prot_Ecto-sp9_F_contig8963.17153.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8963.17153.1
Unique Nameprot_Ecto-sp9_F_contig8963.17153.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length579
Homology
BLAST of mRNA_Ecto-sp9_F_contig8963.17153.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU0_ECTSI)

HSP 1 Score: 717 bits (1851), Expect = 1.380e-250
Identity = 436/490 (88.98%), Postives = 445/490 (90.82%), Query Frame = 0
Query:   89 LGITAGDGGAXXXXXXVQMPESCGAEKEEAEVDADDDGSNGKEEGGALFAEREEASGEGRAEGDASDGTAGLLTVETKDFGETSGGTTVVNNPAGAEHDDPLRPTLVVTARPSPLRAQLQSPITQDPSPCTSDGLHFAVSDGIPPDGGPGRDEAGQLPPSPQATAAVVKEGPRPPLHGNGGGFTGHVPPGVRIVGRTAAGKQAGAXXXXXXXXXXXXXXXALAGEAPTGRRDRPALSSSPSSVCSEXXXXXXXXXXXXXXXXXXXXXXXXXXDLSLWVTTRGSEEGGGEGAATPGDGATSPLPSPLSVRLSPVAVKILEDDDPGIDAGDGASNAVDLEEEGFGKDPGNGLGLGAKNALEARSGDGEGGASGEAENETEVLFEEEGATRCLLQPSEGPEAAEEAGGDNEDPETAVSQGEVESAAESLSGADVPLLDSSQTIPSTTAKTAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPPGGEGGQGGEK 578
            LG   G G         QMPESC AE+EEAEVDADDDG+NGKEEGGAL AEREE SGEGRAEG+ASDGTAGLLTVETKDFGE SGGTTVVNNPAGAEHDDPLRPTLVVTARPSPLRAQLQSPITQDPSPCTSDGLHFA+SDGIPPDGGPG D AG+LPPSPQAT AVV+EGPRPPLHGN         PGVRIVGRTAAGKQAGAXXXXXXXXXXXXXXXALAGEAPTGRRDR ALSSSPSSVCS XXXXXXXXXXXXXXXXXXXXXXXXXX   LWVTTRGSEEGGGEGAATPGDGA SPLPSPLSVRLSPVA K LEDDDPGIDAGDGASNAVDLEEE F KD  NGLGLGAKN LEARSGDGEGGASGEAENE EVL EEEGATRCLLQPSEGPEAAEEAGGDNEDPETAVSQGEVESAAESLSGA+VPLLDSS+TIPSTTA+TAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPPGGEGGQ GEK
Sbjct:  313 LGAGFGAGSRGASSSTRQMPESCAAEREEAEVDADDDGANGKEEGGALLAEREEVSGEGRAEGNASDGTAGLLTVETKDFGEMSGGTTVVNNPAGAEHDDPLRPTLVVTARPSPLRAQLQSPITQDPSPCTSDGLHFAISDGIPPDGGPGGDAAGRLPPSPQATGAVVREGPRPPLHGNXXXXXXXXXPGVRIVGRTAAGKQAGAXXXXXXXXXXXXXXXALAGEAPTGRRDRSALSSSPSSVCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWVTTRGSEEGGGEGAATPGDGAASPLPSPLSVRLSPVAAKSLEDDDPGIDAGDGASNAVDLEEEVFEKDLENGLGLGAKNGLEARSGDGEGGASGEAENEAEVLLEEEGATRCLLQPSEGPEAAEEAGGDNEDPETAVSQGEVESAAESLSGAEVPLLDSSKTIPSTTAETAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPPGGEGGQRGEK 802          
BLAST of mRNA_Ecto-sp9_F_contig8963.17153.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE12_9PHAE)

HSP 1 Score: 613 bits (1580), Expect = 1.230e-210
Identity = 385/535 (71.96%), Postives = 399/535 (74.58%), Query Frame = 0
Query:   41 SVASGGGSGCGDATAVVAQ-------DAGGLEQATTAPPPCDGKPKEAADEASGHLGITAGDGGAXXXXXXVQMPESCGAEKEEAEVDADDDGSNGKEEGGALFAEREEASGEGRAEGDASDGTAGLLTVETKDFGETSGGTTVVNNPAGAEHDDPLRPTLVVTARPSPLRAQLQSPITQDPSPCTSDGLHFAVSDGIPPDGGPGRDEAGQLPPSPQATAAVVKEGPRPPLHGNGGGFTGHVPPGVRIVGRTAAGKQAGAXXXXXXXXXXXXXXXALAGEAPTGRRDRPALSSSPSSVCSEXXXXXXXXXXXXXXXXXXXXXXXXXXDLSLWVTTRGSEEGGGEGAATPGDGATSPLPSPLSVRLSPVAVKILEDDDPGIDAGDGASNAVDLEEEGFGKDPGNGLGLGAKNALEARSGDGEGGASGEAENETEVLFEEEGATRCLLQPSEGPEAAEEAGGDNEDPETAVSQGEVESAAESLSGADVPLLDSSQTIPSTTAKTAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPP 568
            S  SGG + C   T+ V +       +  GLEQAT APP CDGKP+EAADEASG  G TAGDG  XXXXX VQ PESCGAEKEEA  DADD  +NGK E GALFAE EEASGEGRAEG ASDGTAGLLTVETKDFGETSG T VVNNPAG EHDDPLRPTLVVT+ PSPLRAQLQSPITQDPSPCTSD LHFAVSDGIPPDGGPG D AGQLPPSPQATAA V+E  R                GVRIVGRTAAG+Q GA  XXXXXXXXXX     AGEAP GRRDR ALSSSPSSVCSE                          DLSLWVTTRGS                SPLPSP SVRLSPVAVK LEDDDPGID GDGAS A +LEEE   KD  NGLG GAKNA+EARSGDGE GASGE ENE EVL E E AT CLLQPSEGPEAAEE GGDNEDPE AVSQGEVE+AAE  S ADVPLLDSS+TIPSTTA+TAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPP
Sbjct:  199 SPLSGGTAACFGKTSSVREPRCKLFDETDGLEQATMAPPLCDGKPEEAADEASGDGGFTAGDGXXXXXXXVVQ-PESCGAEKEEASADADDGRANGKAERGALFAEWEEASGEGRAEGYASDGTAGLLTVETKDFGETSGCTAVVNNPAGVEHDDPLRPTLVVTSSPSPLRAQLQSPITQDPSPCTSDSLHFAVSDGIPPDGGPGGDAAGQLPPSPQATAAAVREDSRXXXXXXXXXXXXXXXXGVRIVGRTAAGEQPGAASXXXXXXXXXX----XAGEAPAGRRDRAALSSSPSSVCSEGGGTGPPRGGEVKLFVSTPTGEGDSSDLSLWVTTRGSXXXXXXXXXXXXXXXXSPLPSPPSVRLSPVAVKSLEDDDPGIDPGDGASTAANLEEEDLEKDLRNGLGFGAKNAIEARSGDGEAGASGEEENEVEVLPEGE-ATCCLLQPSEGPEAAEEGGGDNEDPEPAVSQGEVENAAEGPSRADVPLLDSSKTIPSTTAETAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPP 727          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8963.17153.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.380e-25088.98protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.230e-21071.96protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8963contigEcto-sp9_F_contig8963:3061..5379 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8963.17153.1mRNA_Ecto-sp9_F_contig8963.17153.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8963 3061..5379 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8963.17153.1 ID=prot_Ecto-sp9_F_contig8963.17153.1|Name=mRNA_Ecto-sp9_F_contig8963.17153.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=579bp
KVSQEEPASSLLSLIGGYSSSSSSSSSGARRPRTTPSTLPSVASGGGSGC
GDATAVVAQDAGGLEQATTAPPPCDGKPKEAADEASGHLGITAGDGGAAA
AAAVVQMPESCGAEKEEAEVDADDDGSNGKEEGGALFAEREEASGEGRAE
GDASDGTAGLLTVETKDFGETSGGTTVVNNPAGAEHDDPLRPTLVVTARP
SPLRAQLQSPITQDPSPCTSDGLHFAVSDGIPPDGGPGRDEAGQLPPSPQ
ATAAVVKEGPRPPLHGNGGGFTGHVPPGVRIVGRTAAGKQAGAASGGGSD
GGGGGGGGALAGEAPTGRRDRPALSSSPSSVCSEGGGTGPPRGGEVKLFV
STPTGEGDASDLSLWVTTRGSEEGGGEGAATPGDGATSPLPSPLSVRLSP
VAVKILEDDDPGIDAGDGASNAVDLEEEGFGKDPGNGLGLGAKNALEARS
GDGEGGASGEAENETEVLFEEEGATRCLLQPSEGPEAAEEAGGDNEDPET
AVSQGEVESAAESLSGADVPLLDSSQTIPSTTAKTAANVEKTEVGGMEGP
WEAVARVFCGIFNFCRPPGGEGGQGGEK*
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