mRNA_Ecto-sp9_F_contig11026.902.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig11026.902.1
Unique NamemRNA_Ecto-sp9_F_contig11026.902.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig11026.902.1 vs.
Match: ATP-dependent (DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 680 bits (1755), Expect = 1.030e-222
Identity = 331/363 (91.18%), Postives = 339/363 (93.39%), Query Frame = 3
Query:  918 DHRAHEPLFRSGSPLAQQLTQRI-RSGSNNTGSRPCWYAKQQELQAIFATRGCATLFFTFSAADTHWDGLFDLMPPGYQDSPAGKRRALIENPHIADTYFGSRADAFTSAFFGGVLQTQSLWYRLEYQGRGSTHAHGCAWLQDDPGNVDLVCKAYGGRKAAERLEAAEGLAAGQGGISDEEERQALERAVADGKTADSKVCRYADWLISTVNTRSPEERAAHPWGVPDRHPCSVNPFKHGPVSDEAAGRADIDGLINCYQRHVSRPEGYCKRASRQGCRFGFPHECQPETSLQFEEMDNGSVRATIKTKRNDGNLNSYGRLALSRWRANIDFQLILDWDQAVRYMVKYLSKGEKRSPAAADVF 2003
            +H  H  LFRSGSPLAQQLTQR+ R G+N TGSRP WYAKQQELQAIFAT+GCATLFFT SAADTHWDGLFDLMPPGYQDSPAGKRRALIENPHIADTYFG+RADAFTSAFFGGVLQ QSLWYRLEYQGRGSTHAHGCAWLQDDPG V+LVCKAY GRKAAER+EAAEGLAAGQGGI DEEERQALERAVADGKTAD KVCRYADWLI TVNTRS EERAAHP GVPD HPCSVNPFKHGPVSDEA GRADIDGLINC QRHV RPEGYCKRA RQGCRFGFPHECQPETSLQFEEMDNGSVRATIKTKRNDGNLNSY RLALS WRANIDFQLILDWDQAVRYMVKY+SKGEKRSPAAADVF
Sbjct:  445 EHMRH--LFRSGSPLAQQLTQRMCRYGANITGSRPYWYAKQQELQAIFATKGCATLFFTLSAADTHWDGLFDLMPPGYQDSPAGKRRALIENPHIADTYFGNRADAFTSAFFGGVLQAQSLWYRLEYQGRGSTHAHGCAWLQDDPGIVNLVCKAYAGRKAAERMEAAEGLAAGQGGIGDEEERQALERAVADGKTADDKVCRYADWLICTVNTRSTEERAAHPGGVPDPHPCSVNPFKHGPVSDEATGRADIDGLINCCQRHVCRPEGYCKRAGRQGCRFGFPHECQPETSLQFEEMDNGSVRATIKTKRNDGNLNSYCRLALSHWRANIDFQLILDWDQAVRYMVKYVSKGEKRSPAAADVF 805          
BLAST of mRNA_Ecto-sp9_F_contig11026.902.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE)

HSP 1 Score: 360 bits (925), Expect = 7.560e-113
Identity = 186/202 (92.08%), Postives = 190/202 (94.06%), Query Frame = 1
Query:    1 YSCPRCKKDK------TADNDMDPGSVPVELKGLTQTEEMLIARCCPIMRVLHLKRGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALLWLIANNPYYRHIVLDDTALSQLPVDGQLRGLRATVSGGDSERDLGPRGEGGGAEDGDTPEDTESFMAPAGKSMLEDRAIEAALRRQ 588
            YSCPRCKKDK      +ADN MDPGSVPVEL+GLTQTEEMLIARCCPIMRVLHLK GQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRAL WLIANNPYYR IVLD+TA+SQLPVDGQLRGLR TVSGGDSERDLGPRGEGGG EDGDTPEDTESFMAPAGKSMLEDRAIEAALRRQ
Sbjct:   24 YSCPRCKKDKKSPKLFSADNTMDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTAISQLPVDGQLRGLRTTVSGGDSERDLGPRGEGGGEEDGDTPEDTESFMAPAGKSMLEDRAIEAALRRQ 225          
BLAST of mRNA_Ecto-sp9_F_contig11026.902.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH9_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 1.690e-89
Identity = 150/183 (81.97%), Postives = 158/183 (86.34%), Query Frame = 1
Query:   46 MDPGSVPVELKGLTQTEEMLIARCCPIMRVLHLKRGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALLWLIANNPYYRHIVLDDTALSQLPVDGQLRGLRATVSGGDSERDLGPRGEGGGAEDGDTPEDTESFMAPAGKSMLEDRAIEAALRRQVR 594
            MDPGSVPVEL+GLTQTEEMLIARCCPIMRVLHLK GQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRAL WLIANNPYYR IVLD+TALSQLPVDGQLRGLR TVSGGDSERDLGPRGEGGG EDGD+        +P  K+ L++      L +  R
Sbjct:    1 MDPGSVPVELQGLTQTEEMLIARCCPIMRVLHLKGGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALQWLIANNPYYRDIVLDNTALSQLPVDGQLRGLRTTVSGGDSERDLGPRGEGGGEEDGDSDRIGNLGNSPTMKARLQEEVRLGELAQSTR 183          
BLAST of mRNA_Ecto-sp9_F_contig11026.902.1 vs.
Match: Uncharacterized (protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LNP2_PARCT)

HSP 1 Score: 254 bits (649), Expect = 6.450e-72
Identity = 143/331 (43.20%), Postives = 198/331 (59.82%), Query Frame = 1
Query:    1 YSCPRCKKDK------TADNDMDPGSVPVELKGLTQTEEMLIARCCPIMRVLHLKRGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALLWLIANNPYYRHIVLDDTALSQLPVDGQLRGLRATVSGGDSERDLGPRGEGGGAEDGDTPEDT---------ESFMAPAGKSMLEDRAIEAALRRQVRESGANVPVNAWPGMEATALNEFKTTGLASMAFPALFPWGKGDPTDPARSRSVKPTDGMRHLLKY---FRDGRY--RFASHPRFPHWCQNMLERHRMLSQAQVYLKQNPGDAAMTIEHM 933
            Y C RCK+DK      +A+NDMDPG VP +L+GLTQ EEMLI+R CPIMRV     GQ GY GHV+N+ QDI +    LP   AD+P++I+RR G E   H+D  VRR +V  A+LWL  NNP++++I +D   +  LP +G    LR  +   ++E  +    EG        P+D          E  +     S +  R  +      ++++ + V    WP  E   +NEFKT GLA+MAFP LFP+GKGDPT+ AR   +  T+  +HL+K+     DG++  RFASHPRFP+W  NM +RH++LSQA VYL+Q+P DA MT+E +
Sbjct:  303 YICYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAE-DTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPHELRYVID--ENELSVHVENEG-------PPQDPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVSEVDPLDWPSTEGNLINEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAERLADGKFEWRFASHPRFPYWALNMKQRHQLLSQANVYLRQHPADANMTMEEL 623          
BLAST of mRNA_Ecto-sp9_F_contig11026.902.1 vs.
Match: Helitron_like_N (domain-containing protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GE38_PARCT)

HSP 1 Score: 253 bits (646), Expect = 2.380e-71
Identity = 146/331 (44.11%), Postives = 202/331 (61.03%), Query Frame = 1
Query:    1 YSCPRCKKDK------TADNDMDPGSVPVELKGLTQTEEMLIARCCPIMRVLHLKRGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALLWLIANNPYYRHIVLDDTALSQLPVDGQLRGLRATVSGGDSERDLGPRGEGGGAEDGDTPEDTESFMAPAGKSMLEDRAIE-AALRRQVRESGANV--------PVNAWPGMEATALNEFKTTGLASMAFPALFPWGKGDPTDPARSRSVKPTDGMRHLLKY---FRDGRY--RFASHPRFPHWCQNMLERHRMLSQAQVYLKQNPGDAAMTIEHM 933
            Y C RCK+DK      +A+NDMDPG VP +L+GLTQ EEMLI+R CPIMRV     GQ GY GHV+N+ QDI +    LP   AD+P++I+RR G E   H+D  VRR +V  A+LWL  NNP++++I +D   +  LP +G    LR  +     E +L    E     +G   +   S  A   + +L   +     +R++ R+ GA +        P++ WP  E   +NEFKT GLA+MAFP LFP+GKGDPT+ AR   +  T+  +HL+K+     DG++  RFASHPRFP+W  NM +RH++LSQA VYL+Q+P DA MT+E +
Sbjct:  146 YICYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAE-DTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID----ENELSVHVE----NEGPPQDPVMSANASVEELVLGSGSTSFIPMRQRQRKEGAAIQDAVNEVDPLD-WPSTEGNLINEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAERLADGKFEWRFASHPRFPYWALNMKQRHQLLSQANVYLRQHPADANMTMEEL 466          
BLAST of mRNA_Ecto-sp9_F_contig11026.902.1 vs.
Match: Helitron_like_N (domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9LY68_PARCT)

HSP 1 Score: 251 bits (641), Expect = 1.650e-70
Identity = 146/338 (43.20%), Postives = 202/338 (59.76%), Query Frame = 1
Query:    1 YSCPRCKKDK------TADNDMDPGSVPVELKGLTQTEEMLIARCCPIMRVLHLKRGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALLWLIANNPYYRHIVLDDTALSQLPVDGQLRGLRATVSGGDSERDLGPRGEGGGAEDGDTPED--------TESFMAPAGKSMLEDRAIEAALRRQVRESGANV--------PVNAWPGMEATALNEFKTTGLASMAFPALFPWGKGDPTDPARSRSVKPTDGMRHLLKY---FRDGRY--RFASHPRFPHWCQNMLERHRMLSQAQVYLKQNPGDAAMTIEHM 933
            Y C RCK+DK      +A+NDMDPG VP +L+GLTQ EEMLI+R CPIMRV     GQ GY GHV+N+ QDI +    LP   AD+P++I+RR G E   H D  VRR +V  A+LWL  NNP++++I +D   +  LP +G    LR  +   ++E  +    EG        P+D         E  +  +G +          +R++ R+ GA +        P++ WP  E   +NEFKT GLA+MAFP LFP+GKGDPT+ AR   +  T+  +HL+K+     DG++  RFASHPRFP+W  NM +RH++LSQA VYL+Q+P DA MT+E +
Sbjct:  161 YICYRCKRDKRSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAE-DTHLDFTVRRHKVFEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID--ENEHSVHVENEG-------PPQDPVMSANASVEELVLGSGSTSF------IPMRQRQRKEGAAIQDAVNEVDPLD-WPSTEGNRVNEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAEKLADGKFEWRFASHPRFPYWALNMKQRHQLLSQANVYLRQHPADANMTMEEL 481          
BLAST of mRNA_Ecto-sp9_F_contig11026.902.1 vs.
Match: ATP-dependent (DNA helicase n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I194_PARCT)

HSP 1 Score: 253 bits (647), Expect = 2.970e-68
Identity = 146/331 (44.11%), Postives = 203/331 (61.33%), Query Frame = 1
Query:    1 YSCPRCKKDK------TADNDMDPGSVPVELKGLTQTEEMLIARCCPIMRVLHLKRGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALLWLIANNPYYRHIVLDDTALSQLPVDGQLRGLRATVSGGDSERDLGPRGEGGGAEDGDTPEDTESFMAPAGKSMLEDRAIE-AALRRQVRESGANV--------PVNAWPGMEATALNEFKTTGLASMAFPALFPWGKGDPTDPARSRSVKPTDGMRHLLKY---FRDGRY--RFASHPRFPHWCQNMLERHRMLSQAQVYLKQNPGDAAMTIEHM 933
            Y C RCK+DK      +A+NDMDPG VP +L+GLTQ EEMLI+R CPIMRV     GQ GY GHV+N+ QDI +    LP   AD+P++I+RR G E   H+D  VRR +V  A+LWL  NNP++++I +D   +  LP +G    LR  +     E +L    E     +G   +   S  A   + +L + +     +R++ R+ GA +        P++ WP  E   +NEFKT GLA+MAFP LFP+GKGDPT+ AR   +  T+  +HL+K+     DG++  RFASHPRFP+W  NM +RH++LSQA VYL+Q+P DA MT+E +
Sbjct:  300 YICYRCKRDKKSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAE-DTHRDFTVRRHKVLEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID----ENELSVHVE----NEGPPQDPVMSANASVEELVLGNGSTSFIPMRQRQRKEGAAIQDAVNEVDPLD-WPSTEGNLINEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAERLADGKFEWRFASHPRFPYWALNMKQRHQLLSQANVYLRQHPADANMTMEEL 620          
BLAST of mRNA_Ecto-sp9_F_contig11026.902.1 vs.
Match: uncharacterized (protein LOC114518711 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106CBCF8)

HSP 1 Score: 246 bits (629), Expect = 4.470e-68
Identity = 143/331 (43.20%), Postives = 201/331 (60.73%), Query Frame = 1
Query:    1 YSCPRCKKDK------TADNDMDPGSVPVELKGLTQTEEMLIARCCPIMRVLHLKRGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALLWLIANNPYYRHIVLDDTALSQLPVDGQLRGLRATVSGGDSERDLGPRGEGGGAEDGDTPEDTESFMAPAGKSMLEDRAIE-AALRRQVRESGANV--------PVNAWPGMEATALNEFKTTGLASMAFPALFPWGKGDPTDPARSRSVKPTDGMRHLLKYFR---DGRY--RFASHPRFPHWCQNMLERHRMLSQAQVYLKQNPGDAAMTIEHM 933
            + C RCK+DK      +A NDMDPG VP +L+GLTQ EEMLI+R CPIM+V     GQ GY GHV+N+ QDI +    LP   AD+P++I+RR+G +   HKD  VRR RV  A+LWL  NNP+++ I +D   +  LP +G  + LR  +   D+E  +    E      G   E   S  A   + +L + +     +R++ R+ GA +        P++ WP  E  A+NEFKT GLASMAFP LFP+G+ DPT+  R   V   +  +HL+K+     +G++  RFASHPRFP+W  NM +RH++LSQA +YL+Q+P DA MT+E +
Sbjct:  320 FVCYRCKRDKKSPKNFSAGNDMDPGIVPEQLRGLTQVEEMLISRVCPIMQVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPAQVADLPVMIVRRQGADET-HKDFTVRRHRVLEAILWLKTNNPFFKDIEIDRDVIQSLPENGIPKELRYVID--DNELSVHVENE------GPPQEPVMSANATVEELVLGNGSTSFIPMRQRQRKDGAAIQDAVNEVDPLD-WPSTEGNAVNEFKTDGLASMAFPTLFPYGRSDPTNRVRQHEVSLAEAFKHLMKFAERLPNGKFEWRFASHPRFPYWALNMKQRHQLLSQANIYLRQHPADANMTMEEL 640          
BLAST of mRNA_Ecto-sp9_F_contig11026.902.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813YMV4_9BILA)

HSP 1 Score: 250 bits (638), Expect = 1.050e-67
Identity = 137/349 (39.26%), Postives = 196/349 (56.16%), Query Frame = 3
Query:  963 AQQLTQRIRSGSNN-TGSRPCWYAKQQELQAIFATRGCATLFFTFSAADTHWDGLFDLMPPGYQDSPAGKRRALIENPHIADTYFGSRADAFTSAFFGGVLQTQSLWYRLEYQGRGSTHAHGCAWLQDDPGNVDLVCKAYGGRKAAERLEAAEGLAAGQGGISDEEERQALERAVADGKTADSKVCRYADWLISTVNTRSPEERAAHPWGVPDRHPCSVNPFKHGPVSDEAAGRADIDGLINCYQRHVSRPEGYCK-RASRQGCRFGFPHECQPETSLQFEEMDNGSVRATIKTKRNDGNLNSYGRLALSRWRANIDFQLILDWDQAVRYMVKYLSKGEKRSPAAADVF 2003
            A+QL +R+   S N TGS   WY ++ EL+  F  +  AT+FFTFS AD +W+ L  L+P G+ D+P  +   ++ NPH+ D YF  R + F    F G+LQ +  W+R E+Q R S HAHG A  ++DPG  +L  K Y GRKA + + +             E+++  L + + +GK A+  V  Y D L+S +N R+     +    +P+ HPC+++  K  P       R D + ++NC QRHV RP+GYCK +     CRF FP +   +T + F+E D  +V A IK KRND NLN +  L    WR N D Q+ILD + A+RYMVKY SK EK S    + F
Sbjct:  308 AEQLIKRMTPYSANITGSTAYWYQRRCELETTFEQKKPATIFFTFSYADNYWEDLHRLLPGGFSDNPKVRYENVLRNPHLVDWYFSVRLNEFLRVVFDGILQCEWRWHRYEWQARSSIHAHGAARFKNDPGLTELTTKVYVGRKAEKEITS---------NSVTEDKKSKLLQLIEEGKNAELVVINYTDTLLSAMNPRNCPTCES----LPETHPCTIDFTKLKPDQH----RKDYEEILNCVQRHVCRPDGYCKSKKGHNQCRFEFPQDVISKTEIVFKETDT-NVIAEIKLKRNDTNLNVHNILTCHHWRGNTDMQVILDKNAAIRYMVKYASKAEKSSQTFIETF 638          
BLAST of mRNA_Ecto-sp9_F_contig11026.902.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EWD8_PARCT)

HSP 1 Score: 251 bits (641), Expect = 1.100e-67
Identity = 146/338 (43.20%), Postives = 202/338 (59.76%), Query Frame = 1
Query:    1 YSCPRCKKDK------TADNDMDPGSVPVELKGLTQTEEMLIARCCPIMRVLHLKRGQLGYGGHVVNVAQDISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALLWLIANNPYYRHIVLDDTALSQLPVDGQLRGLRATVSGGDSERDLGPRGEGGGAEDGDTPED--------TESFMAPAGKSMLEDRAIEAALRRQVRESGANV--------PVNAWPGMEATALNEFKTTGLASMAFPALFPWGKGDPTDPARSRSVKPTDGMRHLLKY---FRDGRY--RFASHPRFPHWCQNMLERHRMLSQAQVYLKQNPGDAAMTIEHM 933
            Y C RCK+DK      +A+NDMDPG VP +L+GLTQ EEMLI+R CPIMRV     GQ GY GHV+N+ QDI +    LP   AD+P++I+RR G E   H D  VRR +V  A+LWL  NNP++++I +D   +  LP +G    LR  +   ++E  +    EG        P+D         E  +  +G +          +R++ R+ GA +        P++ WP  E   +NEFKT GLA+MAFP LFP+GKGDPT+ AR   +  T+  +HL+K+     DG++  RFASHPRFP+W  NM +RH++LSQA VYL+Q+P DA MT+E +
Sbjct:  148 YICYRCKRDKRSPKKFSAENDMDPGIVPEQLRGLTQVEEMLISRVCPIMRVYRKHGGQRGYKGHVLNLPQDIQSFLNRLPSRVADLPVLIVRRHGAE-DTHLDFTVRRHKVFEAVLWLKTNNPFFKNIEIDRDVIQSLPENGIPDELRYVID--ENEHSVHVENEG-------PPQDPVMSANASVEELVLGSGSTSF------IPMRQRQRKEGAAIQDAVNEVDPLD-WPSTEGNRVNEFKTDGLATMAFPTLFPYGKGDPTNRARQHGITLTEAFKHLMKFAEKLADGKFEWRFASHPRFPYWALNMKQRHQLLSQANVYLRQHPADANMTMEEL 468          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11026.902.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ATP-dependent1.030e-22291.18DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
Uncharacterized7.560e-11392.08protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.690e-8981.97protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.450e-7243.20protein n=2 Tax=Paramuricea clavata TaxID=317549 R... [more]
Helitron_like_N2.380e-7144.11domain-containing protein n=3 Tax=Paramuricea clav... [more]
Helitron_like_N1.650e-7043.20domain-containing protein (Fragment) n=1 Tax=Param... [more]
ATP-dependent2.970e-6844.11DNA helicase n=3 Tax=Paramuricea clavata TaxID=317... [more]
uncharacterized4.470e-6843.20protein LOC114518711 n=1 Tax=Dendronephthya gigant... [more]
ATP-dependent1.050e-6739.26DNA helicase n=1 Tax=Brachionus calyciflorus TaxID... [more]
ATP-dependent1.100e-6743.20DNA helicase n=1 Tax=Paramuricea clavata TaxID=317... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11026contigEcto-sp9_F_contig11026:1482..3484 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score200.7
Seed ortholog evalue1.7e-48
Seed eggNOG ortholog400682.PAC_15725762
EggNOG OGs2CC8B@1,2S3BW@2759,3A3QP@33154,3C1YH@33208
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size2003
Cds size1572
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11026.902.1prot_Ecto-sp9_F_contig11026.902.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig11026 1868..3439 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928337.3748844-UTR-Ecto-sp9_F_contig11026:1481..18671622928337.3748844-UTR-Ecto-sp9_F_contig11026:1481..1867Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11026 1482..1867 -
1692277838.6576982-UTR-Ecto-sp9_F_contig11026:1481..18671692277838.6576982-UTR-Ecto-sp9_F_contig11026:1481..1867Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11026 1482..1867 -
1622928337.3948278-UTR-Ecto-sp9_F_contig11026:3439..34841622928337.3948278-UTR-Ecto-sp9_F_contig11026:3439..3484Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11026 3440..3484 -
1692277838.6797957-UTR-Ecto-sp9_F_contig11026:3439..34841692277838.6797957-UTR-Ecto-sp9_F_contig11026:3439..3484Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11026 3440..3484 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928337.3852262-CDS-Ecto-sp9_F_contig11026:1867..34391622928337.3852262-CDS-Ecto-sp9_F_contig11026:1867..3439Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11026 1868..3439 -
1692277838.6695635-CDS-Ecto-sp9_F_contig11026:1867..34391692277838.6695635-CDS-Ecto-sp9_F_contig11026:1867..3439Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11026 1868..3439 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig11026.902.1

>prot_Ecto-sp9_F_contig11026.902.1 ID=prot_Ecto-sp9_F_contig11026.902.1|Name=mRNA_Ecto-sp9_F_contig11026.902.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=524bp
MDPGSVPVELKGLTQTEEMLIARCCPIMRVLHLKRGQLGYGGHVVNVAQD
ISTLAAALPRLAADVPIIIIRREGQEPGQHKDLHVRRARVQRALLWLIAN
NPYYRHIVLDDTALSQLPVDGQLRGLRATVSGGDSERDLGPRGEGGGAED
GDTPEDTESFMAPAGKSMLEDRAIEAALRRQVRESGANVPVNAWPGMEAT
ALNEFKTTGLASMAFPALFPWGKGDPTDPARSRSVKPTDGMRHLLKYFRD
GRYRFASHPRFPHWCQNMLERHRMLSQAQVYLKQNPGDAAMTIEHMSHCS
GRVRRWRSSSHSASEADPTTPGLGRAGTPSSRSSRRFLLLGAAPLSSSRS
LPPTPTGTASSTSCRQATRTPQRANEGRSLKTRISPTPTSAAGRTLSPPP
SSAVYSKPSRCGTGLSTRGGVARTRTDVPGCKTIPATSTSSAKLTGGGRR
PNGWRRPRAWPPDRGGSATRKNARLWSEPSPTAKQRTPRFADTPTGSSAP
STLGLRRSAPPIRGECQTVTHAP*
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mRNA from alignment at Ecto-sp9_F_contig11026:1482..3484-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig11026.902.1 ID=mRNA_Ecto-sp9_F_contig11026.902.1|Name=mRNA_Ecto-sp9_F_contig11026.902.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2003bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11026:1482..3484- (Ectocarpus species9 EcSCA_722f female)
TACAGTTGCCCGCGGTGCAAGAAGGACAAGACCGCCGACAACGACATGGA TCCTGGGAGCGTACCCGTCGAGCTGAAAGGCCTGACCCAGACGGAGGAGA TGCTCATCGCGCGGTGCTGTCCGATCATGCGCGTCCTCCACCTCAAGCGG GGACAGCTGGGGTACGGTGGCCATGTCGTCAACGTCGCTCAGGACATCAG TACCTTAGCCGCTGCCCTCCCGAGGTTGGCCGCCGATGTCCCGATCATCA TCATCCGGAGGGAGGGGCAGGAACCCGGCCAGCACAAGGACCTACACGTG CGGAGGGCTCGCGTGCAACGGGCTTTGCTATGGCTCATTGCCAACAACCC GTACTACCGCCACATCGTCCTTGACGACACGGCCCTATCCCAGCTCCCCG TCGACGGGCAACTACGTGGACTGCGAGCCACCGTCAGCGGGGGAGACTCA GAGCGTGACCTTGGCCCTCGGGGGGAGGGGGGAGGGGCGGAGGACGGTGA TACCCCCGAGGACACGGAGTCCTTCATGGCTCCGGCAGGCAAGAGCATGC TCGAGGACCGCGCGATTGAAGCAGCCCTGCGGAGGCAGGTGAGGGAAAGC GGGGCGAATGTTCCGGTCAACGCCTGGCCTGGGATGGAGGCGACCGCCCT GAACGAGTTCAAGACAACAGGCCTCGCGTCCATGGCCTTCCCCGCCCTCT TCCCCTGGGGGAAGGGGGACCCTACCGACCCTGCACGGTCCAGGAGCGTC AAGCCCACCGACGGCATGAGGCACCTCCTCAAGTACTTCCGCGACGGTCG CTACCGCTTTGCATCTCACCCCCGGTTTCCTCACTGGTGCCAGAACATGC TCGAACGCCACAGGATGCTCAGCCAGGCGCAGGTCTACCTCAAGCAAAAC CCAGGGGACGCCGCCATGACCATAGAGCACATGAGCCACTGTTCCGGTCG GGTTCGCCGCTGGCGCAGCAGCTCACACAGCGCATCCGAAGCGGATCCAA CAACACCGGGTCTAGGCCGTGCTGGTACGCCAAGCAGCAGGAGCTCCAGG CGATTTTTGCTACTAGGGGCTGCGCCACTCTCTTCTTCACGTTCTCTGCC GCCGACACCCACTGGGACGGCCTCTTCGACCTCATGCCGCCAGGCTACCA GGACTCCCCAGCGGGCAAACGAAGGGCGCTCATTGAAAACCCGCATATCG CCGACACCTACTTCGGCAGCAGGGCGGACGCTTTCACCTCCGCCTTCTTC GGCGGTGTACTCCAAACCCAGTCGCTGTGGTACCGGCTTGAGTACCAGGG GAGGGGTAGCACGCACGCGCACGGATGTGCCTGGCTGCAAGACGATCCCG GCAACGTCGACCTCGTCTGCAAAGCTTACGGGGGGAGGAAGGCGGCCGAA CGGCTGGAGGCGGCCGAGGGCCTGGCCGCCGGACAGGGGGGGATCAGCGA CGAGGAAGAACGCCAGGCTCTGGAGCGAGCCGTCGCCGACGGCAAAACAG CGGACTCCAAGGTTTGCAGATACGCCGACTGGCTCATCAGCACCGTCAAC ACTCGGTCTCCGGAGGAGCGCGCCGCCCATCCGTGGGGAGTGCCAGACCG TCACCCATGCTCCGTGAACCCCTTCAAGCACGGGCCTGTCAGCGACGAGG CCGCAGGCCGTGCCGACATCGACGGACTCATCAACTGCTACCAGCGCCAC GTCTCTCGTCCTGAAGGGTACTGCAAGCGCGCTAGTCGGCAGGGGTGTCG CTTCGGCTTCCCTCACGAGTGTCAGCCCGAGACCTCCTTGCAGTTCGAGG AGATGGACAACGGCTCCGTGAGAGCCACCATCAAAACGAAGCGCAACGAC GGCAACCTCAACAGCTACGGCCGCCTTGCTCTCTCTCGATGGCGGGCGAA CATCGACTTCCAACTCATCTTGGACTGGGACCAGGCGGTGCGGTACATGG TGAAGTATTTGAGCAAAGGAGAGAAGCGGTCGCCCGCCGCCGCCGACGTC TTC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11026:1482..3484-

>mRNA_Ecto-sp9_F_contig11026.902.1 ID=mRNA_Ecto-sp9_F_contig11026.902.1|Name=mRNA_Ecto-sp9_F_contig11026.902.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3144bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11026:1482..3484- (Ectocarpus species9 EcSCA_722f female)
ATGGATCCTGGGAGCGTACCCGTCGAGCTGAAAGGCCTGACCCAGACGGA
GGAGATGCTCATCGCGCGGTGCTGTCCGATCATGCGCGTCCTCCACCTCA
AGCGGGGACAGCTGGGGTACGGTGGCCATGTCGTCAACGTCGCTCAGGAC
ATCAGTACCTTAGCCGCTGCCCTCCCGAGGTTGGCCGCCGATGTCCCGAT
CATCATCATCCGGAGGGAGGGGCAGGAACCCGGCCAGCACAAGGACCTAC
ACGTGCGGAGGGCTCGCGTGCAACGGGCTTTGCTATGGCTCATTGCCAAC
AACCCGTACTACCGCCACATCGTCCTTGACGACACGGCCCTATCCCAGCT
CCCCGTCGACGGGCAACTACGTGGACTGCGAGCCACCGTCAGCGGGGGAG
ACTCAGAGCGTGACCTTGGCCCTCGGGGGGAGGGGGGAGGGGCGGAGGAC
GGTGATACCCCCGAGGACACGGAGTCCTTCATGGCTCCGGCAGGCAAGAG
CATGCTCGAGGACCGCGCGATTGAAGCAGCCCTGCGGAGGCAGGTGAGGG
AAAGCGGGGCGAATGTTCCGGTCAACGCCTGGCCTGGGATGGAGGCGACC
GCCCTGAACGAGTTCAAGACAACAGGCCTCGCGTCCATGGCCTTCCCCGC
CCTCTTCCCCTGGGGGAAGGGGGACCCTACCGACCCTGCACGGTCCAGGA
GCGTCAAGCCCACCGACGGCATGAGGCACCTCCTCAAGTACTTCCGCGAC
GGTCGCTACCGCTTTGCATCTCACCCCCGGTTTCCTCACTGGTGCCAGAA
CATGCTCGAACGCCACAGGATGCTCAGCCAGGCGCAGGTCTACCTCAAGC
AAAACCCAGGGGACGCCGCCATGACCATAGAGCACATGAGCCACTGTTCC
GGTCGGGTTCGCCGCTGGCGCAGCAGCTCACACAGCGCATCCGAAGCGGA
TCCAACAACACCGGGTCTAGGCCGTGCTGGTACGCCAAGCAGCAGGAGCT
CCAGGCGATTTTTGCTACTAGGGGCTGCGCCACTCTCTTCTTCACGTTCT
CTGCCGCCGACACCCACTGGGACGGCCTCTTCGACCTCATGCCGCCAGGC
TACCAGGACTCCCCAGCGGGCAAACGAAGGGCGCTCATTGAAAACCCGCA
TATCGCCGACACCTACTTCGGCAGCAGGGCGGACGCTTTCACCTCCGCCT
TCTTCGGCGGTGTACTCCAAACCCAGTCGCTGTGGTACCGGCTTGAGTAC
CAGGGGAGGGGTAGCACGCACGCGCACGGATGTGCCTGGCTGCAAGACGA
TCCCGGCAACGTCGACCTCGTCTGCAAAGCTTACGGGGGGAGGAAGGCGG
CCGAACGGCTGGAGGCGGCCGAGGGCCTGGCCGCCGGACAGGGGGGGATC
AGCGACGAGGAAGAACGCCAGGCTCTGGAGCGAGCCGTCGCCGACGGCAA
AACAGCGGACTCCAAGGTTTGCAGATACGCCGACTGGCTCATCAGCACCG
TCAACACTCGGTCTCCGGAGGAGCGCGCCGCCCATCCGTGGGGAGTGCCA
GACCGTCACCCATGCTCCGTGAATGGATCCTGGGAGCGTACCCGTCGAGC
TGAAAGGCCTGACCCAGACGGAGGAGATGCTCATCGCGCGGTGCTGTCCG
ATCATGCGCGTCCTCCACCTCAAGCGGGGACAGCTGGGGTACGGTGGCCA
TGTCGTCAACGTCGCTCAGGACATCAGTACCTTAGCCGCTGCCCTCCCGA
GGTTGGCCGCCGATGTCCCGATCATCATCATCCGGAGGGAGGGGCAGGAA
CCCGGCCAGCACAAGGACCTACACGTGCGGAGGGCTCGCGTGCAACGGGC
TTTGCTATGGCTCATTGCCAACAACCCGTACTACCGCCACATCGTCCTTG
ACGACACGGCCCTATCCCAGCTCCCCGTCGACGGGCAACTACGTGGACTG
CGAGCCACCGTCAGCGGGGGAGACTCAGAGCGTGACCTTGGCCCTCGGGG
GGAGGGGGGAGGGGCGGAGGACGGTGATACCCCCGAGGACACGGAGTCCT
TCATGGCTCCGGCAGGCAAGAGCATGCTCGAGGACCGCGCGATTGAAGCA
GCCCTGCGGAGGCAGGTGAGGGAAAGCGGGGCGAATGTTCCGGTCAACGC
CTGGCCTGGGATGGAGGCGACCGCCCTGAACGAGTTCAAGACAACAGGCC
TCGCGTCCATGGCCTTCCCCGCCCTCTTCCCCTGGGGGAAGGGGGACCCT
ACCGACCCTGCACGGTCCAGGAGCGTCAAGCCCACCGACGGCATGAGGCA
CCTCCTCAAGTACTTCCGCGACGGTCGCTACCGCTTTGCATCTCACCCCC
GGTTTCCTCACTGGTGCCAGAACATGCTCGAACGCCACAGGATGCTCAGC
CAGGCGCAGGTCTACCTCAAGCAAAACCCAGGGGACGCCGCCATGACCAT
AGAGCACATGAGCCACTGTTCCGGTCGGGTTCGCCGCTGGCGCAGCAGCT
CACACAGCGCATCCGAAGCGGATCCAACAACACCGGGTCTAGGCCGTGCT
GGTACGCCAAGCAGCAGGAGCTCCAGGCGATTTTTGCTACTAGGGGCTGC
GCCACTCTCTTCTTCACGTTCTCTGCCGCCGACACCCACTGGGACGGCCT
CTTCGACCTCATGCCGCCAGGCTACCAGGACTCCCCAGCGGGCAAACGAA
GGGCGCTCATTGAAAACCCGCATATCGCCGACACCTACTTCGGCAGCAGG
GCGGACGCTTTCACCTCCGCCTTCTTCGGCGGTGTACTCCAAACCCAGTC
GCTGTGGTACCGGCTTGAGTACCAGGGGAGGGGTAGCACGCACGCGCACG
GATGTGCCTGGCTGCAAGACGATCCCGGCAACGTCGACCTCGTCTGCAAA
GCTTACGGGGGGAGGAAGGCGGCCGAACGGCTGGAGGCGGCCGAGGGCCT
GGCCGCCGGACAGGGGGGGATCAGCGACGAGGAAGAACGCCAGGCTCTGG
AGCGAGCCGTCGCCGACGGCAAAACAGCGGACTCCAAGGTTTGCAGATAC
GCCGACTGGCTCATCAGCACCGTCAACACTCGGTCTCCGGAGGAGCGCGC
CGCCCATCCGTGGGGAGTGCCAGACCGTCACCCATGCTCCGTGA
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