mRNA_Ecto-sp9_F_contig1079.688.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1079.688.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R3_9PHAE) HSP 1 Score: 331 bits (849), Expect = 7.480e-102 Identity = 180/232 (77.59%), Postives = 182/232 (78.45%), Query Frame = 1
Query: 1 LSVGDGANDVPMLQSAHVGVGIHGLEGAQAVNNSDYSLGQFRFLKKLLLVHGRWSYRRICKVTVYMFYKNALLVLPQFFFAFFSLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQDVTSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGVLPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSVFVSVFALSLGSFIIAFFFFSEI 696
LSVGDGANDVPMLQ VTVYMFYKNALLVLPQFFFAF SLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQD+TSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGVLPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSV V VFALSLGSFIIAFFFFSE+
Sbjct: 954 LSVGDGANDVPMLQ-----------------------------------------------VTVYMFYKNALLVLPQFFFAFLSLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQDITSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGVLPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSVIVLVFALSLGSFIIAFFFFSEM 1138
BLAST of mRNA_Ecto-sp9_F_contig1079.688.1 vs.
Match: Phospholipid-transporting (ATPase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGS7_9STRA) HSP 1 Score: 280 bits (716), Expect = 1.110e-82 Identity = 142/297 (47.81%), Postives = 200/297 (67.34%), Query Frame = 1
Query: 1 LSVGDGANDVPMLQSAHVGVGIHGLEGAQAVNNSDYSLGQFRFLKKLLLVHGRWSYRRICKVTVYMFYKNALLVLPQFFFAFFSLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQDVTSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGVLPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSVFVSVFALSLGSFIIAFFF---FSEISFFTADLPQ--ISGTMRVMGGSAWFWLTLIITTSASLLLSYFGIAWAALFGTTRDVVGQEIS 876
LS+GDGANDVPM+Q+AH+G+GI GLEG QAVN SDY++GQFRFLK LLLVHGRW+ RR +T+Y+FYKNA+LVLPQF+F F+SL SGQNFYYD +YQ +N FFT LPI + DQD ++ VALA+P LY+DGI+R F+T +IFW WM EG +H IV +P+ A+G+ + G+ +GLW YGL+V F V+VA R+ +E WT + + +S+G + ++ F E F L I GT + + +WL +++ +L ++ A A++ +R +G+EI+
Sbjct: 863 LSIGDGANDVPMIQTAHIGIGIFGLEGQQAVNASDYAIGQFRFLKSLLLVHGRWNLRRCALLTLYLFYKNAVLVLPQFYFGFYSLMSGQNFYYDFMYQVFNTFFTGLPIFVVSSFDQDASATVALAYPQLYKDGIERRFITHRIFWTWMIEGMLHGAIVMFVPLAAVGSFNIFENGQVMGLWEYGLLVMFLDVMVAQLRLGIETAYWTGMETVAYVVSVGIWWYVWYMGSKFVEFPFIPLFLGSYTIQGTYSELADNPAWWLITLVSLVLCMLPTFTFQAVKAIYAPSRSTIGREIT 1159
BLAST of mRNA_Ecto-sp9_F_contig1079.688.1 vs.
Match: Phospholipid-transporting (ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DI51_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.090e-75 Identity = 142/302 (47.02%), Postives = 198/302 (65.56%), Query Frame = 1
Query: 1 LSVGDGANDVPMLQSAHVGVGIHGLEGAQAVNNSDYSLGQFRFLKKLLLVHGRWSYRRICKVTVYMFYKNALLVLPQFFFAFFSLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQDVTSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGVLPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSVFVSVFALSLGSFIIAFFFFSEISFFTADLPQISGTMRVMGGSAWFWLTLIITTSASLLLSYFGIAWAALFGTTRDVVGQE----ISSAQRRR 894
LS+GDGANDVPMLQ+AHVGVGI GLEG QAVNNSDYS+GQFRFL+ LL VHGR++YRRI + Y+FYK+A+LVLPQFF+ SL SGQ Y D++YQ NV FT+ PI+ALGVLD+DV + AL+ P LY+DGI+R FL +F WM E +HA ++ LP+ + G VLP G+ V +W G +VF + V + R+A+E W V S+ LS+ + +++ ++F+ A P I G++ V S+ FW T ++ T+A +++ + + +F TR V +E + S R R
Sbjct: 776 LSIGDGANDVPMLQAAHVGVGIFGLEGQQAVNNSDYSIGQFRFLRNLLFVHGRFNYRRIATIVKYIFYKSAVLVLPQFFYGTVSLFSGQPIYEDIIYQLANVLFTATPIVALGVLDRDVPVDSALSTPALYRDGIERRFLNRSVFLAWMMEAIVHAILILFLPLLSFGYFDVLPSGKAVSIWELGTIVFLSFLTVVSLRLAVEVLEWQIVITSLILLSVALWWMSWV---VLNFWLAVAPDIYGSISVFPESSRFWFTYLLATTACFAITFVVESGSVVFAPTRSQVLRERLHALDSVDRER 1074
BLAST of mRNA_Ecto-sp9_F_contig1079.688.1 vs.
Match: Phospholipid-transporting (ATPase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D387_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.100e-67 Identity = 129/296 (43.58%), Postives = 181/296 (61.15%), Query Frame = 1
Query: 1 LSVGDGANDVPMLQSAHVGVGIHGLEGAQAVNNSDYSLGQFRFLKKLLLVHGRWSYRRICKVTVYMFYKNALLVLPQFFFAFFSLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQDVTSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGVLPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSVFVSVFALSLGSFIIAFFFFSEISFFTADL--PQIS-GTMRVMGGSAWFWLTLIITTSASLLLSYFGIAWAALFGTTRDVVGQEISS 879
LS+GDGANDVPM+Q+AH+GVGI GLEG QAVN++D+++GQFRFLK L+LVHGRW+ RR +T Y+FYKNALLVLPQFF SL SG +YDL T+LPI+ + DQDV +++ + +P LY+DG++R F+T FWRWM EG +H + A+G V G+ +GL+G G+V+ + V LVAN R+ +E WT + +S+ F + + S + F + P I GTM M +WFW T +T + + Y F +R +G+EI+S
Sbjct: 257 LSIGDGANDVPMIQTAHIGVGIFGLEGQQAVNSADFAIGQFRFLKPLMLVHGRWNLRRCSLLTCYLFYKNALLVLPQFFLGVRSLFSGMFTWYDLXXXXXXXXXTALPILFVATFDQDVNADIVMKYPSLYKDGLERKFMTHGSFWRWMFEGIMHGVVCYFFVEIAMGEDVVQSNGKAIGLFGAGIVMLWLVDLVANLRLGLEILYWTGYEAAFITVSILVFYVTWSVASSDNDFMVSVGYPNIVYGTMGWMMNGSWFWFTTFLTLTFCRMPMYTIYVVKRSFLPSRADIGREIAS 552
BLAST of mRNA_Ecto-sp9_F_contig1079.688.1 vs.
Match: PhoLip_ATPase_C (domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C810_SAPPC) HSP 1 Score: 214 bits (545), Expect = 3.080e-64 Identity = 122/287 (42.51%), Postives = 176/287 (61.32%), Query Frame = 1
Query: 1 LSVGDGANDVPMLQSAHVGVGIHGLEGAQAVNNSDYSLGQFRFLKKLLLVHGRWSYRRICKVTVYMFYKNALLVLPQFFFAFFSLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQDVTSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGVLPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSVFVSVFALSLGSFIIAFFFFSEISFFTADLPQISGTMRVMGGSAWFW--LTLIITTSASLLLSYFGIAWAALFGTTRD 855
L++GDGANDVPM+Q AH+G+GI G EG QA N SDY++ QF+ LK+LLLVHGRW RR+ +T+YMFYKN LLVLPQFFF + L SGQ+ YYD LYQ +NV++T+LPI+ V DQDV++ +LA P LY + F++ ++FW W+ + + + +V + +GA G + G GLW +G V+ VVL+AN R+A+E K W F +LGSF+++FF + ++ + + G W LT + + +L FG+ + TT D
Sbjct: 29 LAIGDGANDVPMIQRAHIGIGISGAEGQQAANASDYAIPQFQCLKRLLLVHGRWINRRMAILTLYMFYKNVLLVLPQFFFGIYCLFSGQSTYYDPLYQLFNVWYTALPILLFSVYDQDVSAGTSLAFPTLYSS---QSFVSIRLFWIWIGDASFSSLVVLFVHVGASMYGPMAASGGDEGLWDFGFVMNGIVVLIANVRLALEVKCW-------FWGTLGSFVVSFFLYVSSAYVFSSIVAFGANFY---GVVWLVPNLTNGLLALLACVLCLFGVFAMKAYVTTFD 302
BLAST of mRNA_Ecto-sp9_F_contig1079.688.1 vs.
Match: Phospholipid-transporting (ATPase n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FF65_9STRA) HSP 1 Score: 211 bits (538), Expect = 2.450e-58 Identity = 118/246 (47.97%), Postives = 159/246 (64.63%), Query Frame = 1
Query: 1 LSVGDGANDVPMLQSAHVGVGIHGLEGAQAVNNSDYSLGQFRFLKKLLLVHGRWSYRRICKVTVYMFYKNALLVLPQFFFAFFSLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQDVTSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGVLPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSVFVSVFALSLGSFIIAFFFFSEISFFTADLPQISGTM 738
L+VGDGANDVPM+Q AHVGVGI G EG QA N SDYS+ +F+ LK+LLLVHGRW RR+ +T+YMFYKN LLVLPQFFF ++ SGQ+ YYD LYQ YNV FT+LP+ V DQ V++ ++L +P LY + F + + FW W+ + I + ++ +P+ LG G G GLW GLV+ VV+VAN R+A+E+K W FA SLG + + + FS + F +L + G +
Sbjct: 846 LAVGDGANDVPMIQRAHVGVGIMGAEGQQAANASDYSIPEFQSLKRLLLVHGRWMNRRMSILTLYMFYKNVLLVLPQFFFGYYCSFSGQSTYYDSLYQLYNVCFTALPVFLFSVSDQHVSAPMSLQYPSLYAS---QSFGSIRWFWLWILDACISSLVILFIPLAVLGHGPSSIHGFDQGLWDVGLVMNGAVVVVANLRLALESKCWFWFIPVGFASSLGLWSASAYAFSSLLSFGGELYAVLGVV 1088
BLAST of mRNA_Ecto-sp9_F_contig1079.688.1 vs.
Match: Phospholipid-transporting (ATPase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8N7_9STRA) HSP 1 Score: 209 bits (533), Expect = 9.960e-58 Identity = 112/238 (47.06%), Postives = 158/238 (66.39%), Query Frame = 1
Query: 1 LSVGDGANDVPMLQSAHVGVGIHGLEGAQAVNNSDYSLGQFRFLKKLLLVHGRWSYRRICKVTVYMFYKNALLVLPQFFFAFFSLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQDVTSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGVLPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSVFVSVFALSLGSFIIAFFFFSEISFFTAD 714
L+VGDGANDVPM+Q AHVG+GI G EG QA N SDY++ QFR L++LLLVHGRW RR+ +T+YMFYKN LLVLPQFFF + L SGQ+ YYD LYQ +NV++T+LPI+ V DQDV++ ++ + P LY + F++ ++FW WM + + + +V + +GA G + G GLW G ++ VVL+AN R+A+E K W V+ F S+ + + + FS + F A+
Sbjct: 840 LAVGDGANDVPMIQRAHVGIGISGAEGQQAANASDYAIPQFRCLRRLLLVHGRWMNRRMAILTLYMFYKNVLLVLPQFFFGCYCLFSGQSTYYDPLYQLFNVWYTALPILLFSVTDQDVSANMSQSFPTLYSS---QEFVSIRLFWIWMGDASFSSLVVLFVHIGAFTYGPMARSGLDEGLWDLGFIMNGIVVLIANLRLALEIKCWYWFTVAGFVFSIFLWFASSYVFSSVVAFGAN 1074
BLAST of mRNA_Ecto-sp9_F_contig1079.688.1 vs.
Match: Phospholipid-transporting (ATPase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QDY3_SAPDV) HSP 1 Score: 209 bits (532), Expect = 1.550e-57 Identity = 122/285 (42.81%), Postives = 171/285 (60.00%), Query Frame = 1
Query: 1 LSVGDGANDVPMLQSAHVGVGIHGLEGAQAVNNSDYSLGQFRFLKKLLLVHGRWSYRRICKVTVYMFYKNALLVLPQFFFAFFSLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQDVTSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGVLPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSVFVSVFALSLGSFIIAFFFFSEISFFTADLPQISGTMRVMGGSAWFW--LTLIITTSASLLLSYFGIAWAALFGTT 849
L++GDGANDVPM+Q AHVG+GI G EG QA N SDY++ QF+ LK+LLLVHGRW RR+ +T+YMFYKN LLVLPQFFF + L SGQ+ YYD LYQ +NV++T+LPI+ V DQDV++ +LA P LY + F++ ++FW W+ + + + +V + +GA G + GLW G V+ VVL+AN R+A+E K W F +LG F+ +FF + ++ + L G W LT + + L FG+ A + TT
Sbjct: 840 LAIGDGANDVPMIQRAHVGIGISGAEGQQAANASDYAIPQFQCLKRLLLVHGRWINRRMAILTLYMFYKNVLLVLPQFFFGIYCLFSGQSTYYDPLYQLFNVWYTALPILLFSVYDQDVSAGTSLAFPTLYSS---QSFVSIRLFWIWIGDASFSSLVVLFVHVGAFMYGPMAASSGDEGLWDLGFVMNGIVVLIANLRLALEVKCW-------FWGTLGGFVFSFFLYVSSAYVFSSLVSFGANFY---GVVWLVPNLTNGLLAVLACALCLFGVFAAKAYVTT 1111
BLAST of mRNA_Ecto-sp9_F_contig1079.688.1 vs.
Match: Phospholipid-translocating (P-type ATPase, flippase subfamily protein n=1 Tax=Toxoplasma gondii TgCatPRC2 TaxID=1130821 RepID=A0A151HG18_TOXGO) HSP 1 Score: 201 bits (511), Expect = 3.080e-57 Identity = 108/232 (46.55%), Postives = 148/232 (63.79%), Query Frame = 1
Query: 1 LSVGDGANDVPMLQSAHVGVGIHGLEGAQAVNNSDYSLGQFRFLKKLLLVHGRWSYRRICKVTVYMFYKNALLVLPQFFFAFFSLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQDVTSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGV-LPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSVFVSVFALSLGSFIIAFFFFSE 693
L++GDGAND M+QSA +G+G+ G EG QA N SDY L QFRFL LLL HG W+YRRI K+ +YMFYKN +LVLP FFF + SL SGQ FY++ LYQ YNV FT++PI GV DQDV ++AL +P LY+ G ++L ++F +WM G A ++ +P G V GR + LW G V+F ++V N +V +E T++ + F +SL + ++ F FS
Sbjct: 133 LAIGDGANDCNMIQSADIGIGLKGEEGMQAFNCSDYGLVQFRFLLPLLLTHGSWNYRRISKLVLYMFYKNLVLVLPMFFFGYISLFSGQKFYFEFLYQMYNVVFTAIPITLYGVFDQDVDKKLALKYPQLYRCGQIDLYLNLRVFLKWMLNGVWQAIVIFVVPTFVFGCNAVPTTTGRTMDLWMVGTVMFMMNMIVVNIKVLLETYYLTTIIWAGFYISLLACLLFVFLFSS 364
BLAST of mRNA_Ecto-sp9_F_contig1079.688.1 vs.
Match: Phospholipid-transporting (ATPase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2P2_9STRA) HSP 1 Score: 208 bits (529), Expect = 3.980e-57 Identity = 111/238 (46.64%), Postives = 159/238 (66.81%), Query Frame = 1
Query: 1 LSVGDGANDVPMLQSAHVGVGIHGLEGAQAVNNSDYSLGQFRFLKKLLLVHGRWSYRRICKVTVYMFYKNALLVLPQFFFAFFSLSSGQNFYYDLLYQSYNVFFTSLPIIALGVLDQDVTSEVALAHPILYQDGIQRVFLTPQIFWRWMSEGAIHAGIVTALPMGALGAGGVLPEGRGVGLWGYGLVVFFCVVLVANGRVAMENKLWTSVFVSVFALSLGSFIIAFFFFSEISFFTAD 714
L++GDGANDVPM+Q AHVG+GI G EG QA N SDY++ QF+ L++LLLVHGRW RR+ +T+YMFYKN LLVLPQFFF + L SGQ+ YYD LYQ +NV++T+LPI+ V DQDV++ ++A P LY + F+ ++FW W+++ + + +V + +GA G + G GLW G ++ VVL+AN R+A+E K W + V F SL ++ + + FS + F A+
Sbjct: 845 LAIGDGANDVPMIQRAHVGIGISGAEGQQAANASDYAIPQFQCLQRLLLVHGRWINRRMAILTLYMFYKNVLLVLPQFFFGCYCLFSGQSTYYDPLYQLFNVWYTALPILLFSVYDQDVSAASSVAFPTLYSS---QSFVNIRLFWVWIADASFSSLVVLFVHVGAFMYGPLSTNGLDEGLWDLGFIMNGIVVLIANLRLALEVKCWFPLTVGGFLFSLLLWLFSSYVFSSVVSFGAN 1079 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1079.688.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1079.688.1 >prot_Ecto-sp9_F_contig1079.688.1 ID=prot_Ecto-sp9_F_contig1079.688.1|Name=mRNA_Ecto-sp9_F_contig1079.688.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=299bp LSVGDGANDVPMLQSAHVGVGIHGLEGAQAVNNSDYSLGQFRFLKKLLLVback to top mRNA from alignment at Ecto-sp9_F_contig1079:17891..20890- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1079.688.1 ID=mRNA_Ecto-sp9_F_contig1079.688.1|Name=mRNA_Ecto-sp9_F_contig1079.688.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3000bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1079:17891..20890- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1079:17891..20890- >mRNA_Ecto-sp9_F_contig1079.688.1 ID=mRNA_Ecto-sp9_F_contig1079.688.1|Name=mRNA_Ecto-sp9_F_contig1079.688.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1794bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1079:17891..20890- (Ectocarpus species9 EcSCA_722f female)back to top |