prot_Ecto-sp9_F_contig883.17011.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig883.17011.1
Unique Nameprot_Ecto-sp9_F_contig883.17011.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length306
Homology
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BLAST of mRNA_Ecto-sp9_F_contig883.17011.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY1_ECTSI)

HSP 1 Score: 534 bits (1375), Expect = 8.300e-191
Identity = 274/305 (89.84%), Postives = 278/305 (91.15%), Query Frame = 0 
Query:    1 MPPDELAASIRRCLNNMHGPEWHCVAGKVKAFSVHVRYWRGKSFLFEAEGLRIIVFQSAPPAPDDPLSSPQAHEQDAEAKQGPTAKGAERTSIKVLRSGMEQGYQKRVLAMASASAREHGKTGDLNSIVAALKASLTEFTGPVWHVMATRGAGDWGFSVAHEEGQLLDFKLNGDRILCWKHAQAAPGLTDMLTMKRISTFLFVATMLLLCVYVKLQGSCDRCCSSYPGAREKAGCAMAPTTSGGETGAGDIVVEGCDVDVTEAADICLRNAKIALFVTCGTMAGATALKWADRSKSKRQFKHQGA 305
            MPP+ELAASIRRCLNNM                     WRGKSFLFEAEGLRIIVFQSAPPAPDDPLSSPQAHEQDAEAKQGPTAKG ERTSIKVLRS MEQGYQKRVLAMASASAREHGKTGDLNSIVAALKASLTEFTGPVWHVMATRGAGDWGFSVAHEEGQLLDFKLNGDRILCWKHAQAAPGLTDMLTMKRISTFLFVATMLLLCVYVKLQGSCDRCCSSYPGAREKAGCA+APTTSGG  GAGDIVVEGCDVDVTE AD+CLRNAKIALFVTCGTMAGATA KWADRSK+KRQFKHQGA
Sbjct:    1 MPPEELAASIRRCLNNM---------------------WRGKSFLFEAEGLRIIVFQSAPPAPDDPLSSPQAHEQDAEAKQGPTAKGPERTSIKVLRSEMEQGYQKRVLAMASASAREHGKTGDLNSIVAALKASLTEFTGPVWHVMATRGAGDWGFSVAHEEGQLLDFKLNGDRILCWKHAQAAPGLTDMLTMKRISTFLFVATMLLLCVYVKLQGSCDRCCSSYPGAREKAGCAIAPTTSGGGAGAGDIVVEGCDVDVTEVADLCLRNAKIALFVTCGTMAGATAFKWADRSKAKRQFKHQGA 284
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BLAST of mRNA_Ecto-sp9_F_contig883.17011.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTS5_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 2.220e-54
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 0 
Query:    1 MPPDELAASIRRCLNNMHGPEWHCVAGKVKAFSVHVRYWRGKSFLFEAEGLRIIVFQSAPPAPDDPLSSPQAHEQDAEAKQGPTAKGAERT 91
            MPP+ELA SIRRCLNNMHGPEWHCVAGKVKAFSVHVRYWRGKSFLFEAEGLRIIVFQSAPPAPDDPLSSPQAHEQDAE KQGP+AKGAERT
Sbjct:   51 MPPEELAGSIRRCLNNMHGPEWHCVAGKVKAFSVHVRYWRGKSFLFEAEGLRIIVFQSAPPAPDDPLSSPQAHEQDAEPKQGPSAKGAERT 141
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig883.17011.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized8.300e-19189.84protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.220e-5495.60protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 88..181
e-value: 5.8E-4
score: 25.1
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 5..58
e-value: 2.6E-6
score: 27.6
coord: 93..180
e-value: 2.3E-12
score: 47.0
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 81..182
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 83..182
e-value: 8.4E-7
score: 30.9
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 3..59
e-value: 3.6E-6
score: 28.9
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 4..58
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 91..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..215
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 216..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig883contigEcto-sp9_F_contig883:21102..27772 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig883.17011.1mRNA_Ecto-sp9_F_contig883.17011.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig883 20670..27823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig883.17011.1 ID=prot_Ecto-sp9_F_contig883.17011.1|Name=mRNA_Ecto-sp9_F_contig883.17011.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=306bp
MPPDELAASIRRCLNNMHGPEWHCVAGKVKAFSVHVRYWRGKSFLFEAEG
LRIIVFQSAPPAPDDPLSSPQAHEQDAEAKQGPTAKGAERTSIKVLRSGM
EQGYQKRVLAMASASAREHGKTGDLNSIVAALKASLTEFTGPVWHVMATR
GAGDWGFSVAHEEGQLLDFKLNGDRILCWKHAQAAPGLTDMLTMKRISTF
LFVATMLLLCVYVKLQGSCDRCCSSYPGAREKAGCAMAPTTSGGETGAGD
IVVEGCDVDVTEAADICLRNAKIALFVTCGTMAGATALKWADRSKSKRQF
KHQGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf