mRNA_Ecto-sp9_F_contig1099.859.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1099.859.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ7_ECTSI) HSP 1 Score: 1038 bits (2683), Expect = 0.000e+0 Identity = 694/738 (94.04%), Postives = 704/738 (95.39%), Query Frame = 1
Query: 1 MPGARDAGSGGGLFSPGVLQQLDKENVVNTPARTPDRRRKLGSAIRGTSSAAAAGVGFKVFQQQGEASTRTSVAGQEASQLATDLSRAESEVARLKEEARQARRALDERNEMVEQLKASKANTKQRYTALLQSHEEANKELALLRTQKLDSSSDSGSGSVERLRATVENLETNNELLREERGSLQTRLAKRDAAVSAMKADLAAATQRDDALRQEVXXXXXXXDAAAAVSEAGAQAQWDLDKEALEARIGELETQAASSGRRCVELVAERDLLAEESARREKEHASTVASLRSEMQGLHRRTTADLGDWRQRYRQEVGAKKALEGQLERLVGASESVTRVIEKHAVLEASLQEAYGLLSQAVLAEERGXXXXXXXAARVVEGVLEHLMGRVFQATAATSGDEEEKGEDEEGRKEREADRRLSKEASDNLGEELEKLTADMEALRSFGLDEAHTFLEQAKSLETELEAVREKHAASVSDLEAARAHSEQEVERLAGMLERGQGEREELKLRLETAANELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERRAYAQKAEAXXXXXXXXXXXXXXXATQASALKAKAAAREATSPPTVSVTDWEAKQQELEEMEARLSTVVSKNQELERKVETVEAEGQEASLGSEERQAQVAALEAXXXXXXXXXXXXXXXXXXXXEAEWLMKKYALRNSTLCEKKVKDLQRRLAKATGKAATGDT 2214
MPGARDAGSGGGLFSPGVLQQLDKENVVNTPARTPDRRRKLGSAIRGTSSAAAAGVGFKVFQQQGEASTRTSVAGQEASQLATDLSRAESE+ARLKEEARQARRALDERNEMVEQLKASKANTKQRYTALLQSHEEANKEL LLRTQKLDSS DSGSG VE+LRATVENLETNNELLREERGSLQTRLAKRDAAVSAMKADLAAATQRDDALRQ+ DAAAA S+AGAQAQWDLDKEALEARIGELETQAASSGRRCVELVAERDLLAEESARREKEHASTVASLRSEMQGLHRRTTADLGDWRQRYRQEVGAK+ALEGQLERLV ASESVTRVIEKHAVLEASLQEAYGLLSQAVLAEERGXXXXXXXAARVVEGVLEHL+GRVFQATA TSGDEEE+GEDEEGRKEREADRRLSKEASDNLGEELEKLTADMEALRSFGLDEAHTFLEQAKSLETELEAVREKHAASVSDLEAARAHSE+EVERLAGMLERGQGEREELKLRLETAANEL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RRAYAQKAEA ATQASALKAKAAAREATSPP+VSVTDWEAKQQELEEMEARLSTVVSKNQELERKVETV+AEGQEASLGSEERQAQVAALEAXXXXXXXXXXXXXXXXXXXXEAEWLMKKYALRNSTLCEKKVKDLQRRLAKATGKAATGDT
Sbjct: 1 MPGARDAGSGGGLFSPGVLQQLDKENVVNTPARTPDRRRKLGSAIRGTSSAAAAGVGFKVFQQQGEASTRTSVAGQEASQLATDLSRAESELARLKEEARQARRALDERNEMVEQLKASKANTKQRYTALLQSHEEANKELELLRTQKLDSSGDSGSGIVEQLRATVENLETNNELLREERGSLQTRLAKRDAAVSAMKADLAAATQRDDALRQKADRLREELDAAAAASKAGAQAQWDLDKEALEARIGELETQAASSGRRCVELVAERDLLAEESARREKEHASTVASLRSEMQGLHRRTTADLGDWRQRYRQEVGAKRALEGQLERLVAASESVTRVIEKHAVLEASLQEAYGLLSQAVLAEERGXXXXXXXAARVVEGVLEHLLGRVFQATA-TSGDEEEEGEDEEGRKEREADRRLSKEASDNLGEELEKLTADMEALRSFGLDEAHTFLEQAKSLETELEAVREKHAASVSDLEAARAHSEREVERLAGMLERGQGEREELKLRLETAANELVINVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAYAQKAEAMEGENRALHEKLEGLATQASALKAKAAAREATSPPSVSVTDWEAKQQELEEMEARLSTVVSKNQELERKVETVKAEGQEASLGSEERQAQVAALEAXXXXXXXXXXXXXXXXXXXXEAEWLMKKYALRNSTLCEKKVKDLQRRLAKATGKAATGDT 737 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1099.859.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1099.859.1 >prot_Ecto-sp9_F_contig1099.859.1 ID=prot_Ecto-sp9_F_contig1099.859.1|Name=mRNA_Ecto-sp9_F_contig1099.859.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=739bp MPGARDAGSGGGLFSPGVLQQLDKENVVNTPARTPDRRRKLGSAIRGTSSback to top mRNA from alignment at Ecto-sp9_F_contig1099:17977..24569+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1099.859.1 ID=mRNA_Ecto-sp9_F_contig1099.859.1|Name=mRNA_Ecto-sp9_F_contig1099.859.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=6593bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1099:17977..24569+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1099:17977..24569+ >mRNA_Ecto-sp9_F_contig1099.859.1 ID=mRNA_Ecto-sp9_F_contig1099.859.1|Name=mRNA_Ecto-sp9_F_contig1099.859.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=4434bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1099:17977..24569+ (Ectocarpus species9 EcSCA_722f female)back to top |