prot_Ecto-sp9_F_contig1123.1061.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1123.1061.1
Unique Nameprot_Ecto-sp9_F_contig1123.1061.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length429
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1123.1061.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK91_ECTSI)

HSP 1 Score: 642 bits (1655), Expect = 6.650e-230
Identity = 340/389 (87.40%), Postives = 344/389 (88.43%), Query Frame = 0 
Query:    1 MTGWNNVAFMHLCLATYFSPPDLVCLILTSRDALETYGNAETYRAVCKSYFGLAGRRGHLTRRQRGKKGVWGAGDGAKARLSLLWQERTRNNVLQLQNAHLLQQREHERRWVLQQAAAVMRRCAYSSRQQGSGCAHTKLRLWTSANLVATKSSSRTSQERPPSHHGVRCDRCKKGPITGSCFRCAAGCAATAVPNDTSRCPPHGGESGIANGVSRGVRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTPKKGHGGASGGSGSCGFGNGFYTLCEACFPYRHQFHPPHPFARLRPGFAEPRLSGPVLYEAVCGDCSFGSLILVRPLKAREAAPGDTGSGDGGDLWAVPVRVDSAGPLPLSQARILHFTLLGARV 389
            MTGWNNVAFMHLCLATYFSPPDLVCLILTSRDAL+TYGNAETYRAVCKSYFGLAGRRGHLTRRQRGKKGVWGAGDGAKARLSLLWQERTRNNVLQLQNAHLLQQREHERRWVLQQAAAVMRRCAY SRQQGSGCAHTKLRLWTSANLVATKSSSR SQERPPSHHGVRCDRCKKGPITGSCFRCAAGC ATAVPNDTS+CPPHGG+SG+ANGVSRGVRRXXXXXXXXX                       XXXXXXXXXX                 CGFGNGFYTLCEACFPYRHQFHPPHPFARLRPGFAEPRLSGPVLYEAVCGDCSFGSLILVRPLKAREAAPGDTGSGDGGDLWAVPVRVDSAGPLPLSQAR LHF LLGARV
Sbjct:    1 MTGWNNVAFMHLCLATYFSPPDLVCLILTSRDALDTYGNAETYRAVCKSYFGLAGRRGHLTRRQRGKKGVWGAGDGAKARLSLLWQERTRNNVLQLQNAHLLQQREHERRWVLQQAAAVMRRCAYGSRQQGSGCAHTKLRLWTSANLVATKSSSRRSQERPPSHHGVRCDRCKKGPITGSCFRCAAGCTATAVPNDTSKCPPHGGKSGVANGVSRGVRRXXXXXXXXXEKPSPLSTILPRSSGEAPAREERXXXXXXXXXX-----------------CGFGNGFYTLCEACFPYRHQFHPPHPFARLRPGFAEPRLSGPVLYEAVCGDCSFGSLILVRPLKAREAAPGDTGSGDGGDLWAVPVRVDSAGPLPLSQARNLHFALLGARV 372
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1123.1061.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized6.650e-23087.40protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK91... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.559
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 158..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1123contigEcto-sp9_F_contig1123:20038..24490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1123.1061.1mRNA_Ecto-sp9_F_contig1123.1061.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1123 19960..25462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1123.1061.1 ID=prot_Ecto-sp9_F_contig1123.1061.1|Name=mRNA_Ecto-sp9_F_contig1123.1061.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=429bp
MTGWNNVAFMHLCLATYFSPPDLVCLILTSRDALETYGNAETYRAVCKSY
FGLAGRRGHLTRRQRGKKGVWGAGDGAKARLSLLWQERTRNNVLQLQNAH
LLQQREHERRWVLQQAAAVMRRCAYSSRQQGSGCAHTKLRLWTSANLVAT
KSSSRTSQERPPSHHGVRCDRCKKGPITGSCFRCAAGCAATAVPNDTSRC
PPHGGESGIANGVSRGVRRRHQQQQQQHEKPSPPSTILPRSSGEAPAREE
REERTGGGGSSSGTPKKGHGGASGGSGSCGFGNGFYTLCEACFPYRHQFH
PPHPFARLRPGFAEPRLSGPVLYEAVCGDCSFGSLILVRPLKAREAAPGD
TGSGDGGDLWAVPVRVDSAGPLPLSQARILHFTLLGARVKSRIAAGDRDD
NRGLAFASDNWQLQQGGRGVALESLDSP*
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