mRNA_Ecto-sp9_F_contig10982.853.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10982.853.1
Unique NamemRNA_Ecto-sp9_F_contig10982.853.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Histone (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXM0_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 3.230e-74
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 
Query:    1 RKTLASRQGGGGSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 369
            RKTLASRQGGGGSAD GEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE
Sbjct:   22 RKTLASRQGGGGSADGGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 144
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Histone-fold-containing (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8D2_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.960e-45
Identity = 88/123 (71.54%), Postives = 100/123 (81.30%), Query Frame = 1 
Query:    1 RKTLASRQGGGGSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 369
            +KT A  Q  GG A+  +PRKRR  +PGE+ALKEIRAYQR+TELL+RKLPFARLVKEVQ + TP G  YRW A A+LALQEAAEAHLV LFEDANL  +HAKRVTIM +D QLARRIRG+ RE
Sbjct:   24 KKTAARAQAKGG-AEQLKPRKRR-HKPGEKALKEIRAYQRSTELLIRKLPFARLVKEVQTSFTPGGLQYRWAATAVLALQEAAEAHLVGLFEDANLACIHAKRVTIMPKDMQLARRIRGRLRE 144
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Histone (H3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIP5_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.780e-43
Identity = 81/112 (72.32%), Postives = 91/112 (81.25%), Query Frame = 1 
Query:   34 GSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 369
            G+A A    ++RR +PGE+ALKEIR YQR+TELL+RKLPFARLV+EVQE  TP G  YRW A ALLALQ AAEAHLV LFEDANL A+HAKRVTI  RD QLARRIRG+ RE
Sbjct:   12 GAAAAVRGARQRRHKPGEKALKEIRTYQRSTELLIRKLPFARLVREVQEMFTPRGVLYRWAADALLALQHAAEAHLVGLFEDANLAAIHAKRVTIQPRDMQLARRIRGRMRE 123
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2P3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.910e-42
Identity = 75/102 (73.53%), Postives = 89/102 (87.25%), Query Frame = 1 
Query:   64 RRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 369
            ++R+RPGERALKEIR YQR+T+LL+R+LPFARLV+EVQ ++    K YRWQA A+LALQEAAEAHL SLFEDANLCA+H KRVT+M +DFQLARRIRG  RE
Sbjct:   39 KKRYRPGERALKEIRYYQRSTDLLIRRLPFARLVREVQVSIVSNKKEYRWQADAILALQEAAEAHLSSLFEDANLCAIHGKRVTVMPKDFQLARRIRGPMRE 140
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Histone (H3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YX25_NANGC)

HSP 1 Score: 143 bits (360), Expect = 1.150e-41
Identity = 83/115 (72.17%), Postives = 92/115 (80.00%), Query Frame = 1 
Query:   25 GGGGSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 369
            G G S    E  K+RR RPG RAL+EIR YQRTTELLLR+LPFARLV+EVQ  ++   K YRWQA +LLALQEAAEAHLV LFEDANLCA+HAKRVTIM +D QLARRIRG  RE
Sbjct:   18 GKGTSPRKDEEPKKRRARPGMRALREIRQYQRTTELLLRRLPFARLVREVQGEIST--KQYRWQANSLLALQEAAEAHLVHLFEDANLCAIHAKRVTIMPKDMQLARRIRGPLRE 130
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JND5_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.240e-41
Identity = 75/103 (72.82%), Postives = 90/103 (87.38%), Query Frame = 1 
Query:   61 KRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 369
            K+ R RPG RALKEIR YQR+T+LLLRKLPFARLV+E+Q++     +  RWQA A++ALQEAAEAHLV+LF+DANLCA+HAKRVT+MVRD QLARRIRGQ+RE
Sbjct:   21 KKHRLRPGMRALKEIRKYQRSTDLLLRKLPFARLVREIQQSFVQ--RDLRWQAEAIIALQEAAEAHLVALFQDANLCAIHAKRVTLMVRDLQLARRIRGQARE 121
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDC5_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.270e-41
Identity = 76/101 (75.25%), Postives = 86/101 (85.15%), Query Frame = 1 
Query:   67 RRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 369
            RR RPGERALKEIR YQR+T+LL+RKLPFARLV+EV    T   K YRWQA+ALLALQE+AEAHLV LFEDANLC +H+KRVT+MV+D QLARRIRG  RE
Sbjct:    1 RRHRPGERALKEIRTYQRSTDLLIRKLPFARLVREVMLQFT--NKEYRWQASALLALQESAEAHLVHLFEDANLCTIHSKRVTVMVKDIQLARRIRGPMRE 99
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEK9_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.990e-41
Identity = 75/104 (72.12%), Postives = 92/104 (88.46%), Query Frame = 1 
Query:   58 RKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 369
            R++RR RPGERALKEIR YQ +T+LL+R+LPFARLV+E+Q+ L+   ++Y WQA+A+LALQEAAEAHLV LFED NLCA+HAKRVTIM +D QLARRIRGQ+RE
Sbjct:   47 RRKRRMRPGERALKEIRQYQNSTDLLIRRLPFARLVREIQQGLSR--RAYSWQASAILALQEAAEAHLVGLFEDCNLCAVHAKRVTIMPKDMQLARRIRGQTRE 148
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGE4_PYTOL)

HSP 1 Score: 142 bits (359), Expect = 3.700e-41
Identity = 79/109 (72.48%), Postives = 91/109 (83.49%), Query Frame = 1 
Query:   34 GSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQ 360
            G+  A  P+  RR+RPG  AL+EIR YQR+TELLLRKLPFARLV+E+Q   TP  + YRWQA ALLALQEAAEAHLV LFEDANLCA+HAKRVT+MV+D QLARRIRG+
Sbjct:   49 GTPSASAPK--RRYRPGTVALREIRFYQRSTELLLRKLPFARLVREIQMEFTP--REYRWQAEALLALQEAAEAHLVRLFEDANLCAIHAKRVTLMVKDIQLARRIRGR 153
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TAQ9_PHATR)

HSP 1 Score: 140 bits (352), Expect = 8.540e-41
Identity = 71/105 (67.62%), Postives = 92/105 (87.62%), Query Frame = 1 
Query:   55 PRKRRRFRPGERALKEIRAYQRTTELLLRKLPFARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALHAKRVTIMVRDFQLARRIRGQSRE 369
            P+++RR RPG++ALKEI+ YQ++T+LL+R+LPFARLV+E+Q  ++   ++YRWQ  A+LALQEA+EAHLVSLFED NLCALH KRVTIM +D QLARRIRGQ+RE
Sbjct:    2 PKRKRRMRPGQKALKEIKMYQKSTDLLIRRLPFARLVREIQMEMSR--EAYRWQGTAILALQEASEAHLVSLFEDTNLCALHGKRVTIMPKDMQLARRIRGQTRE 104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10982.853.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Histone3.230e-7499.19domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Histone-fold-containing1.960e-4571.54protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Histone2.780e-4372.32H3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A8... [more]
Hypothetical1.910e-4273.53protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Histone1.150e-4172.17H3 n=1 Tax=Nannochloropsis gaditana (strain CCMP52... [more]
Hypothetical1.240e-4172.82protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Hypothetical1.270e-4175.25protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical1.990e-4172.12protein n=1 Tax=Pseudo-nitzschia australis TaxID=4... [more]
Uncharacterized3.700e-4172.48protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Hypothetical8.540e-4167.62protein n=2 Tax=Phaeodactylum tricornutum TaxID=28... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10982contigEcto-sp9_F_contig10982:153..2257 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score227.6
Seed ortholog evalue3.1e-57
Seed eggNOG ortholog2880.D7FXM0
Preferred nameCENPA
KEGG koko:K11253,ko:K11495
KEGG Pathwayko05034,ko05202,ko05322,map05034,map05202,map05322
GOsGO:0000003,GO:0000041,GO:0000070,GO:0000132,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000281,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000785,GO:0000786,GO:0000788,GO:0000790,GO:0000792,GO:0000793,GO:0000794,GO:0000819,GO:0000910,GO:0000939,GO:0000941,GO:0001817,GO:0001818,GO:0001889,GO:0001932,GO:0001934,GO:0002526,GO:0002577,GO:0002578,GO:0002583,GO:0002584,GO:0002589,GO:0002590,GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0002697,GO:0002698,GO:0002700,GO:0002701,GO:0002703,GO:0002704,GO:0002706,GO:0002707,GO:0002709,GO:0002710,GO:0002718,GO:0002719,GO:0002724,GO:0002725,GO:0002791,GO:0002793,GO:0002819,GO:0002820,GO:0002822,GO:0002823,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003774,GO:0003777,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005721,GO:0005727,GO:0005729,GO:0005737,GO:0005768,GO:0005769,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005887,GO:0005938,GO:0006276,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006338,GO:0006355,GO:0006357,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006952,GO:0006953,GO:0006954,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007080,GO:0007088,GO:0007154,GO:0007162,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007275,GO:0007346,GO:0007565,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009267,GO:0009566,GO:0009567,GO:0009605,GO:0009719,GO:0009790,GO:0009792,GO:0009889,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009897,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010039,GO:0010106,GO:0010468,GO:0010469,GO:0010556,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010817,GO:0010862,GO:0010948,GO:0010959,GO:0012505,GO:0015031,GO:0015629,GO:0015630,GO:0015682,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019219,GO:0019220,GO:0019222,GO:0019237,GO:0019725,GO:0019953,GO:0022402,GO:0022407,GO:0022408,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030001,GO:0030003,GO:0030010,GO:0030100,GO:0030155,GO:0030162,GO:0030509,GO:0030541,GO:0030543,GO:0030863,GO:0030864,GO:0030881,GO:0031055,GO:0031099,GO:0031100,GO:0031224,GO:0031226,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031329,GO:0031330,GO:0031399,GO:0031401,GO:0031410,GO:0031490,GO:0031491,GO:0031492,GO:0031497,GO:0031618,GO:0031667,GO:0031668,GO:0031669,GO:0031935,GO:0031937,GO:0031974,GO:0031981,GO:0031982,GO:0032091,GO:0032092,GO:0032268,GO:0032269,GO:0032270,GO:0032434,GO:0032435,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032886,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033365,GO:0033554,GO:0033572,GO:0034080,GO:0034220,GO:0034502,GO:0034506,GO:0034508,GO:0034613,GO:0034622,GO:0034724,GO:0034728,GO:0034755,GO:0034756,GO:0039706,GO:0040001,GO:0042176,GO:0042177,GO:0042221,GO:0042325,GO:0042327,GO:0042445,GO:0042446,GO:0042592,GO:0042594,GO:0042886,GO:0043044,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043235,GO:0043269,GO:0043393,GO:0043486,GO:0043505,GO:0043565,GO:0043933,GO:0044085,GO:0044092,GO:0044093,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044454,GO:0044459,GO:0044464,GO:0044703,GO:0044706,GO:0044815,GO:0044877,GO:0045132,GO:0045177,GO:0045178,GO:0045184,GO:0045786,GO:0045807,GO:0045839,GO:0045861,GO:0045930,GO:0045937,GO:0046602,GO:0046603,GO:0046605,GO:0046606,GO:0046634,GO:0046636,GO:0046821,GO:0046883,GO:0046887,GO:0046916,GO:0048259,GO:0048260,GO:0048285,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0048871,GO:0048878,GO:0050000,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050801,GO:0050863,GO:0050865,GO:0050866,GO:0050868,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051098,GO:0051099,GO:0051100,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051250,GO:0051252,GO:0051276,GO:0051293,GO:0051294,GO:0051301,GO:0051303,GO:0051304,GO:0051307,GO:0051310,GO:0051321,GO:0051382,GO:0051383,GO:0051493,GO:0051494,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0055037,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060255,GO:0060341,GO:0060393,GO:0060586,GO:0060627,GO:0060968,GO:0061008,GO:0061136,GO:0061638,GO:0061640,GO:0061641,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070199,GO:0070507,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0071103,GO:0071241,GO:0071248,GO:0071281,GO:0071310,GO:0071363,GO:0071459,GO:0071495,GO:0071496,GO:0071702,GO:0071705,GO:0071772,GO:0071773,GO:0071824,GO:0071840,GO:0071944,GO:0072512,GO:0072594,GO:0080090,GO:0090087,GO:0090092,GO:0090100,GO:0090276,GO:0090277,GO:0097159,GO:0097286,GO:0097421,GO:0097708,GO:0098552,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098687,GO:0098711,GO:0098739,GO:0098771,GO:0098796,GO:0098797,GO:0098802,GO:0098813,GO:0099568,GO:0099587,GO:0140013,GO:0140014,GO:1900120,GO:1900121,GO:1900122,GO:1900390,GO:1901363,GO:1901799,GO:1902275,GO:1902850,GO:1903037,GO:1903038,GO:1903046,GO:1903047,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903506,GO:1903530,GO:1903532,GO:1903827,GO:1904282,GO:1904283,GO:1904432,GO:1904434,GO:1904435,GO:1904437,GO:1905269,GO:1990357,GO:1990459,GO:1990641,GO:1990712,GO:1990837,GO:2000008,GO:2000058,GO:2000059,GO:2000112,GO:2000272,GO:2000273,GO:2001141,GO:2001185,GO:2001186,GO:2001252
EggNOG free text desc.protein heterodimerization activity
EggNOG OGsCOG2036@1,KOG1745@2759
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHistone H3, probable CenH3
Ec32 orthologEc-28_002250.1
Exons4
Model size372
Cds size372
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10982.853.1prot_Ecto-sp9_F_contig10982.853.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10982 153..2257 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928330.2899148-CDS-Ecto-sp9_F_contig10982:152..2031622928330.2899148-CDS-Ecto-sp9_F_contig10982:152..203Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10982 153..203 -
1692277835.5910769-CDS-Ecto-sp9_F_contig10982:152..2031692277835.5910769-CDS-Ecto-sp9_F_contig10982:152..203Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10982 153..203 -
1622928330.3633497-CDS-Ecto-sp9_F_contig10982:866..9471622928330.3633497-CDS-Ecto-sp9_F_contig10982:866..947Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10982 867..947 -
1692277835.6066213-CDS-Ecto-sp9_F_contig10982:866..9471692277835.6066213-CDS-Ecto-sp9_F_contig10982:866..947Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10982 867..947 -
1622928330.3799534-CDS-Ecto-sp9_F_contig10982:1747..18251622928330.3799534-CDS-Ecto-sp9_F_contig10982:1747..1825Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10982 1748..1825 -
1692277835.61507-CDS-Ecto-sp9_F_contig10982:1747..18251692277835.61507-CDS-Ecto-sp9_F_contig10982:1747..1825Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10982 1748..1825 -
1622928330.4192572-CDS-Ecto-sp9_F_contig10982:2095..22571622928330.4192572-CDS-Ecto-sp9_F_contig10982:2095..2257Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10982 2096..2257 -
1692277835.6230857-CDS-Ecto-sp9_F_contig10982:2095..22571692277835.6230857-CDS-Ecto-sp9_F_contig10982:2095..2257Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10982 2096..2257 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10982.853.1

>prot_Ecto-sp9_F_contig10982.853.1 ID=prot_Ecto-sp9_F_contig10982.853.1|Name=mRNA_Ecto-sp9_F_contig10982.853.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=124bp
RKTLASRQGGGGSADAGEPRKRRRFRPGERALKEIRAYQRTTELLLRKLP
FARLVKEVQETLTPAGKSYRWQAAALLALQEAAEAHLVSLFEDANLCALH
AKRVTIMVRDFQLARRIRGQSRE*
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mRNA from alignment at Ecto-sp9_F_contig10982:153..2257-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10982.853.1 ID=mRNA_Ecto-sp9_F_contig10982.853.1|Name=mRNA_Ecto-sp9_F_contig10982.853.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2105bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10982:153..2257- (Ectocarpus species9 EcSCA_722f female)
AGGAAAACTTTGGCGTCAAGACAGGGAGGCGGGGGATCCGCTGACGCCGG
CGAACCTCGGAAGCGAAGGCGTTTCCGTCCAGGGGAGCGGGCTTTGAAGG
AGATCAGGGCTTACCAGCGCACGACGGAGCTGCTCCTTAGGAAGCTTCCT
TTCGCGCGGTTGGTGCGTGGTGTATTGTTACCTGTTGGTGGCGGTATTGT
CGTTGTTGTTGTTGGTGTTGCTGCTGTCGTTGTTGAGTTGTTGTAACTGC
AACTGTTGTTGCTATCGTCACTGTTGGTGGTGGTAACTTACGCTTGACTG
TCACTTTTTTCCCCATCTGTGCAGCAACCTATCGTAGATGTAATAGACCC
CGAGTATGTATCGTAAATCGCTGCTGTTGTTGCCGCTGCTGCTACTGTTG
TTTTGCGGTGGCCTTCCTTCCTCCTCACGCAGGTGAAGGAGGTGCAGGAG
ACGTTGACACCAGCAGGGAAGTCGTACCGGTGGCAGGCGGCGGCTCTGCT
GGCGTTACAGGTGCGAGGAATATGTCCACCTTCTGCGTGTTGCGTTGCAT
GCACTGCTGGTCCGAAGCAAGCAACGTACCTACGCTGCTGAAAGTTTTAC
GAGAAGTGGCTGTTGAACGGATGTTGGGTTCCTTACCATCCTAGTTTTGG
TGGACGCTGATTTGTTCGCCTGTTGGTATGTTTTCGGACGCACTAGCCCA
GGTCTTACAGGGAGAAGGCCACACAAAAGTTTTGTTTTTTTGTCCTCCAA
CAATCGAGTGAAACGTGTGAACCAGGATAAAGGTATCTTCCTAGCAGCGG
TAGTGACGCACGTACAACCAGTACAATGAGGATCCGAAGCCCTACGAACA
ATTTTCTCTGGGTCAGAAGATATTTACAAAGAAAGATTCTCCGCCTGCTG
TGACCAGCCGTCAAAGGTTAAACATAAGCACCTGAGATCCCTCCCAAAGC
CGGAAGGGGTGCGGGTCTGCTGGTTGTTATCGTTACGAACTACAACCTCT
GCATTGGTGTGATGTCGTCTTCCTGTAGTGGAAAGACATACGCTCCACGC
CAGTGTGAACGTTCGTGTCACCCCCCTTTCTGAAAATGAGCCCGAGTATG
TTCATATATTTTGGCAATGAATGGACAACATGACCACTCGCAAGTCTTCT
TTTAGGTGGCGCGACTTTCGGCTGGTGGGGGACTGGTGGGGATTGTACAG
CAGTCAAAGGCAACATATATGTATGTGTCTTTATAACCCGCTCGTCATTT
TCTGTACGCTGTCTCTGGATTGCGTTTACTTTCTTGTTGCCTTGTTGCCG
AAACACGCAGGAGGCGGCGGAAGCTCACCTAGTGTCTCTCTTCGAGGACG
CAAACCTCTGCGCACTACACGCCAAGCGAGTGACGATAATGGTGAGAGTC
GTCACGATCTATCTGCTCCAAACTGCTGCGTGAGAGCACGGATGACTTGT
ACAATGAACGACGCGCGAATGGCGGTAGAACCTCGCGGCATCCGATTCGT
AGACGAGTTGAAAGGGCATAGGATAACGTCGCGCCCCGAATTAGTAACGT
TCTGGAAGCAAAGTGAGTGAGTGACGGAAGGAAGGATGAACGGAAAATAA
CGAAACGAGGGTTGCATGCATTAGATGCACTGCACTCGGCGGTTGGGGAA
ACAACGCCTACGTGCGATCGATGATTTATCTCGCGGAGAGGGGGATGGCC
TTCCGTTGTTTCGGGTGCGAAGCAAGGCCCATTTTTTTTTCTTTCGCTGA
ATCAGGTGCTTCTGCTTGGAGACCAGACCATATACGTACCAACTGATTTT
TTGTTGGGGAAGGCATGATAGACGCATTCTTGGGGGGTTGGGTGCGCAGC
CGAAGAAGACCTCCTCAACAAGCGTGAGGCAGGCAGGCTTCTGCCACGTT
CACGCTAACAATGGCTGAAGCCGACACACCAGAACGCGTTGGAACCGTTG
TGCGGAGACGGTATCAATAACCGTGTGTTTTTGTTTGCTCTTTTGCTCTG
CCCGACCCTAGCTCTTGTGTCCCGCCGCTTGATTCTGTTGTATGGCAAAC
GAAGGTCCGGGACTTCCAGCTAGCTCGCAGGATTCGAGGGCAAAGCCGAG
AGTGA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10982:153..2257-

>mRNA_Ecto-sp9_F_contig10982.853.1 ID=mRNA_Ecto-sp9_F_contig10982.853.1|Name=mRNA_Ecto-sp9_F_contig10982.853.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=744bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10982:153..2257- (Ectocarpus species9 EcSCA_722f female)
AGGAAAACTTTGGCGTCAAGACAGGGAGGCGGGGGATCCGCTGACGCCGG
CGAACCTCGGAAGCGAAGGCGTTTCCGTCCAGGGGAGCGGGCTTTGAAGG
AGATCAGGGCTTACCAGCGCACGACGGAGCTGCTCCTTAGGAAGCTTCCT
TTCGCGCGGTTGAGGAAAACTTTGGCGTCAAGACAGGGAGGCGGGGGATC
CGCTGACGCCGGCGAACCTCGGAAGCGAAGGCGTTTCCGTCCAGGGGAGC
GGGCTTTGAAGGAGATCAGGGCTTACCAGCGCACGACGGAGCTGCTCCTT
AGGAAGCTTCCTTTCGCGCGGTTGGTGAAGGAGGTGCAGGAGACGTTGAC
ACCAGCAGGGAAGTCGTACCGGTGGCAGGCGGCGGCTCTGCTGGCGTTAC
AGGTGAAGGAGGTGCAGGAGACGTTGACACCAGCAGGGAAGTCGTACCGG
TGGCAGGCGGCGGCTCTGCTGGCGTTACAGGAGGCGGCGGAAGCTCACCT
AGTGTCTCTCTTCGAGGACGCAAACCTCTGCGCACTACACGCCAAGCGAG
TGACGATAATGGAGGCGGCGGAAGCTCACCTAGTGTCTCTCTTCGAGGAC
GCAAACCTCTGCGCACTACACGCCAAGCGAGTGACGATAATGGTCCGGGA
CTTCCAGCTAGCTCGCAGGATTCGAGGGCAAAGCCGAGAGTGAGTCCGGG
ACTTCCAGCTAGCTCGCAGGATTCGAGGGCAAAGCCGAGAGTGA
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