prot_Ecto-sp9_F_contig10123.163.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10123.163.1
Unique Nameprot_Ecto-sp9_F_contig10123.163.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length488
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10123.163.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV59_ECTSI)

HSP 1 Score: 882 bits (2279), Expect = 0.000e+0
Identity = 476/487 (97.74%), Postives = 478/487 (98.15%), Query Frame = 0 
Query:    1 MKALIAFLGARVEHLASLKHVLPSLLGMADNDKDEWVQVVSGLVRQKLLPRDEDDSTNVGDEAKTSQSDFVLRKTVREVLERAKQNMSERAGNGKQRVVGGSTIGSNGDNRRMLEAPYFGPLEERYVSRKQQPRKQEFANAHFSVKYDFVSEFSEDLASNVGGTLNTSSSPTGGGASVAAAALASRVGQGGLLKTPGSFAPAPTPAAPNLAQARRVSLAAVVDPSAGSDGLRRTSKPLALSRNYVGLQHGSGRTSSGVGGARGTRGGGGAGPGKAGLMMINVDELQAIHAEKQSAREKAKGKPGRKKAKLEGGGEQSTAGMEPGTGASATGTQQVVANATDVGNTDGQLPEGASGEGKKAKPKAPAKPSATADGPMPVPQQGEIEAVAAMMVLGVAGGGEDAETSYLPEALTKLLENANSLRPEGKAKLESFFQKKMPEGSQQERVKYHEEVSPGADGEMMRVTSYIRLDYETWVWDRVHKKKRVKS 487
            MKALIAFLGAR EHLASL HVLPSLLGMAD+DKDEWVQVVSGLVRQKLLPRDEDDST+VGDEAKTSQSDFVLRKTVREVLERAKQNMSERAGNGKQRVVGGSTIG N D RRM EAPYFGPLEERYVSRKQQPRKQEFANAHFSVKYDFV EFSEDLASNVGGT NTSSSPTGGGASVAAAALASRVGQGGLLKTPGSFAPAPTPAAPNLAQARRVSLAAVVDPSAGSDGLRRTSKPLALSRNYVGLQHGSGRTSSGVGGARGTRGGGGA PGKAGLMMINVDELQAIHAEKQSAREKAKGKPGRKKAKLEGGGEQSTAGMEPGTGASATGTQQVVANATDVGNTDGQLPEGASGEGKKAKPKAPAKPSATADGPMPVPQQGEIEAVAAMMVLGVAGGGEDAETSYLPEALTKLLENANSLRPEGKAKLESFFQKKMPEGSQQERVKYHEEVSPGADGEMMRVTSYIRLDYETWVWDRVHKKKRVKS
Sbjct:    1 MKALIAFLGARKEHLASLNHVLPSLLGMADSDKDEWVQVVSGLVRQKLLPRDEDDSTSVGDEAKTSQSDFVLRKTVREVLERAKQNMSERAGNGKQRVVGGSTIGGNRDTRRMREAPYFGPLEERYVSRKQQPRKQEFANAHFSVKYDFVGEFSEDLASNVGGTSNTSSSPTGGGASVAAAALASRVGQGGLLKTPGSFAPAPTPAAPNLAQARRVSLAAVVDPSAGSDGLRRTSKPLALSRNYVGLQHGSGRTSSGVGGARGTRGGGGASPGKAGLMMINVDELQAIHAEKQSAREKAKGKPGRKKAKLEGGGEQSTAGMEPGTGASATGTQQVVANATDVGNTDGQLPEGASGEGKKAKPKAPAKPSATADGPMPVPQQGEIEAVAAMMVLGVAGGGEDAETSYLPEALTKLLENANSLRPEGKAKLESFFQKKMPEGSQQERVKYHEEVSPGADGEMMRVTSYIRLDYETWVWDRVHKKKRVKS 487
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10123.163.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized0.000e+097.74protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV59... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..487
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10123contigEcto-sp9_F_contig10123:2168..3631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10123.163.1mRNA_Ecto-sp9_F_contig10123.163.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10123 2165..4798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10123.163.1 ID=prot_Ecto-sp9_F_contig10123.163.1|Name=mRNA_Ecto-sp9_F_contig10123.163.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=488bp
MKALIAFLGARVEHLASLKHVLPSLLGMADNDKDEWVQVVSGLVRQKLLP
RDEDDSTNVGDEAKTSQSDFVLRKTVREVLERAKQNMSERAGNGKQRVVG
GSTIGSNGDNRRMLEAPYFGPLEERYVSRKQQPRKQEFANAHFSVKYDFV
SEFSEDLASNVGGTLNTSSSPTGGGASVAAAALASRVGQGGLLKTPGSFA
PAPTPAAPNLAQARRVSLAAVVDPSAGSDGLRRTSKPLALSRNYVGLQHG
SGRTSSGVGGARGTRGGGGAGPGKAGLMMINVDELQAIHAEKQSAREKAK
GKPGRKKAKLEGGGEQSTAGMEPGTGASATGTQQVVANATDVGNTDGQLP
EGASGEGKKAKPKAPAKPSATADGPMPVPQQGEIEAVAAMMVLGVAGGGE
DAETSYLPEALTKLLENANSLRPEGKAKLESFFQKKMPEGSQQERVKYHE
EVSPGADGEMMRVTSYIRLDYETWVWDRVHKKKRVKS*
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