prot_Ecto-sp9_F_contig1171.1424.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1171.1424.1
Unique Nameprot_Ecto-sp9_F_contig1171.1424.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length313
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1171.1424.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E9_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 5.880e-68
Identity = 175/205 (85.37%), Postives = 179/205 (87.32%), Query Frame = 0 
Query:   33 MPRLSLTFVTGLVALQSAAGASLRSSNGAAAADGRRLQEGLCNSIGCPGGFTPIPYAWEVECGDSCDVATCCEAXXXXXXXXXXXXXXXXXXXXXXXDDNCTTEQCCVSGDTGGGQ--GPLGGDGQGLYCNSIGCPGGYTPIPNAWEVECSGDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQ 235
            MPRLSLTFVTGLVALQSAAGASLRSSNGAAA DGRRLQEGLCNSIGCPGGFTPIP AWEVECG SCDVATCCE XXXXXXXXXXXXXXXXX      DD CTT QCCVSG+T  G+          GLYCNSIGCPGGYTPIPNAWEVEC  DSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSG+TG+GQ
Sbjct:    1 MPRLSLTFVTGLVALQSAAGASLRSSNGAAA-DGRRLQEGLCNSIGCPGGFTPIPNAWEVECGHSCDVATCCEXXXXXXXXXXXXXXXXXXGTTRCTDDYCTTPQCCVSGNTRKGEQXXXXXXXAGGLYCNSIGCPGGYTPIPNAWEVECYDDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGDTGDGQ 204
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BLAST of mRNA_Ecto-sp9_F_contig1171.1424.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY4_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 4.500e-58
Identity = 169/218 (77.52%), Postives = 171/218 (78.44%), Query Frame = 0 
Query:   25 MSALQQHRMPRLSLTFVTGLVALQSAAGASLRSSNGAAAADGRRLQEGLCNSIGCPGGFTPIPYAWEVECGDSCDVATCCEAXXXXXXXXXXXXXXXXXXXXXXXDDNCTTEQCCVSGDTGGGQGPLGGDGQG-LYCNSIGCPGGYTPIPNAWEVECSGDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPPAGVV 241
            M ALQQHRMPRLSLTFVTGLVALQSAAGASLRSSNGAAAADGRRLQEGLCNSIGCPGG+TPIPYAWEVECGDSCDVATCCEA XXXXXXXXXXXXXXXX      +DNCTTEQCCVSGD   GQGP      G LYCNSI                            EA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPPAGVV
Sbjct:    1 MDALQQHRMPRLSLTFVTGLVALQSAAGASLRSSNGAAAADGRRLQEGLCNSIGCPGGYTPIPYAWEVECGDSCDVATCCEAFXXXXXXXXXXXXXXXXGTIRCNNDNCTTEQCCVSGD---GQGPXXXXXGGVLYCNSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPPAGVV 215
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BLAST of mRNA_Ecto-sp9_F_contig1171.1424.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRN6_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 5.700e-54
Identity = 146/187 (78.07%), Postives = 149/187 (79.68%), Query Frame = 0 
Query:   68 RLQEGLCNSIGCPGGFTPIPYAWEVECGDSCDVATCCEAXXXXXXXXXXXXXXXXXXXXXXXDDNCTTEQCCVSGDTGGGQGPLGGDGQG-------------LYCNSIGCPGGYTPIPNAWEVECSGDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPPAGVV 241
            R+ EGLCNSIGCP GFTPIPYAWEVECGDSCDVATCCEA XXXXXXXXXXXXX         +DNCTTEQCCVSG+             G             LYCNSIGCPGGYTPIPNAWEVECSGDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPPAGVV
Sbjct:   10 RVHEGLCNSIGCPDGFTPIPYAWEVECGDSCDVATCCEAFXXXXXXXXXXXXXEDAGTTRCNNDNCTTEQCCVSGNXXXXXXXXXXXXGGNXXXXXXXXXXXVLYCNSIGCPGGYTPIPNAWEVECSGDSCEVSQCCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGNTGEGQPPAGVV 196
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1171.1424.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS1_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 2.710e-15
Identity = 35/41 (85.37%), Postives = 36/41 (87.80%), Query Frame = 0 
Query:  153 GDGQGLYCNSIGCPGGYTPIPNAWEVECSGDSCEVSQCCEA 193
            GDG+  YCNSIGCPGGYTPIPNAWEVEC  D CEVSQCCEA
Sbjct:    2 GDGK-TYCNSIGCPGGYTPIPNAWEVECDDDPCEVSQCCEA 41
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1171.1424.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized5.880e-6885.37protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.500e-5877.52protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.700e-5478.07protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.710e-1585.37protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 56..312
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..55
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1171contigEcto-sp9_F_contig1171:13354..16542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1171.1424.1mRNA_Ecto-sp9_F_contig1171.1424.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1171 13262..17862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1171.1424.1 ID=prot_Ecto-sp9_F_contig1171.1424.1|Name=mRNA_Ecto-sp9_F_contig1171.1424.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=313bp
MHRRGLIFGLHVLNFSLLFASLLRMSALQQHRMPRLSLTFVTGLVALQSA
AGASLRSSNGAAAADGRRLQEGLCNSIGCPGGFTPIPYAWEVECGDSCDV
ATCCEAFCSYHACPDNFIPIEDAGTIRCNDDNCTTEQCCVSGDTGGGQGP
LGGDGQGLYCNSIGCPGGYTPIPNAWEVECSGDSCEVSQCCEAYCSYYAC
PDSYIPIEDAGTTRCNNDDCTSEQCCVSGNTGEGQPPAGVVYCNSIGCPG
GYTPIPNAWEVECSGDSCEVSQCCEAYCSYYACPDNYIPIEDAGTTRCTN
DDCTSEQCCEFH*
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