prot_Ecto-sp9_F_contig10745.648.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig10745.648.1
Unique Name	prot_Ecto-sp9_F_contig10745.648.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	304

Homology

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BLAST of mRNA_Ecto-sp9_F_contig10745.648.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ1_ECTSI)

HSP 1 Score: 577 bits (1488), Expect = 9.260e-208
Identity = 294/303 (97.03%), Postives = 298/303 (98.35%), Query Frame = 0

Query:    1 MVLGFIGALGLWFLRSHLGGKALDAVKDQVEEACPLEPVEVEELRCSNDFPPDVFEKVLDSVRRAFPSGRATYPEFARHVTSSGLLPEPLSMGFLLDRMALTAAAHPGILGAAARGETPHSGGSSGEGGGGGWASSCADAVELEVDFLMVAFSAAVNTRPAERVRQLWDMAQGRSMGAADGGRDQDTDEGALLPASKAISLVGMLMASHQLPSGRYAVKDESRVWPVQQYRLASGRDAFLEGLLSLHEDEEKRTKGWIERKLAPAYDPAKEEQISFELFERVLRSGPVCAWGECLGIRNRDKL 303
            MVLGFIGALGLWFLRSHLGGKALDAVKDQVEEACPLEPVEVEELRCSNDFPPDVF KVLDSVRRAFPSGRATYPEFARHVTSSGLLPEPLSMGFLLDRMALTAAAHPGILGAAARGETPHSGGSSGEGG GGWASS ADAVELE++FLMVAFSAAVNTRPAER+RQLWDMAQGRSMGAADGGRDQDT EGALLPASKAI+LVGMLMASHQLPSGRYAVKDESRVWPVQQYRLASGRDAFLEGLLSLHEDEEKRTKGWIERKLAPAYDPA EEQISFELFERVLRSGPVCAWGECLGIRNRDKL
Sbjct:    1 MVLGFIGALGLWFLRSHLGGKALDAVKDQVEEACPLEPVEVEELRCSNDFPPDVFGKVLDSVRRAFPSGRATYPEFARHVTSSGLLPEPLSMGFLLDRMALTAAAHPGILGAAARGETPHSGGSSGEGGVGGWASSSADAVELEIEFLMVAFSAAVNTRPAERMRQLWDMAQGRSMGAADGGRDQDTGEGALLPASKAIALVGMLMASHQLPSGRYAVKDESRVWPVQQYRLASGRDAFLEGLLSLHEDEEKRTKGWIERKLAPAYDPANEEQISFELFERVLRSGPVCAWGECLGIRNRDKL 303

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BLAST of mRNA_Ecto-sp9_F_contig10745.648.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDJ3_9PHAE)

HSP 1 Score: 563 bits (1452), Expect = 2.920e-200
Identity = 288/303 (95.05%), Postives = 292/303 (96.37%), Query Frame = 0

Query:    1 MVLGFIGALGLWFLRSHLGGKALDAVKDQVEEACPLEPVEVEELRCSNDFPPDVFEKVLDSVRRAFPSGRATYPEFARHVTSSGLLPEPLSMGFLLDRMALTAAAHPGILGAAARGETPHSGGSSGEGGGGGWASSCADAVELEVDFLMVAFSAAVNTRPAERVRQLWDMAQGRSMGAADGGRDQDTDEGALLPASKAISLVGMLMASHQLPSGRYAVKDESRVWPVQQYRLASGRDAFLEGLLSLHEDEEKRTKGWIERKLAPAYDPAKEEQISFELFERVLRSGPVCAWGECLGIRNRDKL 303
            MVLGFIGALGLWFLRSHLGGKALDAVKDQVEEACPLEPVEVEELRCSNDFPPDVF+KVLDSVRRAFPSGRATYPEFARHVTSSGLLPEP+SMGFLLDRM LTAAAH GILGAAARGETPHSGGSSGEGG  GWAS  ADAVELEVDFLMVAFSAAVNTRPAER RQLWDMAQGRSMGA D G+DQDTDE  LLPASKAISLVGMLMASHQLPSGRYAVKDESRVWPVQQYRLASGRDAFLEGLLSLHEDEEKRTKGWIERKLAPAYDPA+EEQISFELFERVLRSGPVCAWGECLGIRNRDKL
Sbjct:  128 MVLGFIGALGLWFLRSHLGGKALDAVKDQVEEACPLEPVEVEELRCSNDFPPDVFDKVLDSVRRAFPSGRATYPEFARHVTSSGLLPEPMSMGFLLDRMVLTAAAHRGILGAAARGETPHSGGSSGEGGVEGWASISADAVELEVDFLMVAFSAAVNTRPAERTRQLWDMAQGRSMGATDRGQDQDTDEATLLPASKAISLVGMLMASHQLPSGRYAVKDESRVWPVQQYRLASGRDAFLEGLLSLHEDEEKRTKGWIERKLAPAYDPAQEEQISFELFERVLRSGPVCAWGECLGIRNRDKL 430

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BLAST of mRNA_Ecto-sp9_F_contig10745.648.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z460_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.200e-57
Identity = 125/294 (42.52%), Postives = 165/294 (56.12%), Query Frame = 0

Query:    1 MVLGFIGALGLWFLRSHLGGKALDAVKDQVEEACPLEPVEVEELRCSNDFPPDVFEKVLDSVRRAFPSGRATYPEFARHVTSSGLLPEPLSMGFLLDRMALTAAAHPGILGAAARGETPHSGGSSGEGGGGGWASSCADAVELEVDFLMVAFSAAVNTRPAERVRQLWDMAQGRSMGAADGGRDQDTDEGALLPASKAISLVGMLMASHQLPSGRYAVKDESRVWPVQQYRLASGRDAFLEGLLSLHEDEEKRTKGWIERKLAPAYDPAKEEQISFELFERVLRSGPVCAWGEC 294
            M++GF+GALG W  RS LG   ++A+K  VEE  PL P EVE+LRC ND PP +F +V+ +V+  FP G ATY +F   V +  LLP PL    LLDR  +      G+LG     +    GG++ E G              + D L+VAFS  VNT   ER+ QLW +       AA GG D  TD    +  +    L+ +L+A+ QLPS RYA+K   + WP QQYRLASG D     L  LH+D+EK+ KGWIERKL+     +    IS++ F+ +L    VCAWGEC
Sbjct:    1 MLIGFLGALGGWVYRSSLGTANMNALKQAVEEKSPLAPDEVEDLRCENDLPPSLFVEVVHNVQTEFPDGGATYSDFTDVVAA--LLPHPLEQAHLLDRYMVQLL---GVLGTRLW-QATLPGGATKEAG---HELGTDHKQTYDTDLLLVAFSMTVNTTVQERMEQLWHLI------AAQGG-DNTTD----VDYASMARLLDLLLATRQLPSSRYAIKSGEK-WPTQQYRLASGTDLLENALAELHDDDEKKKKGWIERKLSAPRAQSAASPISYQQFKDILECNCVCAWGEC 273

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig10745.648.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig10745.648.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
Uncharacterized	9.260e-208	97.03	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	2.920e-200	95.05	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	1.200e-57	42.52	protein n=1 Tax=Tribonema minus TaxID=303371 RepID...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..303
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.599

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig10745	contig	Ecto-sp9_F_contig10745:142..3553 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig10745.648.1	mRNA_Ecto-sp9_F_contig10745.648.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig10745 110..3586 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig10745.648.1 ID=prot_Ecto-sp9_F_contig10745.648.1|Name=mRNA_Ecto-sp9_F_contig10745.648.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=304bp
MVLGFIGALGLWFLRSHLGGKALDAVKDQVEEACPLEPVEVEELRCSNDF
PPDVFEKVLDSVRRAFPSGRATYPEFARHVTSSGLLPEPLSMGFLLDRMA
LTAAAHPGILGAAARGETPHSGGSSGEGGGGGWASSCADAVELEVDFLMV
AFSAAVNTRPAERVRQLWDMAQGRSMGAADGGRDQDTDEGALLPASKAIS
LVGMLMASHQLPSGRYAVKDESRVWPVQQYRLASGRDAFLEGLLSLHEDE
EKRTKGWIERKLAPAYDPAKEEQISFELFERVLRSGPVCAWGECLGIRNR
DKL*