRRELALKSRELTAEQGIL
SLRVQKAEAANKEGASAARDEEAQVLKEHQELMSESRLRRAELKQKIKDH
EAESAGMQARNRSESSRLREEHDERLEALHKEVKEKVTN