prot_Ecto-sp9_F_contig9262.17424.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9262.17424.1
Unique Nameprot_Ecto-sp9_F_contig9262.17424.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length87
Homology
BLAST of mRNA_Ecto-sp9_F_contig9262.17424.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE2_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 9.770e-24
Identity = 56/85 (65.88%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    3 GRAYDLLSALMSPDNTVRRKAEVVWEDMKMRLPDEVLEIVCEMLGRG-GGDGDXXXXXXXXEGLRAMAAVLLRTLFDARSDVWFR 86
            G   +LL A  SPDN VRR+AE  WEDMKMRLPD+VLE VC +LG+  GG+G         EGLRAMAAVLLRTLFD RSDVWFR
Sbjct:    8 GGIGELLGAFTSPDNGVRRRAEEAWEDMKMRLPDQVLEQVCAVLGQADGGEGG--------EGLRAMAAVLLRTLFDIRSDVWFR 84          
BLAST of mRNA_Ecto-sp9_F_contig9262.17424.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD8_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.420e-22
Identity = 48/79 (60.76%), Postives = 56/79 (70.89%), Query Frame = 0
Query:    8 LLSALMSPDNTVRRKAEVVWEDMKMRLPDEVLEIVCEMLGRGGGDGDXXXXXXXXEGLRAMAAVLLRTLFDARSDVWFR 86
            LL+A  + DN  R++AEV WED+K RLPDEVLE +C +LGR   +           GLRAMAAVLLRTLFDARSDVWFR
Sbjct:   17 LLAAFTNADNEARQRAEVAWEDLKQRLPDEVLENMCAILGRDDAEAGEAA------GLRAMAAVLLRTLFDARSDVWFR 89          
BLAST of mRNA_Ecto-sp9_F_contig9262.17424.1 vs.
Match: Armadillo-type (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS9_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.780e-10
Identity = 40/88 (45.45%), Postives = 48/88 (54.55%), Query Frame = 0
Query:    1 MDGRAY--DLLSALMSPDNTVRRKAEVVWEDMKMRLPDEVLEIVCEMLGRGGGDGDXXXXXXXXEGLRAMAAVLLRTLFDARSDVWFR 86
            M G+A    LL+A M  DN  RR AE  W  +K   PD V E +C +L   G            EG+RAM+AVLLRTLF  RSD W+R
Sbjct:    1 MSGKAELEGLLAAFMGLDNEARRAAEERWASIKKSAPDGVAEGLCMILSSTG------ETQPAYEGIRAMSAVLLRTLFGIRSDFWYR 82          
BLAST of mRNA_Ecto-sp9_F_contig9262.17424.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW6_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 5.660e-7
Identity = 31/50 (62.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:   37 EVLEIVCEMLGRGGGDGDXXXXXXXXEGLRAMAAVLLRTLFDARSDVWFR 86
            +VLE VC +LG+  G           EGLRAMAAVLLRTLFD RSDVWFR
Sbjct:   47 QVLEQVCAVLGQADGG-------EVGEGLRAMAAVLLRTLFDIRSDVWFR 89          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9262.17424.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized9.770e-2465.88protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.420e-2260.76protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Armadillo-type1.780e-1045.45protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized5.660e-762.00protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9262contigEcto-sp9_F_contig9262:932..3960 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9262.17424.1mRNA_Ecto-sp9_F_contig9262.17424.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9262 690..3960 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9262.17424.1 ID=prot_Ecto-sp9_F_contig9262.17424.1|Name=mRNA_Ecto-sp9_F_contig9262.17424.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=87bp
MDGRAYDLLSALMSPDNTVRRKAEVVWEDMKMRLPDEVLEIVCEMLGRGG
GDGDAATGGGGGEGLRAMAAVLLRTLFDARSDVWFRA
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