mRNA_Ecto-sp9_F_contig1162.1355.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1162.1355.1
Unique NamemRNA_Ecto-sp9_F_contig1162.1355.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1162.1355.1 vs.
Match: Sart3 (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP0_ECTSI)

HSP 1 Score: 1028 bits (2657), Expect = 0.000e+0
Identity = 518/539 (96.10%), Postives = 528/539 (97.96%), Query Frame = 1
Query:    1 MEMDGEVASGGGGAVAPVSKAEQFALLKGAVKDCPGDYTAHLSLVKHLRGERPGSLELLKARQDFSERFPLSPELWQEWIDDRRAAGGEDGAEDVLALYCRAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGAGDGEISKARDRVKRVYRRQLSVPLIGNDESRLLEDMKEAFSGDDAGLKEVSQAHAKASKMLEARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGQPSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAVKNLPWSAELWCRHLRSLERSSEEAGAPSGEGTAGAEAAMRRVWKEALGSALPSPDEYVKVLLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSRAGIAQGLEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRRVQIEDELVEDMADLNLDGVAAESQARRQWDRVLRHSGKRLVSWEEAIKWERGSTGDLAACRRLYARSLNEVQDYPE 1617
            ME+DGEVASGGGGAVAP SKAEQFALLKGAVKDCPGDYTAHL LVKHLRGERPGSLELLKARQDFSERFPL PELWQEWIDDRRAAGGEDGAED+LALY RAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMG GDGEI+KARDRVKRVYRRQLSVPLIGNDESRLLEDMKEAFSGDDAGLKEV+QAHAKASKML ARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADG PSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAV+NLPWSAELWCR LRSLERSSEEAG PSGEGTAGAEAAMRRVWKEALGS+LPSPDEYVK+LLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSRAGIAQ LEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRR+QIEDELVED+ADL+LDGVAAESQARRQWDRVLRHSGKRLVSWEEAIKWER STGDLAACRRLYARSLNEVQDYPE
Sbjct:    1 MEVDGEVASGGGGAVAPASKAEQFALLKGAVKDCPGDYTAHLFLVKHLRGERPGSLELLKARQDFSERFPLGPELWQEWIDDRRAAGGEDGAEDILALYRRAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGVGDGEIAKARDRVKRVYRRQLSVPLIGNDESRLLEDMKEAFSGDDAGLKEVAQAHAKASKMLAARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGHPSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAVRNLPWSAELWCRRLRSLERSSEEAGGPSGEGTAGAEAAMRRVWKEALGSSLPSPDEYVKILLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSRAGIAQALEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRRIQIEDELVEDIADLDLDGVAAESQARRQWDRVLRHSGKRLVSWEEAIKWERRSTGDLAACRRLYARSLNEVQDYPE 539          
BLAST of mRNA_Ecto-sp9_F_contig1162.1355.1 vs.
Match: RRM (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q0_9STRA)

HSP 1 Score: 271 bits (692), Expect = 8.780e-76
Identity = 195/552 (35.33%), Postives = 279/552 (50.54%), Query Frame = 1
Query:   88 AVKDCPGDYTAHLSLVKHLRGERPGSLELLK-ARQDFSERFPLSPELWQEWIDDRRAAGGEDGAEDVLALYCRAFADYQCAKLWPGYLETLEASLDEDD-----------EGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGAGDGEISKARDRVKRVYRRQLSVPLIGNDESRLLEDMKEAFSGDDAGLKEVSQAHAKASKMLEARMEHEQAVKRCQEKDPGGPGEANA----WEAYAAMEAADG-QPSRAALALERAESEG-CCLHERIWVTHSDLLLAQMGAKD-----------------EEEKLTARAVKNLPWSAELWCRHLRSLERSSEEAGAPSGEGTAGAEAAMRRVWKEALGSALPSPDE-YVKVLLAYCASFRRRLLLAVDAVVKAKPL-PGTVEASTSDGARRSRAGIAQGLEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRRVQIEDELVEDMADLNLDGVAAES------QARRQWDRVLRHSGKRLVSWEEAIKWERGSTGDLAACRRLYARSLNEVQDYP 1614
            AVK  P  Y AHL+LV+ LR       E L+ AR+ F++ FPLSPELW +WI D +A GG   A DV ALY RAF DYQCA LWPGYLE L+   D +D           E   + +R+A E ALT VGVHP +G  VW +   FE +EL+D EE GA + E++  R R+  +  RQL+VPL GN+    +  +  A S D A   + + A  +A ++ EA    E              G+A+     W  Y   E A+  QP+RA    ERA SEG CCL +  W  ++DLLL  + AK                  +E ++  RAV+N+PWS+ LWCR LRS ER +     P  EG   A  A+  + ++AL S  P+P++ ++++L+A C   RR +  A  +    +P  P  +   T D A      +   ++ MR AF EA  F++  YP W+EGWL ++  +V+ E +LV+             +      +A++ W+  +    +   +W     W R   G  AACR L  R+L  +   P
Sbjct:   52 AVKANPRSYDAHLTLVQTLRTAGVEHREALRQARETFAKAFPLSPELWADWIADEKAGGGN--AADVKALYERAFKDYQCAALWPGYLELLDEMSDNEDLAAMEQGQAPEELSETELRQAHEAALTAVGVHPTVGPQVWAAYRTFEQDELQDLEETGASEDELAAVRTRIMALLSRQLTVPLPGNE---TVLQLAVALSQDLAA--DAASAEKEAKRLREAHRRTEA-------------GDASLALARWLEYCEFERAEERQPARAQFLYERALSEGGCCLFDTAWERYADLLLCDLKAKTXXXXXXXXXXXXXXXXAQELQVMRRAVRNVPWSSSLWCRLLRSEERCT-----PDAEGRVSAVLAV--LGEQALPSTFPTPEQDHLRLLMAGCDVARRAVAAATASAADVRPQHPSQM---TKDKAATL---VKDAVQRMREAFIEALGFLEHRYPRWEEGWLALLAYKVETEMQLVKPXXXXXXXXXXXXTSSDLRCEAKQDWEVAVNRWRQSAAAWLSYAAWLRTQPGGAAACRALLRRALTALSGEP 570          
BLAST of mRNA_Ecto-sp9_F_contig1162.1355.1 vs.
Match: squamous (cell carcinoma antigen recognized by T-cells 3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8923)

HSP 1 Score: 165 bits (418), Expect = 6.780e-40
Identity = 134/514 (26.07%), Postives = 241/514 (46.89%), Query Frame = 1
Query:  103 PGDYTAHLSLVKHLRGERPGSLELLKA-RQDFSERFPLSPELWQEWI-DDRRAAGGEDGAEDVLALYCRAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGAGDGE------ISKARDRVKRVYRRQLSVPLIGNDESRLLEDMKEAFSGDDAGLKEVSQAHAKASKMLEARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGQPSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAVKNLPWSAELWCRHLRSLERSSEEAGAPSGEGTAGAEAAMRRVWKEALGSALPSPDEYVKVLLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSRAGIAQGLEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRR-VQIEDELVEDMADLNLDGVAAESQARRQWDRVLRHSGKRLVSWEEAIKWERGSTGDLAACRRLYARSLNEVQDYPE 1617
            P  Y +HL L+K +R    G L+ L+  RQ+ S+ FPL+ ELW EWI D+   A   +  + +L+L+     DYQ  KLW  Y + +  +++ DD  G+S +R+ FE+A+   G+H   G ++W     FEM  L+  E+M   + +      I   ++RVK ++RRQ+++PL+G   +  + D ++    ++   + V QAHAKA   LE  + +E  V   +      P +   + +Y   E   G P+R     ERA  E C + + +W+ ++  L  ++        +  RA++N PW + LW  ++++LERS  +            E  M+    +AL     +  +Y+++   YC+  RR+                 ++  + D  +         ++A+R  F  A  +++ +Y G D     ++RR   +IE   + D+ +           A++ W++V+    + L  W E     R S   L+ CR++  R++    D PE
Sbjct:   44 PYKYDSHLQLIKLVRAS--GDLDKLREIRQNMSKIFPLTEELWLEWIKDELPLACLPEHRKMILSLFEHGVKDYQSVKLWIEYCQFIMDNMEGDD--GLSNVRDVFEKAIVAAGLHVTEGSSIWDGYRDFEMAILDSFEQMLTDENKNTMEEKIESQKERVKSLFRRQVAIPLLGMQGT--MRDFEDWVEDEEEIPEAVEQAHAKALAKLEEIIPYEDTVASAE------PPKLTEYRSYLEYEVKKGDPARIQCLYERAIKENCLVGD-LWIEYTGYLDTKLKMSSVVLPVYERALRNCPWVSVLWQNYMKALERSKAK------------ETTMKETLDKALTCGFTNAQDYLQLWHCYCSFLRRQ-----------------IQNWSPDNEQ---------VKALREGFQSAIDYIE-HYFGKDGDSTNLLRRYWARIEAFKMNDIEE-----------AQKLWEKVMTGHARELEYWLEYANLAR-SCRSLSLCRKILQRAVQSASDNPE 493          
BLAST of mRNA_Ecto-sp9_F_contig1162.1355.1 vs.
Match: Spliceosome (associated factor 3, U4/U6 recycling protein n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BQR5_9SAUR)

HSP 1 Score: 164 bits (414), Expect = 2.490e-39
Identity = 142/520 (27.31%), Postives = 229/520 (44.04%), Query Frame = 1
Query:  109 DYTAHLSLVKHLRGERPGSL-ELLKARQDFSERFPLSPELWQEWIDDR-RAAGGEDGAEDVLALYCRAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGAGDGEISKAR---------DRVKRVYRRQLSVPLIGNDESRLLEDMKEAFS-----GDDAGLKEVSQAHAKASKMLEARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGQPSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAVKNLPWSAELWCRHLRSLERSSEEAGAPSGEGTAGAEAAMRRVWKEALGSALPSPDEYVKVLLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSRAGIAQGLEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRRVQIEDELVEDMADLNLDGVAAESQARRQWDRVLRHSGKRLVS-WEEAIKWERGSTGDLAACRRLYARSLNEVQDYPE 1617
            DY  HL L+K L  E  G L +L +ARQ  SE FPL+ E+W +W+ D  R A      E +  L+ RA  DY C +LW  Y +     + +  EGG+  +R  FE ALT VG+H   G A+W +   FE   LE  +  G   G IS A          +++  ++RRQLS+PL+         DM+  ++      ++   +EV + + KAS+ +E    +E+A+   +            ++AY   E   G P+R  L  ERA ++ C + + +W+ ++  L  Q+  K+       RAV+N PW+  LW  +L +LER   E               +   ++ AL +      +YV++  AY    RRR+    D+  + + L               R+  A  +E ++   +E   F +   P        +++   +IE  L  +M            +AR  WD ++     +  + W E    ER   GD   CR+   R++    DYPE
Sbjct:   66 DYNCHLDLIKLLHQE--GELVKLRRARQKMSELFPLTEEIWLDWLKDEIRMASENSEREKIYELFERAVKDYICPELWLEYAQYSIGGIGQ--EGGIENVRSVFERALTAVGLHVSKGAAIWEAYREFENAILETMQPAG---GSISSAERQQATSAQLEKIXTLFRRQLSIPLL---------DMETTYAEYEEWSEEPVPEEVIKNYKKASQQMEKYKPYEEALLVAETPKLA------EYQAYIDFEMKAGDPARIQLIYERALADNCLVPD-LWLRYTQYLDRQLKVKELVLSAHERAVRNCPWTVRLWNHYLLALERHHVE------------HQLIAETFENALNAGFIQATDYVEIWQAYLDYLRRRVDFTQDSSKELEDL---------------RSAFAHAVEYLKQEVEER--FSESGDPS-----CTIMQTWARIEARLCNNM-----------QKARELWDHIMTKGNAKYANMWLEYYNLERAH-GDTQHCRKALHRAVQCTSDYPE 516          
BLAST of mRNA_Ecto-sp9_F_contig1162.1355.1 vs.
Match: Spliceosome (associated factor 3, U4/U6 recycling protein n=3 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J7UHC5_PIPKU)

HSP 1 Score: 162 bits (410), Expect = 8.640e-39
Identity = 145/517 (28.05%), Postives = 231/517 (44.68%), Query Frame = 1
Query:  109 DYTAHLSLVKHLRGERPGSLELLK-ARQDFSERFPLSPELWQEWIDDRRAAGGED-GAEDVLALYCRAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGAGDGEISKAR------DRVKRVYRRQLSVPLIGNDESRLLEDMKEAFS-----GDDAGLKEVSQAHAKASKMLEARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGQPSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAVKNLPWSAELWCRHLRSLERSSEEAGAPSGEGTAGAEAAMRRVWKEALGSALPSPDEYVKVLLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSRAGIAQGLEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRRVQIEDELVEDMADLNLDGVAAESQARRQWDRVLRHSGKRLVS-WEEAIKWERGSTGDLAACRRLYARSLNEVQDYPE 1617
            DY  HL L++ LR E  G L  L+ ARQ  SE FPL+ ELW EW+ D  +  G+    E V  L+ RA  DY C  +W  Y +     + +  +GG+  +R  FE AL+ VG+H   G A+W +   FE   +E A  M        + +      ++V  ++RRQL++PL          DM+  F+      +D   + V Q++ KA + LE    +E+A+   +      P  A  ++AY   E   G P+R  L  ERA  E C + + +W+ +S  L  Q+  KD    + +RAV+N PW+  LW R+L +LER   +               +   +++AL +      +YV++  AY    RRR+    D+  + + L               R+  A+ LE ++   +E   F +   P        +++   +IE  L  +M            +AR  WD ++     +  + W E    ER   GD   CR+   R++    DYPE
Sbjct:  115 DYNCHLDLIRLLRLE--GELTKLRGARQKMSEIFPLTEELWLEWLHDEISMAGDSRDREHVYDLFERAVKDYICPNIWLEYGQYSVGGIGQ--KGGLEKVRSVFERALSSVGLHMTKGLAIWEAYREFENAIVEAARPMAGFLSPFDREQTFDSQLEKVHSLFRRQLAIPLY---------DMEATFAEYEEWSEDPVPESVIQSYHKALQQLEKYKPYEEALLEAET-----PRLAE-YQAYIDFEMKIGDPARIQLIFERALVENCLVPD-LWIRYSQYLDRQLKVKDLVLSVHSRAVRNCPWTVALWSRYLLALERHGVD------------HQVISVTFEKALSAGFIQATDYVEIWQAYLDYLRRRVDFKQDSSKELEEL---------------RSAFARALEYLQQEVEER--FNESGDPS-----CMIMQNWARIEARLCNNM-----------QKARELWDSIMTKGNAKYANMWLEYYSLERAH-GDTQHCRKALHRAVQCTSDYPE 565          
BLAST of mRNA_Ecto-sp9_F_contig1162.1355.1 vs.
Match: Spliceosome (associated factor 3, U4/U6 recycling protein n=2 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670ZRT9_PSETE)

HSP 1 Score: 161 bits (408), Expect = 1.230e-38
Identity = 142/515 (27.57%), Postives = 226/515 (43.88%), Query Frame = 1
Query:  109 DYTAHLSLVKHLRGERPGSLELLKARQDFSERFPLSPELWQEWIDDRRAAGGEDGAEDVLALYCRAFADYQCAKLWPGYLETLEASL-DEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGAGDG-----EISKARDRVKRVYRRQLSVPLIGNDESRLLEDMKEAFSGDDAGLKE-----VSQAHAKASKMLEARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGQPSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAVKNLPWSAELWCRHLRSLERSSEEAGAPSGEGTAGAEAAMRRVWKEALGSALPSPDEYVKVLLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSRAGIAQGLEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRRVQIEDELVEDMADLNLDGVAAESQARRQWDRVL-RHSGKRLVSWEEAIKWERGSTGDLAACRRLYARSLNEVQDYPE 1617
            DY  HL+L+K +R E   +L +  AR++ SE FPL+ E+W +W+ D     G    E +  L+ RA  DY C ++W   LE  + S+ D   EGG++ +R   E A+  VG+H   G A+W +   FE   L   + +  G+      +++ ++ ++  VYRRQL +PLI         DM+  F    +   E     V Q++A+A K L+    +E A+   +      P  A  +EAY   E   G P+R  L  ERA  E C L   +W  ++  L  Q+  +        RAV+N PW+ ++WC +L +LER   E               +   ++ +L    P   +YV++  AY    RRR+    D+  + + L  T                AQ L  ++   D  E F +   P        +++   +IE     +M            +AR  WD ++ + + K    W E    ER   GD   CR+   R++    DYPE
Sbjct:   15 DYNTHLALIKIMRDESDFALPV--ARRNMSEIFPLTEEMWLDWLKDEIYKPGGSDREKIYELFERAVKDYICPQIW---LEYAQYSMGDIGTEGGIARVRAILERAIIEVGLHVTKGAAIWETYREFENAILATMQ-VSPGNAALELVQVTVSQRKIHSVYRRQLGIPLI---------DMEATFMEYQSWTDEPIPYAVRQSYARALKQLQKYKPYEDALLVAE-----APKLAE-YEAYIDFEMKIGDPARIQLIFERALKENC-LEPDLWTRYTQYLDRQLRVRSLVLPAHERAVRNCPWTVKMWCHYLMALERHRVE------------HQVISETFENSLRPGFPQAADYVEIWQAYLDYHRRRVDFTQDSSKELEELRST---------------FAQALNYLKQ--DVEERFNESGDPS-----CTIMQAWARIEARFCNNM-----------QKARELWDLIMVKGNAKYANMWLEYYNLERAH-GDTLHCRKALYRAVQCTHDYPE 461          
BLAST of mRNA_Ecto-sp9_F_contig1162.1355.1 vs.
Match: RRM (domain-containing protein n=6 Tax=Galeoidea TaxID=119195 RepID=A0A401PWS9_SCYTO)

HSP 1 Score: 160 bits (406), Expect = 1.530e-38
Identity = 144/520 (27.69%), Postives = 230/520 (44.23%), Query Frame = 1
Query:  109 DYTAHLSLVKHLRGERPGSLELLK-ARQDFSERFPLSPELWQEWIDDR-RAAGGEDGAEDVLALYCRAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGAG-----DGEISKAR-DRVKRVYRRQLSVPLIGNDESRLLEDMKEAFSGDDAGLKE----VSQAHAKASKMLEARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGQPSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAVKNLPWSAELWCRHLRSLERSSEEAGAPSGEGTAGAEAAMRRVWKEALGSALPSPDEYVKVLLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSRAGIAQGLEAMRGAF----DEAEAFVDKNYPGWDEGWLCVVRRRVQIEDELVEDMADLNLDGVAAESQARRQWDRVLRHSGKRLVS-WEEAIKWERGSTGDLAACRRLYARSLNEVQDYPE 1617
            DY  H+ L+K LR E  G LE L+ ARQ  SE FPL+ ELW +W+ D  R A      E+V  L+ +A  DY C ++W  Y +     + +  +GG+   R  F+ ALT VG+H   G A+W +   FE   L   +            E+  A+ DR+ ++++RQL VPL+         DM+  ++  +    E    V+Q + KA + +E R  +E+ +      DP    E   ++AY   E  DG P+R  +  ERA SE C + + +W   +  L  Q+  KD       RAV+N PW   LW R+L +LER   E               +   +++AL +      +YV++  A+    RRR+  + D+                          +Q LE +R AF    D  +  +++ +    +    +++   +IE  L +++            +AR  WDR++        + W E    ER   GD   CR+   R++    DYPE
Sbjct:   55 DYNCHVDLIKLLRQE--GELEKLRSARQKMSELFPLTEELWLDWLKDEIRMAEKASDRENVYELFEKAIKDYICPEIWLEYAQYSIGGIGQ--QGGIEKARGIFDRALTAVGLHMTKGVAIWEAFREFENAILGTLQPSAGSILTPEQQEMVNAQLDRIHKLFKRQLGVPLL---------DMETTYAEYEEWADEPDEFVTQVYKKAQQQMEKRKPYEENLLAA---DPPKLAE---YQAYIDFEVKDGDPARIQIIFERALSENCLVPD-LWARLTLYLDRQLKIKDLVVSAHERAVRNCPWIVGLWKRYLLALERHQAE------------HKIIIETFEKALNAGFIQATDYVELWQAFLDYLRRRVNFSQDS--------------------------SQELEELRSAFSRGVDYLKQDIEQRFGESGDPSCTILQNWARIEARLCKNI-----------QKARELWDRIMTKGNATYANMWLEYYNLERAH-GDPQHCRKALHRAVQCTTDYPE 504          
BLAST of mRNA_Ecto-sp9_F_contig1162.1355.1 vs.
Match: squamous (cell carcinoma antigen recognized by T-cells 3 isoform X1 n=2 Tax=Stenodermatinae TaxID=40234 RepID=UPI00187A4AE5)

HSP 1 Score: 161 bits (408), Expect = 1.550e-38
Identity = 147/517 (28.43%), Postives = 229/517 (44.29%), Query Frame = 1
Query:  109 DYTAHLSLVKHLRGERPGSLELLK-ARQDFSERFPLSPELWQEWIDDRRAAGGED-GAEDVLALYCRAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGA----GDGE--ISKARDRVKRVYRRQLSVPLIGNDESRLLEDMKEAFS-----GDDAGLKEVSQAHAKASKMLEARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGQPSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAVKNLPWSAELWCRHLRSLERSSEEAGAPSGEGTAGAEAAMRRVWKEALGSALPSPDEYVKVLLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSRAGIAQGLEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRRVQIEDELVEDMADLNLDGVAAESQARRQWDRVL-RHSGKRLVSWEEAIKWERGSTGDLAACRRLYARSLNEVQDYPE 1617
            DY  H+ L++ LR E  G L  ++ ARQ  SE FPL+ ELW EW+ D  +   +  G E V  L+ RA  DY C  +W  Y +     + +  +GG+  +R  FE AL+ VG+H   G A+W +   FE   +E    M       D E       ++V  ++RRQL+VPL          DM+  F+      +D   + V Q + KA + LE    +E+A+   +      P  A  ++AY   E   G P+R  L  ERA  E C + + +W+ +S  L  Q+  KD    +  RAV+N PW+  LW R+L ++ER   +               M   +++AL +      +YV++  AY    RRR+    D+  + + L               R+  A+ LE ++   +E   F +   P        +++   +IE  L  +M            +AR  WD ++ R + K    W E    ER   GD   CR+   R++    DYPE
Sbjct:  111 DYNCHVDLIRLLRLE--GELTKVRMARQKMSEIFPLTEELWLEWLRDETSMAPDGLGREHVYDLFERAVTDYLCPNIWLEYGQYSVGGIGQ--KGGLEKVRSVFERALSSVGLHITKGLAIWEAYREFESAIVEATRPMAGFLSPSDWEQTFDSQLEKVHSLFRRQLAVPLY---------DMEATFAEYEEWSEDPIPESVVQNYNKALQQLERYKPYEEALLEAE-----APRLAE-YQAYIDFELKVGDPARVQLIFERALVENCLVPD-LWIRYSQYLDRQLKVKDLVLSVHGRAVRNCPWTVALWSRYLLAMERHGVD------------HPVMAATFEKALSAGFIQATDYVEIWQAYLDYLRRRVDFRQDSSKELEEL---------------RSAFARALEYLKQEVEER--FNESGDPS-----CMIMQNWARIEARLCNNM-----------QKARELWDSIMTRGNAKYANMWLEYYNLERAH-GDTQHCRKALHRAVQCTSDYPE 561          
BLAST of mRNA_Ecto-sp9_F_contig1162.1355.1 vs.
Match: squamous (cell carcinoma antigen recognized by T-cells 3 n=1 Tax=Thamnophis elegans TaxID=35005 RepID=UPI001378E1EF)

HSP 1 Score: 161 bits (407), Expect = 1.980e-38
Identity = 142/522 (27.20%), Postives = 228/522 (43.68%), Query Frame = 1
Query:  103 PGDYTAHLSLVKHLRGERPGSLELLKARQDFSERFPLSPELWQEWIDDRRAAGGEDG-AEDVLALYCRAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGAG------DGEISKARDRVKRVYRRQLSVPLIGNDESRLLEDMKEAFSGDDAGLKE-----VSQAHAKASKMLEARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGQPSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAVKNLPWSAELWCRHLRSLERSSEEAGAPSGEGTAGAEAAMRRVWKEALGSALPSPDEYVKVLLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSRAGIAQGLEAMRGAFDEAEAF----VDKNYPGWDEGWLCVVRRRVQIEDELVEDMADLNLDGVAAESQARRQWDRVL-RHSGKRLVSWEEAIKWERGSTGDLAACRRLYARSLNEVQDYPE 1617
            P DY  ++ L+K LR ++     L +ARQ+ S+ FPL+ +LW EW+ D      ED   E +  L+ RA  DY C K+W  Y +     + +  EGG++ +R   E AL  VG+H   G A+W +   FE   L   +              +    +++  +YRRQL VPLI         DM+ AF   ++  +E       Q +AKA K L+    +E+A+   +        +   + AY   E   G P+R  L  ERA +E C L   +WV ++  L  Q+  K+       RAV+N PW+ +LW ++L ++ER   E              A+   +++AL +    P +YV++  AY    RRR+    D+                          ++ LE +R AF  A  +    V++ +    +    +++   +IE  L  +M            +AR  WD ++ + + K    W E    ER   GD   CR+   R++   QDYPE
Sbjct:   67 PYDYNCNVDLIKLLR-KKEDYYGLHRARQNMSKIFPLTEDLWLEWLKDEIELAREDSDREKIYELFERAVKDYICPKIWMEYAQYSIGGIGQ--EGGIAKVRAILERALIAVGLHVTKGAAIWETYREFENAMLATMQPPPGSVPTPEQQQNVKAQLEKIHSLYRRQLGVPLI---------DMESAFLEYESWSEEPIPQTALQNYAKALKQLQKYKPYEEALLVAEAP------KLYEYAAYIGFEVKLGDPTRIQLMYERALAENC-LVPHLWVHYTQYLDRQLKVKEVVLSAYERAVRNCPWAVKLWSQYLLAMERHRME------------HQAISETFEKALKAGFTQPTDYVEIWQAYLDYLRRRVDFTQDS--------------------------SKELEELRSAFGRAIKYLKQDVEERFNVSGDPSCSLMQAWARIEARLCNNM-----------QKARELWDFIMVKGNAKYANMWLEYYNLERAH-GDTLHCRKALYRAVQCTQDYPE 519          
BLAST of mRNA_Ecto-sp9_F_contig1162.1355.1 vs.
Match: squamous (cell carcinoma antigen recognized by T-cells 3 isoform X1 n=1 Tax=Perognathus longimembris pacificus TaxID=214514 RepID=UPI002019E74B)

HSP 1 Score: 160 bits (406), Expect = 2.780e-38
Identity = 147/518 (28.38%), Postives = 233/518 (44.98%), Query Frame = 1
Query:  109 DYTAHLSLVKHLRGERPGSLELLKA-RQDFSERFPLSPELWQEWIDDRRAAGGED-GAEDVLALYCRAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGA----GDGE--ISKARDRVKRVYRRQLSVPLIGNDESRLLEDMKEAFS-----GDDAGLKEVSQAHAKASKMLEARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGQPSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAVKNLPWSAELWCRHLRSLERSSEEAGAPSGEGTAGAEAAMRRVWKEALGSALPSPDEYVKVLLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSRAGIAQGLEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRR-VQIEDELVEDMADLNLDGVAAESQARRQWDRVLRHSGKRLVS-WEEAIKWERGSTGDLAACRRLYARSLNEVQDYPE 1617
            DY  H+ L+K LR E  G L+ ++A RQ  SE FPL+ ELW EW+ D  +   +D   E V  L+ RA  DY C  +W  Y +     + +  +GG+  +R  FE AL+ VG+H   G A+W +   FE   +E A  +       D E       ++V  ++RRQL++PL          DM+  F+      +D     V Q++ KA + LE    +E+A+ + +      P  A  +++Y   E   G P+R  L  ERA  E C + + +W+ +S  L  Q+  KD    + +RAV+N PW+A LW R+L ++ER   +               +   +++AL +      +YV++   Y    RRR+    D+  + + L               RA  A+ LE ++   +E   F +   P       CVV +   +IE  L  +M            +AR  WD ++     +  + W E    ER   GD   CR+   R++    DYPE
Sbjct:  104 DYNCHVDLIKVLRLE--GELDKVRAARQKMSEIFPLTEELWLEWLQDEISMAADDQDRERVYQLFERAVQDYICPNIWLEYGQYSVGGIGQ--KGGLDKVRSVFERALSSVGLHMTKGLAIWEAYREFESAIVEAARPIAGFLSPSDWEQTFDSQLEKVHSLFRRQLAIPLY---------DMETTFAEYEEWSEDPIPDSVIQSYHKALQQLEKYKPYEEALLQAE-----APRLAE-YQSYIDFEMKIGDPARIQLIFERALVENCLVPD-LWIRYSQYLDRQLKVKDLVLSVHSRAVRNCPWTAALWARYLLAMERHGAD------------HQDISATFEKALSAGFIQATDYVEMWQTYLDYLRRRVDFKQDSSKELEEL---------------RAMFARALEYLQQEVEER--FNENGDPS------CVVMQNWARIEARLCNNM-----------QKARELWDSIMTKGNAKYANMWLEYYNLERAH-GDTQHCRKALHRAVQCTSDYPE 554          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1162.1355.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Sart30.000e+096.10protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP0... [more]
RRM8.780e-7635.33domain-containing protein n=1 Tax=Tribonema minus ... [more]
squamous6.780e-4026.07cell carcinoma antigen recognized by T-cells 3 n=1... [more]
Spliceosome2.490e-3927.31associated factor 3, U4/U6 recycling protein n=1 T... [more]
Spliceosome8.640e-3928.05associated factor 3, U4/U6 recycling protein n=3 T... [more]
Spliceosome1.230e-3827.57associated factor 3, U4/U6 recycling protein n=2 T... [more]
RRM1.530e-3827.69domain-containing protein n=6 Tax=Galeoidea TaxID=... [more]
squamous1.550e-3828.43cell carcinoma antigen recognized by T-cells 3 iso... [more]
squamous1.980e-3827.20cell carcinoma antigen recognized by T-cells 3 n=1... [more]
squamous2.780e-3828.38cell carcinoma antigen recognized by T-cells 3 iso... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1162contigEcto-sp9_F_contig1162:50..8226 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1029.6
Seed ortholog evalue5.1e-298
Seed eggNOG ortholog2880.D8LJP0
EggNOG free text desc.positive regulation of histone deubiquitination
EggNOG OGsKOG0128@1,KOG0128@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, RanBP2-type
Ec32 orthologEc-17_002770.1
Exons10
Model size1617
Cds size1617
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1162.1355.1prot_Ecto-sp9_F_contig1162.1355.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1162 50..8226 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928419.9556696-CDS-Ecto-sp9_F_contig1162:49..2051622928419.9556696-CDS-Ecto-sp9_F_contig1162:49..205Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 50..205 -
1692277864.3167124-CDS-Ecto-sp9_F_contig1162:49..2051692277864.3167124-CDS-Ecto-sp9_F_contig1162:49..205Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 50..205 -
1622928419.9665053-CDS-Ecto-sp9_F_contig1162:1122..12421622928419.9665053-CDS-Ecto-sp9_F_contig1162:1122..1242Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 1123..1242 -
1692277864.3370178-CDS-Ecto-sp9_F_contig1162:1122..12421692277864.3370178-CDS-Ecto-sp9_F_contig1162:1122..1242Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 1123..1242 -
1622928419.9759429-CDS-Ecto-sp9_F_contig1162:1938..21331622928419.9759429-CDS-Ecto-sp9_F_contig1162:1938..2133Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 1939..2133 -
1692277864.350631-CDS-Ecto-sp9_F_contig1162:1938..21331692277864.350631-CDS-Ecto-sp9_F_contig1162:1938..2133Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 1939..2133 -
1622928419.9881878-CDS-Ecto-sp9_F_contig1162:2612..28161622928419.9881878-CDS-Ecto-sp9_F_contig1162:2612..2816Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 2613..2816 -
1692277864.359011-CDS-Ecto-sp9_F_contig1162:2612..28161692277864.359011-CDS-Ecto-sp9_F_contig1162:2612..2816Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 2613..2816 -
1622928420.0001285-CDS-Ecto-sp9_F_contig1162:3344..34941622928420.0001285-CDS-Ecto-sp9_F_contig1162:3344..3494Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 3345..3494 -
1692277864.3671129-CDS-Ecto-sp9_F_contig1162:3344..34941692277864.3671129-CDS-Ecto-sp9_F_contig1162:3344..3494Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 3345..3494 -
1622928420.0104136-CDS-Ecto-sp9_F_contig1162:4291..43781622928420.0104136-CDS-Ecto-sp9_F_contig1162:4291..4378Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 4292..4378 -
1692277864.3760211-CDS-Ecto-sp9_F_contig1162:4291..43781692277864.3760211-CDS-Ecto-sp9_F_contig1162:4291..4378Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 4292..4378 -
1622928420.0202398-CDS-Ecto-sp9_F_contig1162:4882..50301622928420.0202398-CDS-Ecto-sp9_F_contig1162:4882..5030Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 4883..5030 -
1692277864.3863137-CDS-Ecto-sp9_F_contig1162:4882..50301692277864.3863137-CDS-Ecto-sp9_F_contig1162:4882..5030Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 4883..5030 -
1622928420.0336292-CDS-Ecto-sp9_F_contig1162:5716..59011622928420.0336292-CDS-Ecto-sp9_F_contig1162:5716..5901Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 5717..5901 -
1692277864.3963332-CDS-Ecto-sp9_F_contig1162:5716..59011692277864.3963332-CDS-Ecto-sp9_F_contig1162:5716..5901Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 5717..5901 -
1622928420.049811-CDS-Ecto-sp9_F_contig1162:7065..72461622928420.049811-CDS-Ecto-sp9_F_contig1162:7065..7246Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 7066..7246 -
1692277864.406355-CDS-Ecto-sp9_F_contig1162:7065..72461692277864.406355-CDS-Ecto-sp9_F_contig1162:7065..7246Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 7066..7246 -
1622928420.061752-CDS-Ecto-sp9_F_contig1162:8035..82261622928420.061752-CDS-Ecto-sp9_F_contig1162:8035..8226Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 8036..8226 -
1692277864.416555-CDS-Ecto-sp9_F_contig1162:8035..82261692277864.416555-CDS-Ecto-sp9_F_contig1162:8035..8226Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1162 8036..8226 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1162.1355.1

>prot_Ecto-sp9_F_contig1162.1355.1 ID=prot_Ecto-sp9_F_contig1162.1355.1|Name=mRNA_Ecto-sp9_F_contig1162.1355.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=539bp
MEMDGEVASGGGGAVAPVSKAEQFALLKGAVKDCPGDYTAHLSLVKHLRG
ERPGSLELLKARQDFSERFPLSPELWQEWIDDRRAAGGEDGAEDVLALYC
RAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPV
LGGAVWRSLLRFEMEELEDAEEMGAGDGEISKARDRVKRVYRRQLSVPLI
GNDESRLLEDMKEAFSGDDAGLKEVSQAHAKASKMLEARMEHEQAVKRCQ
EKDPGGPGEANAWEAYAAMEAADGQPSRAALALERAESEGCCLHERIWVT
HSDLLLAQMGAKDEEEKLTARAVKNLPWSAELWCRHLRSLERSSEEAGAP
SGEGTAGAEAAMRRVWKEALGSALPSPDEYVKVLLAYCASFRRRLLLAVD
AVVKAKPLPGTVEASTSDGARRSRAGIAQGLEAMRGAFDEAEAFVDKNYP
GWDEGWLCVVRRRVQIEDELVEDMADLNLDGVAAESQARRQWDRVLRHSG
KRLVSWEEAIKWERGSTGDLAACRRLYARSLNEVQDYPE
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mRNA from alignment at Ecto-sp9_F_contig1162:50..8226-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1162.1355.1 ID=mRNA_Ecto-sp9_F_contig1162.1355.1|Name=mRNA_Ecto-sp9_F_contig1162.1355.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=8177bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1162:50..8226- (Ectocarpus species9 EcSCA_722f female)
ATGGAGATGGACGGCGAAGTTGCCAGTGGTGGTGGCGGCGCGGTCGCGCC GGTATCCAAAGCGGAGCAATTTGCCCTGCTGAAAGGAGCGGTGAAGGATT GTCCCGGCGACTACACGGCGCACTTGTCCCTCGTCAAGCACCTGCGGGGG GAGAGGCCTGGCAGCCTCGAGCTGCTCAAGGCCCGGCAAGAGTGAGTTTA CATGCGTTTATGTTTCTACTTATGCGGCGTTGCTCCTTCGACAATAGCGC GCGTGACGGCATGTTTATTCCTGAACCTGGATAAAGTTGACAGTCCCGTC GATCTAAGCTCCTGGTTGCCGTACCTGTTGGGTGGGTTGGTCACGGTGCG AAAGGAAGGAAAAAACTAGCGCTGTGATATGCCTGGCTTCTGTCTGGTAT TGCTGTGCTCGAGGTTCATTTTTTTATTATTTTCCCCACACATGATCGCA ATCCCACGCGCAAACCCAACAACATGTTTTGCCGTAACACCAAGGCAGTA CCACGGACAACATGGGAGGTCGAGACCAAGCAGACCAAATCAAGATCAAA TACAAAAGTGGTACCGAGCATTTGCATAACACCTTATTTTGCGCAACCCT GAGGTGACGTTTTTTTTACTTTTTTACTTGTATTATTGCTTCCTTCGCGG TTTTATCAGCAGCTACTACTGCTGTTGTACAGTGATCATACCCATGAAGC AAGCAGCCCCCTGTGGTTCTTGTCTTCGTCGTGGAGTATCCGAGCTCTAA CATTCGGTCCCAGGGGGTGTGGTACTCAACCTACGGTCTACGCGTGTGCA CCCGATTGTCCGTGCGGACGTCCCCCCGCGGCTGCACGCTCAACACATGT CTGACGGACAACACGGTCGCATGGATGAAAGAAAATGAAGCATCTCACAA GTGTTGGAGTTGTCCATGCATACGATCAGCAACAAGCAACTGCCCCCCTG CCCCGTTTCGGCCCAACTGTACGTGTTCAGTTTCTCCGAGAGGTTTCCGC TTAGCCCCGAGCTGTGGCAGGAGTGGATAGACGATCGCCGGGCGGCTGGG GGAGAGGATGGCGCGGAAGACGTCCTCGCTCTCTATTGCCGCGCGTTCGC GGATTACCAGTGCGCCAAGCTCTGGCCCGGGTACCTCGAGACGCTGGAAG CCTCGCTAGATGTAAGTTGACAGCAGTGATGCCTCCTTTTTTCTGCCTAT CTGGTGTTTTTGGGTGTTGGGGGCTGCGGAATGCCGTGTCGAGAGATGGT ACACACTCTTTTCGTGCAGCACTACCGCACCGCGAATCGTGCCTACAGTA TGCGTACAATTACGATTGTGGCGAACACACAAAGGGCAGATCCGCGATTT TGGACAACACGTTAAGGACCTCTGTGGACAGCCTGAATTGCTTTACTTGG ACAACGCGGCCCTGTTTCTTAGAGCCTACCGTTAGGGAGTATCTCTCTCG TCTTTTGGCAGGAGCTTGCGTTACTCTACTTGGCGCATTAGGCTGTCATC AGGTACGGGCGCCTCCAACGTACGTTAGCTCCAGCACGGTCACGATCCTA CTCCTCCAGAGCGTCAACCACCCCCCCCTTGCCTTCGAGTGTCGCTCATC CTTGGAACCCTTTCGTGTCCGACAAAGTGTCGCACATCTCCCACTAGCCT CCCATGTTTTTGGCCGTGATGACGGACGTCTCACCGTGGGAATCAAGCTA CATCACGCGGAAGAGAATATCTACGGCACCGCCAGACACGAGGCCCCAAC CCGGCTGAATACGACTTGCCGCGGGTAGCTGGGCTGACATGACGCGTTGT TTTCGATTTTTCATGTTCCCGTACGCTACTGCAGCTGCTGCTACTACTTC TACGGCTGCGGCTACTATTCACTGGCACCGTCACTGCCACGACGTCCACA TACCGGCGACAGAGACACGTTGTTATTTGATCGTCAGGGCCCTTCCTTGT CCTCCCATTTTGTCGTCAGTCTTGCGATACAACCAACACCCCCCTCAATC ACCACCACTGTGGAGCGTAGCCTTGCACACATGCGCACCAGTGCCTTGCG CGCATACTCGGGGTCCTGTCCTCTTGGCCCCAAAAGACTGCATACAGACG TGTAAATTTTTCCTTTTTGGTTCGTTCAGGTTCGCTGGGCTCTTTCGAGC CCAAAACACGTTCGAGCTTGGGAAACGTCGCTGATGGCAGCTGATTCGCA CGCTTTACTTTCGTCTTGCATCACGCCTTGGTGTATGCTCTGAGTTAGGC CACGCCGGAGGCGCGCCTCGTAACTTGTCTATTTGTTCGTTTGCTGCTGG CGTTGAAAAAATGATAAACCCGCAGGAAGACGACGAGGGTGGGGTTTCCG CCATGCGGGAGGCGTTCGAAGAAGCGCTGACTCGCGTGGGCGTCCACCCT GTCCTGGGAGGCGCGGTGTGGCGGTCGTTGTTACGGTTCGAGATGGAAGA GCTCGAGGACGCCGAGGAGATGGGCGCGGGAGACGGGGAGATTTCCAAGG CGCGGGATAGGTGAACATCCTCCGGGTCTGTTTTTGTTTGCCGCTTTGCT CTCTCTGTCTGCCTCTCTCGTTTCTCTCTGTCTGTCTGTCTGTCTGTCTG TCTGTCTGTCTGTCTGTCTGTCTTATCTGTTTGTCTGTCTCTCTCTGTTT GTGTCTCTGTCTCTGTGTCTCATGTCTCTCTTTCTCTGTCTCTGTCTGTG TCTCTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTTAATTTCGGGTCTGGTTTGTGGATCTT TGCCCTGGAGCGTTTCTGCACTGTGCGTGATTCACGTGTGTTTTTCCGAC CTGCATCCTGTGTCCTCTGGCCCTTCTGTATACGGTGCGATTCGTGGGTA TGCGTGGTTGAGCCCTGTGTACCAGCGCCGTTCTGCGTGTGCCCGCTTTT CCTCTCTGCCTGTCTCTATCTCTCTTGTCTTTCGTCTGCACCTCTCTCTC TCTTCCCGCCCTCTCAAGCACACACTGCTTGCATATTGTTTTTCTCTCTC TCACACATTGTCCGCATGCTCTTTTCCTGCTATTATAACGACCTCTCTTT CATTTACCGCCAACCGGCCGGCGCTGATGGTGTATATTTAAGAAACACAC ACACACATACACTCACACGCAAGCGATATGTCACTTCCTTCTGCAGAGTG AAGCGGGTGTACCGGAGGCAGCTCTCGGTCCCGCTGATCGGCAACGACGA AAGTCGTCTCCTCGAGGACATGAAGGAGGCCTTTTCAGGGGACGACGCGG GGCTCAAAGAGGTCTCCCAAGCACACGCCAAGGCCAGCAAGATGGTACTG ATGCTTTCTTGCTTCGGTGTGTGTTGAGATGGGCGGCAAAGGATACACCA TGTCGCAAGGTTCTTGAAATGTGTCGCTGTTGACATTGTAGTCTTATAAA AGTGGCCACTATTGTCTGAGGAAGGGGTGGGTATACCCAATTTTTTCCTA CTTCTATTTCCCAAAGGTTTTGTGCCGATGTGGGTGGTGCTCGTCGGGTT GTCCTCTTTCTTGCCTTTCTCTCCCACCACCGGGTGTTGTCCTCTCTGCG GGGCACGTGTGCTCGGGTTTTTTTGTTGGCATCAGTTGGGTGCTTGCCAG TCGATGACTCGTATTATTGATTTGTGTAAGTTGTGTTTTTTGTTGTTGTT GTTGTTGTCTTCACATTAGTAAACCGTTATGGAGTTTTGGGATTTTTTTC TCTGTCTTCACCCCTGGCGGACCAGGCCCATTGGTTTATTGAAAAACCAA ACGGCATATTTCCTCCCCTGCTGCCGCTTCCACCGCTGTGACGCCCAGCT GGAAGCACGGATGGAGCATGAGCAAGCAGTCAAGAGGTGTCAGGAGAAGG ACCCCGGGGGACCGGGGGAGGCAAACGCCTGGGAGGTGAGGGCAACTCCC GTTACCGCCATCTCCGCGGGTGCTTCGTAGCTATCACGACGGGGTTGTGT CTGTGGAGTTGTGTCTGGTTCTAGTAGGCGTTCGGCGTCTTCGTTTTTTG TTCTCTTGTCAATCCTGCTCGTTCTCTTGTTCCTGCTTTTTCAGGTACAG TGTGACTTGACCGTGGGACGTTCCACGGTTAGTATTTAGTTTCTTACCGG ACTCTGAGAGACTTCCTCTACGGAAGGCTGAAGCCATGATTTGTGTGTCC GGGTGTGCGTGAGCTGCGAGCATCTTACCAGCAGTCTTACGAATCTGTCG CACCTGCCTTTTACTGTTGAAAGAACCAACTGAAACCCATCACATACGAA AGAAGGGAACAGACGCACGCTCGTTTCAAACATACGTGTCTCCCGCTTCC AACTACCGCTAACGGCAGTTGTGAAGTTGGTTTCATGGCATATTCCCCAC GCAATCATGCTCCTGCAGCTCATTCGGAGCTTGCGCTTGTCGCCTCTGCT TGGTGGATAACGGAGAGCGGACCTTGACGGAACGGCAGATCAAAGTCAAC CGATTGGCGCCCTGTCGTCATCCGGAAATCTCCCGTAGGCACCCACGAAA GCATGCCCCTCACCCACCTCTTCAGAAACCCACACGGTGGCCAGATCAGT GATTGACACCTGAATTTTTTGTTTCAAGTGTCCTGCACACACTGCTCGCC GCGGTCGAACCACGGGCCGAAAATCAGCCAATCAGAACTGACCATTGTTG CTATACCGTCTTTCCGACGGGGTCGACGTCAGGCCTACGCCGCCATGGAG GCTGCGGACGGGCAGCCTTCGAGGGCCGCCCTGGCGCTGGAGCGCGCGGA GTCTGAGGGGTGTTGCCTCCATGAGCGGATCTGGGTCACCCACTCGGACC TGCTGCTGGCTCAGATGGGTGCCAAAGACGAGGTGTGGTGCACGGATGTG TCTGCACTTGAAAGTTTTCGCCCTCTTCTTCGCTCTTTTAGGGGCCGGCC CCACCCCCATGAGAACCGGAAGTCCATGTGAATGACCCCCGCCATTGACG CGGGCCGGCGAGACCGCTCCGATCGAAGGCATCGCCGATGGGCCAAAACC CCAACCGCGGCTTTGTTCGTGTTGTTTGTTTTGGTCCTTGTGTTGTGTGG GGGCCATGGTGGCGGTGTTTGCGGTTTGTCGTCCCCCCTGTTGCATGCCT TACCCCGGGAGCTTGGCAGGCTGAGGTCCGTAGCCTACTTTGACCGTCAC CTGCGCCACGCCGGTTCACATCACGACGTCGTCGTTTGTTTTTTTTTTGT GGAAAGGCACGCAAAACATGAGCGTGCCTCCTCTCGACCTTCAACGCCGG TTCAGCACGTCGTCGCCTTTCTGTATGAAGGCATGCAGAACATTAGTACG CCGCCCCCTCGGCCTTCGTCGGCTTTCCCCATCTACACGAAACGCGCTCC CCACACACAGGAGGAAAAGTTGACTGCGAGGGCGGTGAAGAACCTGCCCT GGTCGGCCGAGCTCTGGTGCCGACACCTCCGTTCTCTGGAACGTTCTTCG GAAGAAGCGGGGGCTCCTTCGGGCGAGGGCACGGCGGGGGCAGAGGCGGC GATGCGGAGGGTTTGGAAAGAGGCTCTGGGGAGCGCTCTCCCATCTCCCG ATGAATACGTCAAGGTACGATGTATTTGGGGGTGGTTTTGGAATTGTGGT AGTGATGTGGTACAGCCCTTCGGGCAGTCTAGAGACTAAACACGTTGGAT GCAAGAGAAATTTCTGGAGAGCCCGGTCAACGGTTGCGAATTTTCCAAGT ACCGGCGCGTTCGGATGCCGCTCTTTTGATTGTGTGACGGCGAAAGGAAA GCGACAGGCCTTGTGAAGAGCGACTTGTTCTTGCATCGAAGAGAAAGTCT TGGGATTCTTGTCCAGCAAGAACACCGCCGCGGAGTCTGCATTTTTGGCG CTCGCGTTTGATTTTCGGTCACGGTGCCAGCCTCTCCTTTTGATCGCTTC TGGTATGTGTATGTCTCTGATATGTATATGCAGTTTCGGCTCTGTAGGTT CGTACGAGAGACAGGCCCCAAACGACGAGCGCAGTACCGTGTTCTGGCTG CCATCCGCATCATCTCTGCTCTCATCGCCACTCACCCGCCCAGGTTCTTC TGGCCTACTGCGCCAGCTTCAGGCGGCGGCTTCTGCTCGCCGTAGACGCG GTGGTCAAGGCTAAGCCCTTACCGGGCACGGTCGAGGCGTCGACATCCGA CGGGGCGCGGCGGAGCAGAGCGGGCATCGCGCAGGGCTTGGAGGCGATGC GGGGGGCGTTCGACGAGGCGGAAGCGTTCGTGGACAAGGTGTGTGTGTGC ATGCGTGGGTCGGTCTGTCTGCCGCTCGGTTTTTTCCTTGATTCGGAGGG CGTGGGGAAGGTGTACTCAAAGCCGTGCATGTCGAAGTCGGTGGACTATT GACCTCGCATTCCTGCAAAGCCGGGAAGGAGCACGCCGGGTTCTCACCGG ACCAGGCTCTCATGTCACCAAGCGCGAGGCGCCGTGAGGTATTCGGCGAG TCGCATGAAGGCGTGTGCTAGTCCTCGTTCTTCGTGGGTAACGGAACAAG GTAACGCGGGAGTGGAGACGCTTTTCAGGAGTCTTGTTCGGGTGAAATCT GCCGCTTTTTCGGCGGCACATGGACACCCTCCTTTTCCTTCGTAGTGTTG CTCTAAGGGCGTGTGTGATTCCTTTCTGCCGATGCCCCGCCGTAAACTTG TCGTAGCAGCACCGCCGGCGGGGCAAGAAAATTATCCGTCTTTCTTTGGT GCTGGAGATTTCTCCGTCGCCAGGTGTTCTCGGTATCTCTTCGTCATTCT CTCCTGTCTCTAGTTCTATTCTCCCGCCTCCCCCCACTTTCCCTTCCTTC GCGCCCCTCTACGTTTCTGGCATCCACTCCAATGGCTCCCCTAGCTGCAT TCATCCCCACCGGATGGCGATGCCCCTATCAGTGGACACCCAGACCAGGG TAACATTTTCTCTCTCTCTTTGTTTTCTTGGCAGAACTACCCCGGGTGGG ACGAGGGCTGGCTCTGCGTTGTGCGGCGGCGCGTCCAGATCGAAGACGAG CTTGTGGAAGACATGGCCGACCTGAATCTGGACGGCGTCGCGGCGGAATC TCAGGTGTGTTGTCTGTTGCCTGACTCCCCCAGGAGGTACGCGGGCGGAC TCATACGTTTTGCATGCCTTAGTTGTTAGACCATTGAGAGCACACATGCT CTAGGGGACGTCGCGTTGTTCCCGCGTGACCGATCAAGGTGGCTACAAAT TGGTCTCCCTAACCTATGTATCCTGTCGGTATCACTTTTCTTCTTGTATC CCAGTATAGCAATCGTCTTCTTGGGGGGTGTATTTGGCGGCGAGAGAAGG GGGTTCGAGTGGCACCGGTGACGGGACATCTGCGTCATTTGCATCCATAC CGGGGAACACAAAATTTTATGGAAGTTCGGTTCCCATCAGGGCATGTATA CTTACAAGTCACCTTCTTTCGTCTGCTCGGCCTTTCCAAGAATGCAATGA CTTTTCCCCATTGTCAATTGAAAGAATCGGCCCAATCACGCTCGTTAGCA GCATGAGCCCAATTTTAACTGGACTTGCTTGCGGCGGGGGCTACAAAAAA TACACAGACCTACCCCACCGGTCATCAGTAGCCTTCACAGGGTTTTTGTA TTCGGGAAACATGTTGGATAAAGCATACAATCGGGGAAGTTGGGTTCGGG TTAGGGAATAGGGTCTGCGTACCCCCTCCCTGTTCTAGTTCCTTTTTATG CTGAATTTCTGGCGAAGGCGGTCCCCGGTCATACCCCATCGACGGATCCC CCCCCCCGTAAGTGTGTAAGCTCACCAGCAAAGAAACTAATAACCAGGAG TGAACAAACCAACATATTCATGTTTTTTTATCATTTATTTCAATCAGCGC TCACTGTCCCAGCATTTATCTAGACCAACAACAAAATCAATGCACAAAGC ATACAAACGAAAGCCAAAAAACAATTTTGACCCGTTTCGCCAACCGATCG CGACTTGCACGACCTCATCAGGCGCGGCGACAGTGGGATCGAGTCCTCCG CCACTCGGGCAAGCGCCTCGTCTCGTGGGAGGAGGCGATCAAGTGGGAGC GCGGCAGCACGGGGGACCTCGCCGCCTGCCGACGGCTGTACGCGAGAAGC CTGAACGAGGTCCAAGACTACCCAGAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1162:50..8226-

>mRNA_Ecto-sp9_F_contig1162.1355.1 ID=mRNA_Ecto-sp9_F_contig1162.1355.1|Name=mRNA_Ecto-sp9_F_contig1162.1355.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3234bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1162:50..8226- (Ectocarpus species9 EcSCA_722f female)
ATGGAGATGGACGGCGAAGTTGCCAGTGGTGGTGGCGGCGCGGTCGCGCC
GGTATCCAAAGCGGAGCAATTTGCCCTGCTGAAAGGAGCGGTGAAGGATT
GTCCCGGCGACTACACGGCGCACTTGTCCCTCGTCAAGCACCTGCGGGGG
GAGAGGCCTGGCAGCCTCGAGCTGCTCAAGGCCCGGCAAGAATGGAGATG
GACGGCGAAGTTGCCAGTGGTGGTGGCGGCGCGGTCGCGCCGGTATCCAA
AGCGGAGCAATTTGCCCTGCTGAAAGGAGCGGTGAAGGATTGTCCCGGCG
ACTACACGGCGCACTTGTCCCTCGTCAAGCACCTGCGGGGGGAGAGGCCT
GGCAGCCTCGAGCTGCTCAAGGCCCGGCAAGATTTCTCCGAGAGGTTTCC
GCTTAGCCCCGAGCTGTGGCAGGAGTGGATAGACGATCGCCGGGCGGCTG
GGGGAGAGGATGGCGCGGAAGACGTCCTCGCTCTCTATTGCCGCGCGTTC
GCGGATTACCAGTGCGCCAAGCTCTGGCCCGGGTACCTCGAGACGCTGGA
AGCCTCGCTAGATTTTCTCCGAGAGGTTTCCGCTTAGCCCCGAGCTGTGG
CAGGAGTGGATAGACGATCGCCGGGCGGCTGGGGGAGAGGATGGCGCGGA
AGACGTCCTCGCTCTCTATTGCCGCGCGTTCGCGGATTACCAGTGCGCCA
AGCTCTGGCCCGGGTACCTCGAGACGCTGGAAGCCTCGCTAGATGAAGAC
GACGAGGGTGGGGTTTCCGCCATGCGGGAGGCGTTCGAAGAAGCGCTGAC
TCGCGTGGGCGTCCACCCTGTCCTGGGAGGCGCGGTGTGGCGGTCGTTGT
TACGGTTCGAGATGGAAGAGCTCGAGGACGCCGAGGAGATGGGCGCGGGA
GACGGGGAGATTTCCAAGGCGCGGGATAGGAAGACGACGAGGGTGGGGTT
TCCGCCATGCGGGAGGCGTTCGAAGAAGCGCTGACTCGCGTGGGCGTCCA
CCCTGTCCTGGGAGGCGCGGTGTGGCGGTCGTTGTTACGGTTCGAGATGG
AAGAGCTCGAGGACGCCGAGGAGATGGGCGCGGGAGACGGGGAGATTTCC
AAGGCGCGGGATAGAGTGAAGCGGGTGTACCGGAGGCAGCTCTCGGTCCC
GCTGATCGGCAACGACGAAAGTCGTCTCCTCGAGGACATGAAGGAGGCCT
TTTCAGGGGACGACGCGGGGCTCAAAGAGGTCTCCCAAGCACACGCCAAG
GCCAGCAAGATGAGTGAAGCGGGTGTACCGGAGGCAGCTCTCGGTCCCGC
TGATCGGCAACGACGAAAGTCGTCTCCTCGAGGACATGAAGGAGGCCTTT
TCAGGGGACGACGCGGGGCTCAAAGAGGTCTCCCAAGCACACGCCAAGGC
CAGCAAGATGCTGGAAGCACGGATGGAGCATGAGCAAGCAGTCAAGAGGT
GTCAGGAGAAGGACCCCGGGGGACCGGGGGAGGCAAACGCCTGGGAGCTG
GAAGCACGGATGGAGCATGAGCAAGCAGTCAAGAGGTGTCAGGAGAAGGA
CCCCGGGGGACCGGGGGAGGCAAACGCCTGGGAGGCCTACGCCGCCATGG
AGGCTGCGGACGGGCAGCCTTCGAGGGCCGCCCTGGCGCTGGAGCGCGCG
GAGTCTGAGGGGTGTTGCCTCCATGAGCGGATCTGGGTCACCCACTCGGA
CCTGCTGCTGGCTCAGATGGGTGCCAAAGACGAGGCCTACGCCGCCATGG
AGGCTGCGGACGGGCAGCCTTCGAGGGCCGCCCTGGCGCTGGAGCGCGCG
GAGTCTGAGGGGTGTTGCCTCCATGAGCGGATCTGGGTCACCCACTCGGA
CCTGCTGCTGGCTCAGATGGGTGCCAAAGACGAGGAGGAAAAGTTGACTG
CGAGGGCGGTGAAGAACCTGCCCTGGTCGGCCGAGCTCTGGTGCCGACAC
CTCCGTTCTCTGGAACGTTCTTCGGAAGAAGCGGGGGCTCCTTCGGGCGA
GGGCACGGCGGGGGCAGAGGCGGCGATGCGGAGGGTTTGGAAAGAGGCTC
TGGGGAGCGCTCTCCCATCTCCCGATGAATACGTCAAGGAGGAAAAGTTG
ACTGCGAGGGCGGTGAAGAACCTGCCCTGGTCGGCCGAGCTCTGGTGCCG
ACACCTCCGTTCTCTGGAACGTTCTTCGGAAGAAGCGGGGGCTCCTTCGG
GCGAGGGCACGGCGGGGGCAGAGGCGGCGATGCGGAGGGTTTGGAAAGAG
GCTCTGGGGAGCGCTCTCCCATCTCCCGATGAATACGTCAAGGTTCTTCT
GGCCTACTGCGCCAGCTTCAGGCGGCGGCTTCTGCTCGCCGTAGACGCGG
TGGTCAAGGCTAAGCCCTTACCGGGCACGGTCGAGGCGTCGACATCCGAC
GGGGCGCGGCGGAGCAGAGCGGGCATCGCGCAGGGCTTGGAGGCGATGCG
GGGGGCGTTCGACGAGGCGGAAGCGTTCGTGGACAAGGTTCTTCTGGCCT
ACTGCGCCAGCTTCAGGCGGCGGCTTCTGCTCGCCGTAGACGCGGTGGTC
AAGGCTAAGCCCTTACCGGGCACGGTCGAGGCGTCGACATCCGACGGGGC
GCGGCGGAGCAGAGCGGGCATCGCGCAGGGCTTGGAGGCGATGCGGGGGG
CGTTCGACGAGGCGGAAGCGTTCGTGGACAAGAACTACCCCGGGTGGGAC
GAGGGCTGGCTCTGCGTTGTGCGGCGGCGCGTCCAGATCGAAGACGAGCT
TGTGGAAGACATGGCCGACCTGAATCTGGACGGCGTCGCGGCGGAATCTC
AGAACTACCCCGGGTGGGACGAGGGCTGGCTCTGCGTTGTGCGGCGGCGC
GTCCAGATCGAAGACGAGCTTGTGGAAGACATGGCCGACCTGAATCTGGA
CGGCGTCGCGGCGGAATCTCAGGCGCGGCGACAGTGGGATCGAGTCCTCC
GCCACTCGGGCAAGCGCCTCGTCTCGTGGGAGGAGGCGATCAAGTGGGAG
CGCGGCAGCACGGGGGACCTCGCCGCCTGCCGACGGCTGTACGCGAGAAG
CCTGAACGAGGTCCAAGACTACCCAGAGGCGCGGCGACAGTGGGATCGAG
TCCTCCGCCACTCGGGCAAGCGCCTCGTCTCGTGGGAGGAGGCGATCAAG
TGGGAGCGCGGCAGCACGGGGGACCTCGCCGCCTGCCGACGGCTGTACGC
GAGAAGCCTGAACGAGGTCCAAGACTACCCAGAG
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