mRNA_Ecto-sp9_F_contig11.870.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig11.870.1 vs.
Match: Reelin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIM3_ECTSI) HSP 1 Score: 1981 bits (5131), Expect = 0.000e+0 Identity = 979/1000 (97.90%), Postives = 987/1000 (98.70%), Query Frame = 1
Query: 1 MSPPWEPYPERKRKLEERARRHKSKANPQFPGGKQHAGSLGRRRNRNPATDSSFSSSSSADDHARGADGVVAGYDTDSVATSCGSYRKGLLKSGDSHVRVRPDNCSCLQDGGCGDEDGCCAEDLPGVEACPCFDRVSTAGVLEEKLPVDTCGVCLEDGKLRTCCNRHYCKLCYEGTGNCPGCHVITVGANRGLLASQKDAADSAAAAARAAVATLPGVRDGEECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSCHVPAEKRIEYQRIPRDPGVVPVLVGFFATVLVCLVTLAGVSVAIASNSAVIKTVFAQTCYGFFPSCTPGPKCVAYDSGDIGNGLEPITEWSACEDETTVNKIYGSFCVFDEEVYVYSDEKWGFDFCAEEFMSGSAGAYVFEDTFEMWDTENVSSNTMASARWDHVTNGRLSDVCGLGNGAGTMMFSGANFREVETLDVDMRYGGKVLFLMKMGPTVPDASAVLCKPAYGGNVYLYYSLDGGGVWETLSILETFAYRKETFTEVEVDVPSTLNAASVRFRWKQENFENALEHWALDDVRVLSYFAEGWRETAAFESTVDVEHETLQEIRCCLNSEQCDLSKNRQEAVDCAAYITETSNERALLGAELFVLLAGLVSLARSLYRTGEGMLLEGWEYAIPVFLRKKRAKIFMADDPVPGSMNKVFRLEVNLRWQTRFVALVGVPLGICWLYCATLLRNFFLVEELTLLPDVSPQSVRVKVHVSGLFILATFIDVHSAFLLARDVVCVLPLWLPKVDVDLRPSAGWLRIGTQQISLKDIKDTEMFSRRFCLWLAAGYIAGVMPWCLVSLILKYSYIPYPVARYVTVSLGTVVLARAWLGPEWVVKTAYSVRWLLTMDILRRDDIGNAFIAEKTKHLVVCCAVFGTLLTMVVLQLFNTRFFAIISAVALAMFAFYGLGLSVVQGLPITPRFHLTTISRGVMLRVHRRVVCPCERRLEQCGGMHSRDELVCVFVRDALTFNEMLRGDDTVD 3000
MSPPWEPYPERKRKLEERARRHKSKAN Q PGGKQH GSL RRRNRNPATDSSFSSSSSADDHARGADG VAGYDTDSVATSCGSYRKGLLKSGDSHVRVRPDNCSCLQDGGCGDEDGCCAEDLPGVEACPCFDRVSTAG+LEEKLPVDTCGVCLEDGKLRTCCNRHYCKLCYEGTGNCPGCHVITVGANRGLLASQKDAADSA+AAARAAVATLPGVRDGEECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSCHV AEKRIEYQRIPRDPGVVPVLVGFFATVLVCLVTLAGVSVAIASNSAVIKTVF QTCYGFFPSCTPGPKCVAYDSGDIGNGLEPITEWSACEDETTVNKIYGSFCVFDEEVYVYSDEKWGFDFC EEFMSGSAGAYVFEDTFEMWD EN+SSNTMASARWDHVTNGRLSDVCGLGNGAGTMMFSGANFREVETLDVDMRYGGKVLFLMKMGPTVPDASAVLCKPAYGGNVYLYYSLDGGGVWETLSILETFAYRKE FTEVEVDVPSTLNAASVRFRWKQENFENALE+WALDDVRVLSYFAEGWRETAAFESTVDVEHETL+EIRCCLNSEQCDLSKNRQEAVDCAAYITET NERALLGAELFVLLAGLV+LARSLYRTGEGM+LEGWEYAIPVFLRKKRAKIFMADDPVPGSMNKVFRLEVNLRWQTRFVALVGVPLGICWLYCATLLRNF+LVEELTLLPDVSPQSVRVKVHVSGLFILATFIDVHS FLLARDVVCVLPLWLPKVDVDLRPSAGWLRIGTQQISLKDIKDTEMFSRRFCLWLAAGYIAGVMPWCLVSLILKYSYIPY VARYVTVSLGTVVLARAWLGPEWVVKTAYSVRWLLTMDILRRDDIGNAFIAEKTKHLVVCCAVFGTLLTMVVLQLFNTRFFAIISAVALAMFAFYGLGLSVVQGLPITPRFHLTTISRGVMLRVHRRVVCPCERRLEQCGGMHSRDELVCVFVRDALTFNEMLRGDDTVD
Sbjct: 1 MSPPWEPYPERKRKLEERARRHKSKANQQVPGGKQHVGSLERRRNRNPATDSSFSSSSSADDHARGADGAVAGYDTDSVATSCGSYRKGLLKSGDSHVRVRPDNCSCLQDGGCGDEDGCCAEDLPGVEACPCFDRVSTAGILEEKLPVDTCGVCLEDGKLRTCCNRHYCKLCYEGTGNCPGCHVITVGANRGLLASQKDAADSASAAARAAVATLPGVRDGEECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSCHVLAEKRIEYQRIPRDPGVVPVLVGFFATVLVCLVTLAGVSVAIASNSAVIKTVFDQTCYGFFPSCTPGPKCVAYDSGDIGNGLEPITEWSACEDETTVNKIYGSFCVFDEEVYVYSDEKWGFDFCEEEFMSGSAGAYVFEDTFEMWDAENLSSNTMASARWDHVTNGRLSDVCGLGNGAGTMMFSGANFREVETLDVDMRYGGKVLFLMKMGPTVPDASAVLCKPAYGGNVYLYYSLDGGGVWETLSILETFAYRKEAFTEVEVDVPSTLNAASVRFRWKQENFENALEYWALDDVRVLSYFAEGWRETAAFESTVDVEHETLREIRCCLNSEQCDLSKNRQEAVDCAAYITETLNERALLGAELFVLLAGLVTLARSLYRTGEGMVLEGWEYAIPVFLRKKRAKIFMADDPVPGSMNKVFRLEVNLRWQTRFVALVGVPLGICWLYCATLLRNFYLVEELTLLPDVSPQSVRVKVHVSGLFILATFIDVHSVFLLARDVVCVLPLWLPKVDVDLRPSAGWLRIGTQQISLKDIKDTEMFSRRFCLWLAAGYIAGVMPWCLVSLILKYSYIPYAVARYVTVSLGTVVLARAWLGPEWVVKTAYSVRWLLTMDILRRDDIGNAFIAEKTKHLVVCCAVFGTLLTMVVLQLFNTRFFAIISAVALAMFAFYGLGLSVVQGLPITPRFHLTTISRGVMLRVHRRVVCPCERRLEQCGGMHSRDELVCVFVRDALTFNEMLRGDDTVD 1000
BLAST of mRNA_Ecto-sp9_F_contig11.870.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ23_9STRA) HSP 1 Score: 795 bits (2054), Expect = 4.420e-273 Identity = 414/923 (44.85%), Postives = 553/923 (59.91%), Query Frame = 1
Query: 289 HVRVRPDNCSCLQDG-GCGDEDGCCAEDLPGVEACPC---FDRVSTAGVLEEKLPVDT------------CGVCLEDGKLRTCCNRHYCKLCYEGTGNCPGCHVITVGANRGLLASQKDAADSAAAAARAAVATLPGVRDGEECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSCHVPAEKRIEYQRIPRDPGVVPVLVGFFATVLVCLVTLAGVSVAIASNSAVIKTVFAQTCYGFFPSCTPGPKCVAYDSGDIGNGLEPITEWSACEDETTVNKIYGSFCVFDEEVYVYSDEKWGFDFCAEEFMSGSAGAYVFEDTFEMW-DTENVSSNTMASARWDHVTNGRLSDVCGLGNGAGTMMFSGANFREVETLDVDMRYGGKVLFLMKMGPTVPDASAVLCKPAYGGNVYLYYSLDGGGVWETLSILETFAYRKETFTEVEVDVPSTLNAASVRFRWKQENFENALEHWALDDVRVLSYFAEGWRETAAFESTVDVEHETLQEIRCCLNSEQCDLSKNRQEAVDCAAYITETSNERALLGAELFVLLAGLVSLARSLYRTGEGMLLEGWEYAIPVFLRKKRAKIFMADDPVPGSMNKVFRLEVNLRWQTRFVALVGVPLGICWLYCATLLRNFFLVEELTL---LPDVSPQSVRVKVHVSGLFILATFIDVHSAFLLARDVVCVLPLWLPKVDVDLRPSAGWLRIGTQQISLKDIKDTEMFSRRFCLWLAAGYIAGVMPWCLVSLILKYSYIPYPVARYVTVSLGTVVLARAWLGPEWVVKTAYSVRWLLTMDILRRDDIGNAFIAEKTKHLVVCCAVFGTLLTMVVLQLFNTRFFAIISAVALAMFAFYGLGLSVVQGLPITPRFHLTTISRGVMLRVHRRVVCPCERRLEQCGGMHSRDELVCVFVRDALTFNEMLRGDDTV 2997
+ R R +C C + CG DGCC +D P CPC R +TAG C C EDG +R CC YCK CYE TGNCP C +IT GAN+G ++ +A ++ A RDGEECR CLRQGF RKCCGEF+CS+CYF+ G CP+C PA++R+ R PRDPGV PVL+G+ + LVCL LA +V A++ + +TV CYGFFP C+ CV + G + + W C +T VNK+YG +CV D++VYV+SD+KWG+D C E F G A F+DTF+ W + + ++N M S WDHVTNG T ++R+ + F KMGP D A CKPAYGGNVY+Y+S +G ENF++ LEHWALDDVRV+S FA W + AAF + + TL +I+CC+NSEQC LSK QEAVDCA + +E+ NERA+LGAE FVL+A + +L R +Y T + ++L GW +P LR K+AK+FMADDP PG M+ F L+V+ W+ F+ G PL + WL+CA+LLRNF+LVEE+T+ LP P + +VHVSG+F++AT +D + + LAR+VVC+LPLW+P +DVDLRPSAGWL+IG +QI LK IKD ++F R+C +AA ++AG PWCL SL+LKY+Y+ Y + RY T LG ++L RAWLGP WV++ A+++RWL+T ++ RD++G+A A KT+++ + A T VV L + F I AL YGL L+VVQGLP+TPRF LTTI G+ LRVHR+ CPC+ R E C MHSRDE+V +FVRD TF E+L GDD++
Sbjct: 77 YQRARAGSCWCGRGAPACGGADGCCFDDAPDAAECPCRTRLRRAATAGGGRXXXXXXXXXXXXXXGGAARCDQCREDGLVRACCKGAYCKYCYEVTGNCPKCGLITTGANKGKYWAEVEAGEAEA-------------RDGEECRVCLRQGFRRKCCGEFFCSACYFRAGACPACAAPAQRRVRLTRTPRDPGVAPVLLGYAVSALVCLAALAVAAVVAANDRTLPRTVSGYRCYGFFPECSGEDACVEVEGGAARGMPDALVSWKQCTLQT-VNKLYGQYCVHDKQVYVHSDKKWGYDMCEEGFPPG---ATRFQDTFDAWGNATDAATNAMLSGAWDHVTNG-------------------------PTTKFEVRFVPPLQFWFKMGPPTDDPLAAACKPAYGGNVYIYFSTEG------------------------------------------ENFQDLLEHWALDDVRVVSAFAPQWHDGAAFRAQAAGDDATLAQIKCCMNSEQCSLSKAEQEAVDCAKFASESGNERAILGAERFVLIAAVAALIRWIYATAQAVVLRGWTQLLPEKLRPKQAKLFMADDPPPGIMDSQFALQVSQVWRITFMVANGAPLVLLWLWCASLLRNFYLVEEITVGAGLPH--PWLLVFRVHVSGVFLIATLLDGLAVYTLAREVVCLLPLWVPLIDVDLRPSAGWLQIGDRQIKLKHIKDQQLFGARYCRLIAAAHVAGAWPWCLASLVLKYNYLSYEIQRYTTPVLGAIILIRAWLGPTWVLQAAFALRWLVTTNMYDRDEVGSAVTAVKTRYMALYSAAAATFTATVVAALVHPSFAGIAFGAALLAGTLYGLLLAVVQGLPVTPRFLLTTIQSGLYLRVHRQAYCPCDARFEHCSAMHSRDEVVSIFVRDVSTFRELLEGDDSI 913
BLAST of mRNA_Ecto-sp9_F_contig11.870.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNS6_9PHAE) HSP 1 Score: 594 bits (1531), Expect = 6.220e-203 Identity = 284/293 (96.93%), Postives = 287/293 (97.95%), Query Frame = 1
Query: 496 RHYCKLCYEGTGNCPGCHVITVGANRGLLASQKDAADSAAAAARAAVATLPGVRDGEECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSCHVPAEKRIEYQRIPRDPGVVPVLVGFFATVLVCLVTLAGVSVAIASNSAVIKTVFAQTCYGFFPSCTPGPKCVAYDSGDIGNGLEPITEWSACEDETTVNKIYGSFCVFDEEVYVYSDEKWGFDFCAEEFMSGSAGAYVFEDTFEMWDTENVSSNTMASARWDHVTNGRLSDVCGLGNGAGTMMFSGANFREVETLDVDMRYG 1374
RHYCKLCYEGTGNCPGCHVITVGANRGLLASQKDAADS AAAA+A VATLPGVRDGEECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSCHVPAEKRIEYQRIPRDPGVVPVLVGFFAT+LVCLVTLAGVSVAIA+NSAVIKTVF QTCYGFFPSCTPG KCVAYDSGDIGNGLEPITEWSACEDETTVNKIYGSFCVFDEEVYVYSDEKWGFDFC EEFMSGSAGAYVFEDTFEMWDTENVSSNTMASARWDHVTNGRLSDVCGLGNGAGTMMFSGANFREVETLDVDMR G
Sbjct: 47 RHYCKLCYEGTGNCPGCHVITVGANRGLLASQKDAADSTAAAAKATVATLPGVRDGEECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSCHVPAEKRIEYQRIPRDPGVVPVLVGFFATILVCLVTLAGVSVAIANNSAVIKTVFDQTCYGFFPSCTPGAKCVAYDSGDIGNGLEPITEWSACEDETTVNKIYGSFCVFDEEVYVYSDEKWGFDFCEEEFMSGSAGAYVFEDTFEMWDTENVSSNTMASARWDHVTNGRLSDVCGLGNGAGTMMFSGANFREVETLDVDMRSG 339
BLAST of mRNA_Ecto-sp9_F_contig11.870.1 vs.
Match: Reelin (n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BHZ7_9STRA) HSP 1 Score: 382 bits (981), Expect = 1.590e-113 Identity = 275/922 (29.83%), Postives = 426/922 (46.20%), Query Frame = 1
Query: 505 CKLCYEGTGN---------CPGCHVITVGANRGLLASQKDAADSAAAAARAAVATLPGVRDGEECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSC-HVPAEKRIEYQRIPRDPGVVPVLVGFFATVLVCLVTLAGVSVAIASNSAVIKTVFAQTCYGFFPSCTPGPKCVAYDSGDIGNGLEPITEWSACEDETTVNKIYGSFCVFDEEVYVYSDEKWGFDFC---------------AEEFMSG--SAGAYVFEDTFEMW--------------DTENVSSNTMASARWDHVTNGRLSDVCG----------------LGNGAG-TMMFSGANFREVETLDVDMRYGGKVLFLMKMGPTVPDASAVLCKPAYGGNVYLYYSLDGGGVWETLSILETFAYRKETFTEVEVDVPSTLNAASVRFRWKQENFENALEHWALDDVRVLSYFAEGWRETAAFESTVDVEHETLQEIRCCLNSEQCDL--------------SKNRQEAVDCAAY--------ITETSNERA------LLGAELFVLLAGLVSLARSLY-RTGEGMLLEGWEYAIPVFLRKKRAKIFMADDPVPGSMNKVFRLEVNLRWQTRFVALVGVPLGICWLYCATLLRNFFLVEELTLLPDVSPQSVR-VKVHVSGLFILATFIDVHSAFLLARDVVCVLPLWLPKVDVDLRPSAGWLRIGTQQISLKDIKDTEMFSRRFCLWLAAGYIAGVMPWCLVSLILKYSYIPYPVARYVTVSLGTVVLARAWLGPEWVVKTAYSVRWLLTMDILRRDDIGNAFIAEKTK-HLVVCCAVFGTLLTM-VVLQLFNTRFFAIISAVALAMFAFYGLGLSVVQGLPITPRFHLTTISRGVMLRVHRRVVCPCERRLEQCGGMHSRDELVCVFVRDALTFNEMLRGDDTVD 3000
C +CYE +G C C+ + G G + S++D + A+ ++ EECRKCL GF RKCC E+YC+SCYF+TG+CP C + A + + + DPG PV+ G+ +V V L LA + + S+ +TVF CYG FP C +C+ G I GL +W C D TVNK+YG C++D+ ++ SD+ GFDFC +EF + G +VFED F+ W + E + M SA W + N + SD CG L +G + FSG + R ET+D++M +GGKV F+++MGP + C+P+Y G+V L YS D G W + + Y F + +P + + RFR+ Q +FE +H A+DDVR+ SYF GW F+ + + +++ +CC ++QC+ S + + D +Y E +A + GA ++ A L+ L + Y + +G +P RKK+ K+F D+ V N +F +E + WQ + V L+C + + L + L + ++ H +A +D + +AR VVC+LP WLP V+ DLRPS L + +IS+ DIKD F+ R+C LAA Y MPWCL+SL Y + V + L R + G + +K ++ W+ D RD+IG +T+ H V G ++ + L + + + +++A A+ F+G+ L Q LP+TP F +T I G+ +R + + CPC C GMHS D L+ +FV D + F +L+G D D
Sbjct: 25 CHVCYEISGRWREHLNMFVCDHCYAM--GTKHGDMKSEQDLLNEGDFDAKRGGDFAE--QENEECRKCLEPGFRRKCCKEYYCNSCYFETGNCPGCDRLSAPRGLGLFGLD-DPGAWPVIYGWCLSVFVTLAALALFVMIVVSDQLNPRTVFGHRCYGLFPQCDQ-IQCIEL-GGPINEGLVTQADWKYC-DMNTVNKVYGGTCLYDKPLFFQSDKALGFDFCRGPQVKALHQKHAWLGDEFDGNHFAGGFFVFEDNFDDWYNLSMYQKNEKYLFNDELAPKSYMKSALWFQMMNVKASDNCGSYVDPHPDFTGGHTRTLHSGDNKALYFSGFDNRYAETIDLNMLHGGKVSFMLRMGP---EGYGGKCEPSYNGDVTLAYSTDIGRTWFDIGTYQAVLYNTGPFFHISAALPEQGWSNTTRFRFYQGSFEEKRDHIAIDDVRIFSYFEHGWHHKQTFQKRKNKARKDIEKAQCCFETDQCETYGVRADGHGVTTLRSPSYKTCDDVPSYDEPRISHHYEEYGGPKASHRRFEVNGARFYIGCAALLLLLKYFYIKVVMPFFQKGCSAFVPEIFRKKKKKVFAVDEDVTLEDN-LFPIERDEMWQLYYTVGVSSAFVFFGLWCWGVSEDIVLYFPVHFLRRTEYEDTAYLEAHNCYFLFVAFLLDFKEFYYVARYVVCILPWWLPMVEADLRPSVNSLIVDDLKISMLDIKDVFRFNERWCQILAANYTFMSMPWCLISLWWSELNAVYVLDYVVNKFFAAIFLLRIFFGVDCFIKFVNAMEWMYKTDNKDRDEIGAVLTTFRTRAHGFYIMLVSGLVMAGGMKLSMRDDDLIIMSASIAAAVGFFHGIILGWFQALPLTPNFFITRIHDGMYVRYYHKRKCPCVAYCTYCQGMHSNDGLLVLFVEDEVRFMRVLKGYDNRD 934
BLAST of mRNA_Ecto-sp9_F_contig11.870.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMJ7_HETAK) HSP 1 Score: 315 bits (806), Expect = 6.610e-93 Identity = 180/536 (33.58%), Postives = 288/536 (53.73%), Query Frame = 1
Query: 1402 GPTVPDASAVLCKPAYGGNVYLYYSLDGGGVWETLSILETFAYRKETFTEVEVDVPSTLNAASVRFRWKQENFENALEHWALDDVRVLSYFAEGWRETAAFESTVDVEHETLQEIRCCLNSEQCDLSKNRQEAVDCAAYITET-SNERALLGAELFVLLAGLVSLARSLYRTGEGMLLEGWEYAIPVFLRKKRAKIFMADDPVPGSMNKVFRLEVNLRWQTRFVALVGVPLGICWLYCATLLRNFFLVEELTLLPDVSPQSVRVKVHVSGLFILATFIDVHSAFLLARDVVCVLPLWLPKVDVDLRPSAGWLRIGTQQISLKDIK---DTEMFSRRFCLWLAAGYIAGVMPWCLVSLILKYSYIPYPVARYVTVSLGTVVLARAWLGPEWVVKTAYSVRWLLTMDILRRDDIGNAFIAEKTKHLVVCCAVFGTLLTMVVLQLFNTRFFAI-ISAVALAMFAFYGLGLSVVQGLPITPRFHLTTIS---RGVMLRVHRRVVCPCERRLEQCGGMHSRDELVCVFVRDALTFNEMLRG 2985
GP V A +C PAY G V LYYSLD GG W L E Y K +FT V ++P+ ++ + RF+W+Q+ FE+A +HWALDDV++ F G+R T + + ++ ++CC +EQC+ R++ C + + + + G EL+++ AG +L R +Y + +L G E IP FL+KK A IF ADD + +K FR W+ +F+ L P ICW + A ++ N++LV++ + D +P +VHVS + +LAT++D + +AR VVCVL WLP +++D R + WLR+G I L+ I+ T R W Y+AG PW L SL+L+++YIP+ VAR+ + +G V+ RA+ GPE K V W + RD +G A +TK L + G +++ VVL + + + + L + FYG + GLP+ P++ +T + G+ + R ++CPC+ + M+++ E++ + + D F EMLRG
Sbjct: 1 GPQV--AGDTVCNPAYNGEVGLYYSLDQGGTWHQLKAYEPGVYAKSSFTAVYQEIPANASSNATRFKWEQKGFESARDHWALDDVQIHHAFEAGYRSTGWYAAAAAASAAGMEALQCCYKTEQCETLLARRDKGMCDRDLPGIDTTDYPIRGPELYIVFAGACALFRLVYNRVQLFILNGVETLIPSFLQKKTASIFHADDAPGDAASKHFRCYTTKEWRRKFLLLTAGPFLICWFWSAAMMENYYLVDD-SPTEDYTPFF---RVHVSAVLLLATYLDARELYHVARRVVCVLDRWLPVLEIDARLNNSWLRVGRDHIPLQKIRLLDKTSFEQNRRAGW---AYVAGAFPWALFSLVLRFNYIPFVVARWSSKLIGAVLCCRAYYGPELFQKVHALVVWCFAWSLDDRDVVGIAVEHPRTKLLTIHMGAGGAVISAVVLGILDWGLVGFGLFWLCLYLALFYGALVGCTHGLPVIPKYFVTAMDPDVNGLFIVYDREILCPCKYGGKMMREMNAKREVLLIMMEDDALFTEMLRG 527
BLAST of mRNA_Ecto-sp9_F_contig11.870.1 vs.
Match: Reelin (n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBY0_THAPS) HSP 1 Score: 277 bits (708), Expect = 4.330e-75 Identity = 229/846 (27.07%), Postives = 377/846 (44.56%), Query Frame = 1
Query: 667 ECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSCHVPAEKRIEYQRIPRD---PGVVPVLVGFFATVLVCLVTLAGVSVAIASNSAVIKTVFAQTCYGFFPSCTPGPKCVAYDSGDIGNGLEPITEW-------SACEDETTVNKIYGSFCVFDEEVYVYSDEKWGFDFCAEE-------------------FMSGSAGAYVFEDTFEMWDTENVSSNTMASARWDHVTNGRLSDVCGL--------GNGAG--------TMMFSGANFREVETLDVDMRYGGKVLFLMKMGPTVPDASAVLCKPAYGGNVYLYYSLDGGGVWETLSILETFAYRKETFTEVEVDVPSTLNAASVRFRWKQENFENALEHWALDDVRVLSYFAEGWRETAAFESTVDVEHETLQEIRCCLNSEQCDL-----SKNRQEAVDCAAYITETSNERALLGAELFVLLAGLVSLARSLYRTGEGMLLEGWEYAIPVFLR---KKRAKIFMADDPVPGSMN----KVFRLEVNLRWQTRFVALVGVPLGICWLYCATLLRNFFLVEELTLLPDVSPQSVRVKVHVSGLFILATFIDVHSAFLLARDVVCVLPLWLPK---VDVDLRPSAGWLRIGTQQISLKDIKDTEMFSRRFCLWLAAGYIAGVMPWCLVSLILKYSYIPYPVARYVTVSLGTVVLARAWLGPEWVVKTAYSVRWLLTMDILRRDDIGNAFIAEKTKHLVVCCAVFG-TLLTMVVLQLFNTR----------FFAIISAVALAMFAFYGLGLSVVQGLPITPRFHLTTI-SRGVMLRVHRRVVCPCERRLEQCGGMHSRDELVCVFVRDALTFNEMLRGD 2988
EC CL G R+CC +YC CY+++GHCP C K + I D P V V + +VL+ + ++++ + + T + TC G+FPSC CV +D G IG G +TE+ C+ T N++ GS CV+D+E+YV+S+ G+D C AG YVF+D FE+ +ASA W + NG SD CG+ GN AG ++F+G R+ T+ +++ +GG+V F +KMG D + CK AYGG+V L YS+ G W ++ +E + YR F + D+P + S FR++QE+F +HWA+DDVR+ + F W+ + F ++ E ++ ++CC N++QC + ++ E + L +EL+ L A++ Y+ I F+R ++ ++ M + GS + F +L WQ +++ L + + L+E L +L Q ++ V + ++ D + L V V W K + VDL P W+R+ + I L ++ E + +C L+ ++ G +P L SL + +P V T+ LG + + R G +V K A SV+W+L + RD+ G A T+ ++ +G T T+VV+ R F ++S + + + + ++ GLP+ P +LT S + + R +CPC CG +HSR L+ V V D TF ML+G+
Sbjct: 166 ECHMCLELGVFRRCCNAYYCHLCYYRSGHCPGC----AKEVPLTGIAIDKFDPSKFAVGVTWALSVLLVVSAATSLALSYWNVATYPVTTWGHTCRGWFPSCDL-VVCVDFDGG-IGYGEGGMTEYIPSTQPYRVCDRSLTANQVVGSACVYDQELYVFSNHTLGYDTCISSPRDEATRTKIITAPHPLLLLSDNLAGVYVFDDDFEL-------PPRLASAPWHEIVNGHYSDACGVNLKEPPERGNHAGYKAAKNENALVFTGVYKRQAATVGLNVEHGGRVEFHIKMGAITNDEFST-CKTAYGGDVTLEYSVSSGE-WIVMATMEVWKYRGHIFQFISHDIPIGARSNSTSFRFRQESFNALRDHWAIDDVRIRANFKPQWQHSIDFAQRQTIQDEDVKRMQCCYNTDQCSVYDKVGTQFDDEECNKIPGFDRAKRRARLKASELYNLFCLFAFFAKAAYQR-----------VIHRFVRIASLRQKELSMVESHRSGSTELFPRRSFYSVSHLSWQYAVASVLLASLAVV---------AYRLLEALKILRCFR-QGCKIDVTFVLVSLIGLMFDTRAIKDLLTSVFVVEVPWKRKPVDITVDLNPDKRWIRVRGRTIPLTELSSIERQNSLYCWLLSFCHVLGGLPIALGSLTARSFALPDRVEMISTI-LGVLAVLREVFGVSFVAKFALSVKWILAIRQDDRDEFGRAV----TRMGLLQQFTYGSTFTTVVVMSSVLARRVGDVSPGESFTLVVSCIVVG--GLFASLMGIMHGLPVIPEAYLTGWPSPSYAVSYYDRALCPCLFSCTYCGEVHSRQVLLVVSVDDMFTFKGMLKGN 968
BLAST of mRNA_Ecto-sp9_F_contig11.870.1 vs.
Match: MYND-type (domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T1J4_THAOC) HSP 1 Score: 211 bits (536), Expect = 2.960e-52 Identity = 181/717 (25.24%), Postives = 303/717 (42.26%), Query Frame = 1
Query: 667 ECRKCLRQGFARKCCGEFYCSSCYFQTGHCPSCHVPAEKRIEYQRIPRDPGVVPVLVGFFATVLVCLVTLAGVSVAIASNSAVIKTVFAQTCYGFFPSCTPGPKCVAYDSGDIGNG-LEPITE-WSACEDETTVNKIY--GSFCVFDEEVYVYSDEKWGFDFC----------------AEEFM---SGSAGAYVFEDTFEMWDTENVSSNTMASARWDHVTNGRLSDVCGLGNG------------AGTMMFSGANFREVETLDVDMRYGGKVLFLMKMGPTVPDASAVLCKPAYGGNVYLYYSLDGGGVWETLSILETFAYRKETFTEVEVDVPSTLNAASVRFRWKQENFENALEHWALDDVRVLSYFAEGWRETAAFESTVDVEHETLQEIRCCLNSEQCDLSKNRQEAVDCAAYITETSNERALLGA-ELFVLLAGLVSLARSLYRTGEGMLLEGWEYAIPVFLRKKRAKIFMADDPVPGSMNKVFRLEVNLRWQTRFVALVGVPLGIC--WLYCATLLRNFFLVEELTLLPDVSPQSVRVKVHVSGLFILATFIDVHSAFLLARDVVCVLPLWLPK---VDVDLRPSAGWLRI-GTQQISLKDIKDTEMFSRRFCLWLAAGYIAGVMPWCLVSLILKYSYIPYPVARYVTVSLGTVVLARAWLGPEWVVKTAYSVRWLLTMDILRRDDIGNAFIAEKTKHLVVCCAVFGTL 2691
ECR CL +G R+CCGE+YC +CY+ G CPSC A + P DP VL + + L+ AG++ A+ + TV+ TC G+F C CV +D+GD G L P E + AC +++ + GS C++D E+Y +SD + G+D C A+ + S G Y+ +D FE EN W + N S CG ++F+G R+ ++ V++ +GG V+F +KMGP + + C A+ G++ L + W ++ + +R F V+ ++P +FR Q +F+ +HWA+DD RV++ F W +++ FE V+ Q NSE+C A +T ++ L EL V+ ++S+A+S+Y G L+ G ++ D P + FR++ N WQ ++V WL+ + F VE L + LA F D+ + L V+ + W K V +DL P G+L + G I L I ++ +R + LA Y+ P + SL L+ +P ++ +G+ + R G + + ++ W+ + + RD+ G + + + LV CA++ L
Sbjct: 443 ECRACLERGALRRCCGEYYCHACYYLRGSCPSCGAEAVLTGAASKGPPDPSRGAVLASWALSAAFALLAAAGLAAALVGHWTRPTTVWGHTCKGWFADCDLS-VCVEHDAGDDGGSPLLPAPEPYDACSVGKSLSAPHQVGSACIYDAELYHWSDGRHGYDLCVASPREEGSRPRSVSSADPLLLHDSDGGGVYLIDDDFER-PAENAGF-------WSELVNAERSSACGANRNLPERGDYYSVKNTKALVFTGVGARQATSVPVNVSFGGTVMFYLKMGPIISSDEDIACLAAFTGDILLEFMTRDSREWTKIASYPVYKFRGHGFKFVQEEIPIDARTNGTQFRISQLSFDPLRDHWAIDDFRVMARFDPMWIDSSEFERRKAVQGNHAQTPSLGFNSEKC------------ATTVTGFKEAKSRLNLDELIVVYVCVISVAKSVY----GRLVRGISTGFKGSIQHVHPTTNAEDFP-----KRTFRIKPNPSWQYTASSIVLGTFAFSGYWLFRSA---GAFAVEGKFLTVSL----------------LAAFFDMKNIITLLSQVLHLGSPWKSKQAKVQIDLHPVRGFLGVEGMPPIPLARIASVDLQTRTLYVMLATNYVLAGFPLAVGSLALRSLKLPAG-TEFLPTLVGSFAMLRELFGLGAFARISLALFWIFSANNENRDEFGRSMMRDG---LVQQCALWAFL 1106
BLAST of mRNA_Ecto-sp9_F_contig11.870.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZW4_9ARCH) HSP 1 Score: 208 bits (530), Expect = 5.020e-52 Identity = 130/411 (31.63%), Postives = 205/411 (49.88%), Query Frame = 1
Query: 700 RKCCGEFYCSSCYFQTGHCPSCHVPAEK-RIEYQRIPRDPGV-VPVLVGFFATVLVCLVTLAGVSVAIASNSAVIKTVFAQTCYGFFPSCTPGPKCVAYD--SGDIGNGLEPITEWSACEDETTVNKIYGSFCVFDEEVYVYSDEKWGFDFCAEEFMSGSAGAYVFEDTFEMWDT-ENVSSNTMASARWDHVTNGRLSDVCGLGN---GAGTMMFSGANFREVETLDVDMRYGGKVLFLMKMGPTVPDASAVLCKPAYGGNVYLYYSLDGGGVWETLSILETFAYRKETFTEVEVDVPSTLNAASVRFRWKQENFENALEHWALDDVRVLSYFAEGWRETAAFESTVDVEHETLQEIRCCLNSEQCDLSKNRQEAVDCAAYITETSNERALLGAELFVLLAGLVSLARSLY 1908
R+CCG +YC +CY+ T C SC P + + Q + D + + V +G+ TV V +V + S IA++ + CYGFF +C CV + + + + L P++ W C ++ K+ CVFD+ +Y S K G+D C + F + G YVFEDTFE W N SSN M SA W +VTN + CG G G ++ F G R ET D+D+ GGK+ F + + P DA CK Y G V + +S+D G W TL+ + YR++ F+ + +P ++ RFR+ Q FE ++WALD+VRVL W+ + V E +Q+ +CC +++ C+ + C+ + + +E+ ++LA L+ + R Y
Sbjct: 3 RRCCGNYYCDTCYYNTPLCRSCATPVTNLKDDKQNLFADRALCISVTLGWLVTVFVAVVVIIFTSFVIAADVGTPVGINDYRCYGFFRTCDVS-ICVEMEQPNAEGTSPLPPMSTWKKCNLDSQY-KMESKACVFDQNLYHQSGRKLGYDICKDSF---NEGIYVFEDTFEHWQVLTNPSSNLMVSAHWLNVTNAQSDSYCGAGEVFGGKKSLRFGGEFMRAAETEDLDVERGGKLEFELFLPPIGFDAFNPFCKTGYIGTVLVDFSVDSGQNWITLARYDPALYRRDQFSLFSLQLPPEASSPHTRFRFYQPVFEALRDNWALDNVRVLRVLPLNWQTNGGYRENVRAGREEVQKGQCCADTDWCNKRLAEDDKEGCSDFAWYSQGRYLFRLSEVLLMLAVLIVVLRFFY 408
BLAST of mRNA_Ecto-sp9_F_contig11.870.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRH3_9STRA) HSP 1 Score: 137 bits (346), Expect = 3.380e-29 Identity = 108/374 (28.88%), Postives = 170/374 (45.45%), Query Frame = 1
Query: 1996 DDPVPGSMNKVFRLEVNLRWQTRFVALVGVPL-GICWLYCATLLRNFFLVEELTLLPDVSPQSVRVKVHVSG--------------------------LFILATFIDVHSAFLLARDVVCVLPLWLPKVDVDLRPSAGWLRIGTQQ-------ISLKDIKDTEMFSRRFCLWLAAGYIAGVMPWCLVSLILKYSYIPYP-VARYVTVSLGTVVLARAWLGPEWVVKTAYSVRWLLTMDILRRDDIGNAFIAEKTKHLVVCCAVFGTLLTMVVLQLFNTRF-----FAIISAVAL--AMFAFYGLGLSVVQGLPITPRFHLTTISRGVMLRVHRRVVCPCERRLEQCGGMHSRDELVCVFVRDALTFNEMLRGDD 2991
DD + VF L+V+++WQ RF A +P L L ++ + T P P + +H G + LA +D + ++++VVC+LP W+ V V+ P L +G++ + L +++ F+R C+ A YI P+ L SL + + +PY V R+ +LG VV RA GP+ VK A + +L + RR+ IG A E+TK + + +T+ +L + ++ VA+ A A YGL + VVQGLP+TP LT ++ G + RR CPC R +C MHSR ++V +FV D TF LRG++
Sbjct: 804 DDDGDAAQKHVFELDVDVKWQLRFAAATVLPFFAFLALAAGVALTDWIDADPATGRPG--PTVLYTPLHAFGGVVVFDFLWWVVPVGAVWVAPVPRFVVVALACVLDARPLYKVSKEVVCLLPHWVELVYVNTLPEVSALTVGSEDPKEAEVAVPLGAMEELSRFTRGQCVACALLYILACQPFALASLYVHFLRLPYDGVDRWAGGALGAVVCWRALCGPDVFVKAALAAGFLFSTVPDRRNLIGTAVCDERTKFIAGYSTLAALAITVPILCSDTSGHDRREGLEVLEGVAMVAAAAAVYGLFVGVVQGLPVTPAIRLTKVAGGHYVTYMRRTQCPCFHRFTECSTMHSRRQIVVLFVEDVTTFIGTLRGEN 1175
BLAST of mRNA_Ecto-sp9_F_contig11.870.1 vs.
Match: Reelin (n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8B481_CRAVI) HSP 1 Score: 63.2 bits (152), Expect = 3.420e-6 Identity = 43/155 (27.74%), Postives = 79/155 (50.97%), Query Frame = 1
Query: 1213 ENVSSNTMASARWDHVTNGRLSDVC-GLGNGAGTMMFSGANFREVETLDVDMRYGGKVLFLMKMGPTVPDASAVLCK-PAYGGNVYLYYSLDGGGVWETLSILETFAYRKETFTEVEVDVPSTLNAASVRFRWKQE---NFENALEHWALDDVRV 1662
+N ++ ++W V G+L C L G+ + F+G+N+R++ T+D+D+R V F+ +G D + + K P + +V L YS +GG WE L +++ Y++ + V +P + R RW Q ++ A WA+D+V +
Sbjct: 2949 DNFEDSSFDKSKWSLVEGGKLGKPCENLAEGSAAV-FTGSNYRQLVTIDLDLRNTRFVQFVASLGGVDVDPTCFIPKTPEH--SVILQYSNNGGVNWEDLHVMDFTTYKRPR--KEYVLLPQPARTKNTRLRWWQPLNADWVQAGPQWAIDNVLI 3098 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11.870.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig11.870.1 >prot_Ecto-sp9_F_contig11.870.1 ID=prot_Ecto-sp9_F_contig11.870.1|Name=mRNA_Ecto-sp9_F_contig11.870.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=1002bp MSPPWEPYPERKRKLEERARRHKSKANPQFPGGKQHAGSLGRRRNRNPATback to top mRNA from alignment at Ecto-sp9_F_contig11:52300..60187+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig11.870.1 ID=mRNA_Ecto-sp9_F_contig11.870.1|Name=mRNA_Ecto-sp9_F_contig11.870.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=7888bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11:52300..60187+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11:52300..60187+ >mRNA_Ecto-sp9_F_contig11.870.1 ID=mRNA_Ecto-sp9_F_contig11.870.1|Name=mRNA_Ecto-sp9_F_contig11.870.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=6012bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11:52300..60187+ (Ectocarpus species9 EcSCA_722f female)back to top |