mRNA_Ecto-sp9_F_contig107.623.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig107.623.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI) HSP 1 Score: 1473 bits (3813), Expect = 0.000e+0 Identity = 748/798 (93.73%), Postives = 774/798 (96.99%), Query Frame = 1
Query: 583 LWHTLGQDQTGSMAARPGTLPVELARLLDMFGGLSTLDLYQNSWEHPPEAIVAGGVQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANLILVGNKWDRVVTARGAVADDVERESRRWLKSWMEKAYGYQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRANLEEKWKAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHKRDSYGNIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRREEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEEGLFSLSLEYSEHDHMLKVEVLGGGDEVHAWAALSKVLSVMIKMLSEFPGLPCEPLFFCPQHKTKGMPIKKTDAPPGSGLVEESYFCPLCQDRTAGINLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVARQGCASQQGSNFKAGVSGSASSDISPSSRAPAPTRSXXXXXXXXXXXXXXXXXXSPTGQVVSGTPWYQDVKTFVGAASVACLTVFTVFAAKEDDDPRLWGVFLGLGMLLIGAEFFLIAREHKLLCCKPRVDAASAV 2976
LWHTLGQDQTGSMAARPGTLPV+LARLLD+F GL +LDL +N WEHPPEAIVAGGVQAVRGYYEAMF GGTTAVTRPLKVVI+GKETVGKTSLRRSITTGGPCMTQ+GGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVP+AN+ILVGNKWDRVV RG VADDVE ESRRWLKSWMEKA+G+QPHGLSLEDGVSLVSCAQS LGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRA+LEEKW AKVAELNGAGTPVAAPEAAM GAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSH+RDSYG+IDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDT PPEYSIRREEANQARKYDLTL+VACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAE+GLFSLSL+YSEHD+MLKVEVLGGG+EVHAWAALSKVLSVMIKMLSEFPGLPCEP+FFCPQHKTKGMPI+ TDAPPGSGLVE+ YFCPLCQD TAG NLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVAR+GCASQQGS+F+ GVSGS SSDISPSSRAPAPTRS XXXXXXXXXXXXXXXXXSPTGQV SGTPWYQDVKT+VGAASVACLTVF VFAAKEDDDPRLWGVFLG+GMLLIG EFFLIAREHKLLCCKPRVDAASAV
Sbjct: 372 LWHTLGQDQTGSMAARPGTLPVDLARLLDVFDGLRSLDLSRNPWEHPPEAIVAGGVQAVRGYYEAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPNANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYSIRREEANQARKYDLTLSVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEKGLFSLSLDYSEHDNMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIRTTDAPPGSGLVEKGYFCPLCQDPTAGNNLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVARKGCASQQGSHFEGGVSGSTSSDISPSSRAPAPTRSSXXXXXXXXXXXXXXXXXSPTGQV-SGTPWYQDVKTWVGAASVACLTVFGVFAAKEDDDPRLWGVFLGVGMLLIGGEFFLIAREHKLLCCKPRVDAASAV 1168
BLAST of mRNA_Ecto-sp9_F_contig107.623.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI) HSP 1 Score: 1387 bits (3590), Expect = 0.000e+0 Identity = 709/798 (88.85%), Postives = 743/798 (93.11%), Query Frame = 1
Query: 583 LWHTLGQDQTGSMAARPGTLPVELARLLDMFGGLSTLDLYQNSWEHPPEAIVAGGVQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANLILVGNKWDRVVTARGAVADDVERESRRWLKSWMEKAYGYQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRANLEEKWKAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHKRDSYGNIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRREEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEEGLFSLSLEYSEHDHMLKVEVLGGGDEVHAWAALSKVLSVMIKMLSEFPGLPCEPLFFCPQHKTKGMPIKKTDAPPGSGLVEESYFCPLCQDRTAGINLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVARQGCASQQGSNFKAGVSGSASSDISPSSRAPAPTRSXXXXXXXXXXXXXXXXXXSPTGQVVSGTPWYQDVKTFVGAASVACLTVFTVFAAKEDDDPRLWGVFLGLGMLLIGAEFFLIAREHKLLCCKPRVDAASAV 2976
LWHTLGQDQTGSMAARPGTLPV+LARLLD F GL TLDL +N WEHPPEAIVAGGVQAVRGYY+AMF GGTTAVTRPLKVVI+GKETVGKTSLRRSITTGGPCMTQ+GGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDAN+ILVGNKWDRVV RG VADDVE ESRRWLKSWMEKA+G+QPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRA+LEEKW AKVAELNGAGTPVAAPEAAM GAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSH+RDSYG+IDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDT PPEY I+ E+ ++A + DL LTVACSFSLGLPPGFVERLLARCCH+GYP+PFWRYGALIVGNGAE+GLFSLS+EYSE D +L +EV GG +EVHAWAALSKVLSVMIKMLSEFPGLPCE +FFCPQHKTKGMPI+ TD PGS LVEESYFC LCQDR AGI+LLAAALQVVEFSDE+F DEPLR++FAENAEKVARQGCA G N++ VSG ASS ISP +APA RS XXXXXXXXXXXXXXXX QV SGTPWYQDVKT VGAASVACLTVF VFAAKEDDDPRLWGVFLG+GMLLIGAEF LIAREHKLLCCKPRV+AASAV
Sbjct: 465 LWHTLGQDQTGSMAARPGTLPVDLARLLDRFDGLVTLDLSRNPWEHPPEAIVAGGVQAVRGYYDAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVVRTRGTVADDVECESRRWLKSWMEKAHGHQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHMGYPFPFWRYGALIVGNGAEKGLFSLSVEYSEEDKILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLAAALQVVEFSDEKFLDEPLREQFAENAEKVARQGCALWPGMNYEVEVSGPASSGISPGIQAPAQIRSSNXXXXXXXXXXXXXXXXXXXXQV-SGTPWYQDVKTLVGAASVACLTVFGVFAAKEDDDPRLWGVFLGVGMLLIGAEFVLIAREHKLLCCKPRVEAASAV 1261
BLAST of mRNA_Ecto-sp9_F_contig107.623.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 1135 bits (2935), Expect = 0.000e+0 Identity = 605/798 (75.81%), Postives = 658/798 (82.46%), Query Frame = 1
Query: 583 LWHTLGQDQTGSMAARPGTLPVELARLLDMFGGLSTLDLYQNSWEHPPEAIVAGGVQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANLILVGNKWDRVV-TARGAVADDVERESRRWLKSWMEKAYGYQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRANLEEKWKAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHKRDSYGNIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRREEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEEGLFSLSLEYSEHDHMLKVEVLGGGDEVHAWAALSKVLSVMIKMLSEFPGLPCEPLFFCPQHKTKGMPIKKTDAPPGSGLVEESYFCPLCQDRTAGINLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVARQGCASQQGSNFKAGVSGSASSDISPSSRAPAPTRSXXXXXXXXXXXXXXXXXXSPTGQVVSGTPWYQDVKTFVGAASVACLTVFTVFAAKEDDDPRLWGVFLGLGMLLIGAEFFLIAREHKLLCCKPRVDAASA 2973
LWH LGQD+TGSMAA PGTLPV LA LLD + L + QN WE PP+AIV GG+ AVR Y+EA++MGGTTAVTRPLKVVIVGKETVGKTSLRRSI TG PCMT+ GG ESTVHVDVEDH +DGHPIR+FDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEM+GLNLEDLAIAPWLR+LTFRVPDA++ILVGNK DRVV T R AVA DVE ESR+WL+SW+E A G+QP G+SLEDGVSLVSCA SG+G AP+FG +GWPCDKSTPGLFHR+IYD DD R VTM LP SYRLALEMLEELAS SR K EQ+TRGITRA LEEKW+AKVAE+N AGT VAAP+AAM+GAILIRKWEGGLVEYG+YVFLDVEWFATVLDPLF HKRDSYG IDLGGIRV ++ SL RLD EHV EPQLAE+LW P LAPHLLLALKSAGLTFPL ND NGGLVILLRMDTKPPP+Y I+ +E +QA K+DL L V CSF LGLPPGFVERLLARCCHLG PYPFWRYGALIVG GAEE +FSLSLEYSE +L VEV GG EV AWAALSKVLSV IKML EFPGLPC FFCP HKT GM I+ DA PGS LV ES FC LCQDR+A + L+A ALQVVEFSDE+FFDE LR++FA KVA QGCAS GSN + VSG A ISPS XXXXXXXXXXXXXXXX S TPWYQDVKTFVGAAS+ CL VF VF +EDDDPRLWGVFLGLGMLL+G EF LIARE+KLLC PR +AASA
Sbjct: 300 LWHALGQDETGSMAAGPGTLPVPLACLLDSLERIYRLSVAQNPWESPPDAIVVGGIPAVRAYFEAIYMGGTTAVTRPLKVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDHDLDGHPIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLAIAPWLRHLTFRVPDASVILVGNKCDRVVRTRRTAVAVDVEHESRQWLESWIEIARGHQPRGISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEELASCSRSKTEQQTRGITRAILEEKWQAKVAEMNRAGTSVAAPDAAMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKRDSYGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGPVLAPHLLLALKSAGLTFPLSNDSNGGLVILLRMDTKPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEERMFSLSLEYSEARKILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLHKTNGMKIRTKDARPGSCLVGESDFCKLCQDRSAAVGLVAVALQVVEFSDEKFFDEQLREQFAG---KVALQGCASWPGSNSE--VSGPAPVHISPS-----------XXXXXXXXXXXXXXXXXXXXXXGSRTPWYQDVKTFVGAASLVCLAVFGVFHDEEDDDPRLWGVFLGLGMLLVGVEFGLIAREYKLLCFTPRAEAASA 1081
BLAST of mRNA_Ecto-sp9_F_contig107.623.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE) HSP 1 Score: 937 bits (2422), Expect = 0.000e+0 Identity = 508/788 (64.47%), Postives = 567/788 (71.95%), Query Frame = 1
Query: 634 GTLPVELARLLDMFGGLSTLDLYQNSWEHPPEAIVAGGVQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANLILVGNKWDRVV-TARGAVADDVERESRRWLKSWMEKAYGYQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRANLEEKWKAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHKRDSYGNIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFP-LPNDPNGGLVILLRMDTKPPPEYSIRREEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEEGLFSLSLEYSEHDHMLKVEVLGGGDEVHAWAALSKVLSVMIKMLSEFPGLPCEPLFFCPQHKTKGMPIKKTDAPPGSGLVEESYFCPLCQ------DRTAGINLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVARQGCASQQGSNFKAGVSGSASSDISPSSRAPAPTRSXXXXXXXXXXXXXXXXXXSPTGQVVSGTPWYQDVKTFVGAASVACLTVFTVFAAKEDDDPRLWGVFLGLGMLLIGAEFFLIAREHKLLCCKPRVDAASA 2973
GTLPV L LLD + L L N WE+PPEAI AGG+ AVR Y+EA+ G+ETVGKTS++ TG PCMT+ GVESTVHVDVEDH+VDGHPIR+FDCAGQVVYYGLLQLFLTPRAVY+LVWDAAKASEM+GLNLEDL IAPWLRYLTFRVPDA++ILVGNK D VV T R VA DVE ESR+WL+S +E A G+QP G+SLEDGVSLVSCA SG+GV AP+FG G+GWP DK+TPGL+ R+ Y+ R VTMHLP SYRLAL+MLEELAS SR K EQ RG+TRA LE+KW+ KVAE+N GT V+AP+AAM+GAILIRKWEGGLVEY +YVFLDVEWFATVLDPLF HKRDSYG I LGG+RVT++ L RLD +HV EPQLAEE W FP LPND NGGLVILLRMDTKP P+Y I+ +EA+QA K+DL L V CSFSLGLPPGFVERLLARCCHLG PYPFWRYGALIVG GAE +FSLSLEYSE +L VEV GG EV AWAALSKVLSV IKMLSEFPGLPC FFCP HKTK M I+ D + + +F Q DR AGI+LLA ALQVVEFSDEEFFDE LR++FAE K+A +GCAS GS IS SR TPWYQDVKTFVGAASVACLTVF VF +EDDDP LWGVFLGLGMLL G EF LIARE+KLLC PR +AASA
Sbjct: 31 GTLPVPLVCLLDTLARVRDLGLAHNPWEYPPEAIAAGGIPAVRRYFEAIXXXXXXXXXXXXXXXXXGEETVGKTSIK----TGRPCMTRGCGVESTVHVDVEDHEVDGHPIRVFDCAGQVVYYGLLQLFLTPRAVYMLVWDAAKASEMEGLNLEDLGIAPWLRYLTFRVPDASVILVGNKCDHVVRTRRTVVAADVEHESRQWLESLIEIARGHQPRGISLEDGVSLVSCAASGVGVVAPSFGAGSGWPFDKNTPGLYRRIAYNSASRTRAVTMHLPESYRLALKMLEELASCSRSKTEQHIRGVTRAILEDKWQTKVAEMNRVGTSVSAPDAAMAGAILIRKWEGGLVEYSSYVFLDVEWFATVLDPLFCHKRDSYGKIYLGGMRVTDVDGLDRLDEDHVLEPQLAEEDWR-----------------FPSLPNDSNGGLVILLRMDTKPSPDYGIKLKEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEVRMFSLSLEYSEERKILTVEVSGGRTEVFAWAALSKVLSVTIKMLSEFPGLPCGTTFFCPLHKTKRMKIRTKDVSARACRSKYVFFVLRSQKFYLNKDRAAGIDLLAVALQVVEFSDEEFFDESLREQFAE---KMALRGCASWLGS-------------ISEGSR----------------------------------TPWYQDVKTFVGAASVACLTVFGVFHDEEDDDPLLWGVFLGLGMLLAGVEFGLIAREYKLLCFTPRAEAASA 747
BLAST of mRNA_Ecto-sp9_F_contig107.623.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE) HSP 1 Score: 922 bits (2383), Expect = 0.000e+0 Identity = 509/848 (60.02%), Postives = 578/848 (68.16%), Query Frame = 1
Query: 619 MAARPGTLPVELARLLDMFGGLST---LDLYQNSWEHPPEAIVAGGVQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCMTQDGGVESTVHVDVEDHKVD-------GHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANLILVGNKWDRVVTARGAVADDVERESRRWLKSWMEKAYGYQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPG---LFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRANLEEKWKAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHKRDSYGNIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRREEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEEGLFSLSLEYSEHDHMLKVEVLGGGDEVHAWAALSKVLSVMIKMLSEFPGLPCEPLFFCPQHKTKGMPI-KKTDAPPGSGLVEESYFCPLCQDRTAGINLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVARQGCASQQGSNFKAGVSGSASSDISPSS----RAPAPT------------------------------RSXXXXXXXXXXXXXXXXXXSPTGQVV------SGTP--------WYQDVKTFVGAASVACLTVFTVFAAKEDDDPRLWGVFLGLGMLLIGAEFFLIAREHKLLCCK-PRVDAASA 2973
M PGTLPV LA LLD F L + LDL QN WEHPPEAIV GG+ AVRGY+EA+F GGTT VTRPLKVVIVG ETVGKTSLR SI G PCMT+ GGV+STVHVDV+DH +D GHPIRIFDCAGQ YYGLLQLFLTPRAVYLLVWDA KAS+MD LNLEDLAIAPWLR +TFRVPDAN++LVGNKWD V A VADDVER+SR WL +W+E A+ +QP LSLE GVSLVSCA SG AP+FGG WPCDK+ PG LF R+IY+PVDD R VTM L P Y LAL +LEELAS SR V L AGT AA EAA+SGAILIRKWEGGLVEYGNY+FLDV WFA VLDPLFSHK+DS G I LGG VTN SL+RLD H+FEP+LAE+LW ELAPHLL AL SAGLTFP+PNDP GLV++LRMDT+PPP+Y EE + YDL L V CSF LGLPPGFVERLLARCCHLG+P+PFWRYGAL+VG GAEEG FSL+LEYSE D LKV+V G EVHAWA LSKVLSV IKMLSEFPGLPC+ F CP+H+ K M + K +A PGS LVEE FCP+C DRTAG +LL AAL VVE+SD EF D LR++FA+NA++VARQG A S + G S + +S P + R P T R SP S TP W +D++ VGAA C+TVF VF AKEDDDPRLWG+FLG+G++L EF L+A+ H+ C K PRV+AASA
Sbjct: 1 MLCVPGTLPVALASLLDSFDRLHSVGGLDLSQNPWEHPPEAIVTGGMLAVRGYFEAIFRGGTTVVTRPLKVVIVGMETVGKTSLRCSIKAGKPCMTRGGGVDSTVHVDVQDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELNLEDLAIAPWLRQMTFRVPDANVVLVGNKWDLVAEANLHVADDVERKSREWLTAWIESAHRHQPPQLSLEAGVSLVSCAPSGRAGWAPSFGGRKAWPCDKNKPGQPGLFRRIIYNPVDDMRAVTMRLSPVYVLALNLLEELASRSR----------------------VDALGTAGTTAAASEAALSGAILIRKWEGGLVEYGNYIFLDVGWFADVLDPLFSHKKDSNGIIYLGGKTVTNDDSLKRLDANHIFEPRLAEDLWGAELAPHLLSALNSAGLTFPIPNDPFEGLVVVLRMDTEPPPDYRTIVEEEQARKYYDLRLVVQCSFRLGLPPGFVERLLARCCHLGFPHPFWRYGALVVGAGAEEGKFSLTLEYSEEDKTLKVQVNGRCSEVHAWATLSKVLSVTIKMLSEFPGLPCQLEFLCPRHEDKSMRVLKANNARPGSRLVEEGNFCPVCPDRTAGNDLLGAALHVVEYSDTEFSDAQLRKRFADNAKRVARQGRALWPASVTEVGSSTTIASMYKPRAAQKCRIPMNTGPLSKPCGSTQPVCIETLGCSGLCELFFDRRRTQLFVQVSDPAPPQISPISPASLQTNPSSQDSRTPRYQDRMRAWVKDLRVQVGAAGALCVTVFGVFYAKEDDDPRLWGLFLGIGLVLAVVEFVLVAKLHERWCFKSPRVEAASA 826
BLAST of mRNA_Ecto-sp9_F_contig107.623.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW8_9PHAE) HSP 1 Score: 798 bits (2060), Expect = 2.570e-279 Identity = 403/490 (82.24%), Postives = 433/490 (88.37%), Query Frame = 1
Query: 1513 RRKAEQRTRGITRANLEEKWKAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHKRDSYGNIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRREEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEEGLFSLSLEYSEHDHMLKVEVLGGGDEVHAWAALSKVLSVMIKMLSEFPGLPCEPLFFCPQHKTKGMPIKKTDAPPGSGLVEESYFCPLCQDRTAGINLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVARQGCASQQGSNFKAGVSGSASSDISPSS--RAPAPTRSXXXXXXXXXXXXXXXXXXSPTGQVVSGTPWYQDVKTFVGAASVACLTVFTVFAAKEDDDPRLWGVFLGLGMLLIGAEFFLIAREHKLLCCKPRVDAASAV 2976
RRKA++RTRGITRA+LEEKW+AKVAEL+GAGTPVAAPEAA+SGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSH+RDSYG+IDLGGIRVTN+ASLRRLDNEHVFEPQLAEELW+ ELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTK PPEYSIRREEANQARKYDLTLTVAC FSLG+PPGFVERLLARCC LG PYPFWRYGAL+VGNGAEEGLFSLSL+YSEHD+MLKVEVLGGG EVHAWAALSKVLSVMIKMLSEFPGLPCEP+FFCPQHKTKGMP++ TDAP GSGLVEESYFCPLCQDR AGI+LLAAALQVV FSDEEFFDEPLR++FAENAE+V RQGCASQ GS+ + G ++P + A RS P VVSGTPWYQDVKTFVGAASVACLTVF VFA+KED+DPRLWGVFLG+GM L+G EF LIAREHKLLCCKPR DAASAV
Sbjct: 15 RRKAKRRTRGITRADLEEKWQAKVAELSGAGTPVAAPEAAISGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNIASLRRLDNEHVFEPQLAEELWSRELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKSPPEYSIRREEANQARKYDLTLTVACWFSLGVPPGFVERLLARCCRLGVPYPFWRYGALVVGNGAEEGLFSLSLDYSEHDNMLKVEVLGGGGEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPVRTTDAPAGSGLVEESYFCPLCQDRKAGIDLLAAALQVVGFSDEEFFDEPLRREFAENAERVTRQGCASQHGSDSEVGY-------LAPHAVGTMQAMNRSTQTGLPRSYEGLR------PRHDVVSGTPWYQDVKTFVGAASVACLTVFGVFASKEDEDPRLWGVFLGVGMTLLGVEFLLIAREHKLLCCKPREDAASAV 491
BLAST of mRNA_Ecto-sp9_F_contig107.623.1 vs.
Match: G (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA7_9PHAE) HSP 1 Score: 732 bits (1889), Expect = 4.230e-251 Identity = 421/715 (58.88%), Postives = 468/715 (65.45%), Query Frame = 1
Query: 733 IVAGGVQAVRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQ--------------------------------------------------------------------------------------VVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANLILVGNKWDRVVTARGAVADDVERESRRWLKSWMEKAYGYQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRANLEEKWKAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHKRDSYGNIDLGGIRVTNLASLR--RLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRREEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEEGLFSLSLEYSEHDHMLKVEVLGGGDEVHAWAALSKVLSVMIKMLSEFPGLPCEPLFFCPQHKTKGMPIKKTDAPPGSGLVEESYFCPLCQDRTAGINLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVARQGCASQQGSNFKAG 2613
I A +AVRGYYEAMFMGGTTAVT PLKVVIVGKETVGKTSLRRSITTG PCMT+D GVESTVHV+VEDHKVDG PIRIFDCAGQ VVYYGLLQ FLTPRAVYLLVWD AKASEM+GLNLEDLAIAP LR LTFRVPDAN++LVGNK DRV AR VADD+E ESR+WL +LVSC+ SGLG+ AP+FG T WPC KSTP LFHR+I++PVDDKR VTMH+PP Y++ALEMLEELASSSRRKAEQRTRGITRA+LE+KW+AKVAELN AGTPVAAPEAAMSGAILI SHKRD G+IDLGGIRV N A R RLD +HVFEP+LAE LW+PELA HLLLALKSAGLTFPLP D NGGLVI LRMDT PEY I+ E+ ++A + DL LTV CSFSLGLP GFVER LA+CCH+GYPYPFWRYGALIV +G D +L +EV GG +EVHAWAALSKVLSV+IKML T +P PGS LVEESY C LCQDR AGI+LLAAALQV+EFSDE+FFDEPLR++FAENA+KVAR+ CA G N++ G
Sbjct: 9 IEAASREAVRGYYEAMFMGGTTAVTPPLKVVIVGKETVGKTSLRRSITTGKPCMTRDSGVESTVHVNVEDHKVDGRPIRIFDCAGQAVKTWLSVEDDPEVLEEEIAMELQAVDEQLAGVTLDDDVPSEEEDDDGMYPVILHPVAQFTLFDTMFQSSAPLQVSVLPHVDHCRQVVYYGLLQQFLTPRAVYLLVWDTAKASEMNGLNLEDLAIAPRLRCLTFRVPDANMVLVGNKLDRVAKARRTVADDLESESRQWL---------------------NLVSCSPSGLGILAPSFGARTDWPCGKSTPELFHRIIFNPVDDKRAVTMHIPPGYQVALEMLEELASSSRRKAEQRTRGITRADLEQKWQAKVAELNSAGTPVAAPEAAMSGAILI-----------------------------SHKRDLDGHIDLGGIRVPNDARARLDRLDRDHVFEPKLAEGLWSPELASHLLLALKSAGLTFPLPQDSNGGLVINLRMDTTRLPEYGIKLEQVHKASEPDLKLTVKCSFSLGLPLGFVERFLAQCCHVGYPYPFWRYGALIVDDG---------------DKILALEVFGGCEEVHAWAALSKVLSVVIKML------------------TSSLPR------PGSCLVEESYICQLCQDRAAGIDLLAAALQVLEFSDEKFFDEPLREQFAENAKKVARKDCALWPGMNYEVG 634
BLAST of mRNA_Ecto-sp9_F_contig107.623.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED3_9PHAE) HSP 1 Score: 476 bits (1225), Expect = 2.590e-155 Identity = 251/426 (58.92%), Postives = 295/426 (69.25%), Query Frame = 1
Query: 1645 ILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHKRDSYGNIDLGGIRVT-NLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRREEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEEGLFSLSLEYSEHDHMLKVEVLGGGDEVHAWAALSKVLSVMIKMLSEFPGLPCEPLFFCPQHKTKGMPIKKTDAPPGSGLVEESYFCPLCQDRTAGINLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVARQGCASQQGSNFKAGVSGSASSDISPSSRAPAPTRSXXXXXXXXXXXXXXXXXXSPTGQVVSGTPWYQDVKTFVGAASVACLTVFTVFAAKEDDDPRLWGVFLGLGMLLIGAEFFLI 2919
I++ KWEGGLVEYG+YVFLDV+WFA VLDPLFSHKR+ YG+IDLGG VT N+ SLRRLDN+H+FEP+LAEELW P+LA HLL ALKSAGLTFP+PNDPN GLVIL+RM KPPP Y + ++A ARKYDL L C F LGLPPG +ER+LARCC LG+PYPFWRYGALI G G + G FS L YS+ + +L++ V GG ++V AWA LSKVLSV+IKMLSE+ GLPCEP FCP H+ K MPI + + PGS LVEES FCPLC DR AGI+ LAAALQVVEFSD F DE L ++FAENA KVA + C SN++ S T V WY+DVK ++ AS ACLTVFT F AK+DDDPRLWG FL +GMLLI + LI
Sbjct: 2 IVVEKWEGGLVEYGSYVFLDVQWFAEVLDPLFSHKRNLYGSIDLGGRSVTKNVRSLRRLDNDHIFEPRLAEELWGPDLARHLLAALKSAGLTFPMPNDPNEGLVILVRMKDKPPPGYDTKLKQAIAARKYDLKLIFHCKFRLGLPPGLIERILARCCQLGHPYPFWRYGALISGEGGQ-GSFSADLRYSDENKLLEIVVHGGREKVDAWATLSKVLSVLIKMLSEYGGLPCEPQLFCPLHEEKSMPITR-NTKPGSRLVEESDFCPLCLDRRAGISFLAAALQVVEFSDTCFLDEQLSKEFAENATKVAHKICEPWLSSNYQ----------------------------------------NSETRYV-----WYEDVKAWILLASEACLTVFTAFVAKDDDDPRLWGSFLAVGMLLILIDAVLI 380
BLAST of mRNA_Ecto-sp9_F_contig107.623.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM75_ECTSI) HSP 1 Score: 440 bits (1132), Expect = 5.130e-133 Identity = 282/680 (41.47%), Postives = 370/680 (54.41%), Query Frame = 1
Query: 580 GLWHTLGQDQTGSMAARPGTLPVELA--RLLDMFGGLSTLDLYQNSWEHPPEAIVAGGVQA-VRGYYEAMFMGGTTAVTRPLKVVIVGKETVGKTSLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWD--AAKASEMDGLN--LEDLAIAPWLRYLTFRVPDANLILVGNKWDRVVTARGAVADD--------VERESRRWLKSWM-EKAYGYQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDK-RTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRANLEEKWKAKVAELNGAGTPVAAPEAAMSGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHKRDSYGNIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEYSIRREEANQARKYDLTLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEEGLFSLSLEYSEHDHML----KVEVLGGGDEVHAWAALSKVLSVMIKMLSEFPGLPCEPLFFCPQHK--TKGMPIKKTDAPPGSGLVEESYFCPLC--QDRTAGINLLAAALQVVEFSDEEFFDEPLRQKF 2544
GLW + + G PV A LL + G S + N W +PP ++ + VR Y+ A+ G + V RPLKVV+VGKE+VGKTSLR+SI G T++ G ESTVH+DVEDH++DG PIRIFDCAGQV Y GLLQLFLTP+ ++LLV D + + +G + LEDL W+R L+FRVP A +ILVG K DRV G + VE R W+ W ++ + + ++ E+GVSLV+C G+ GG WPCD S P L HR+ + D K R V LP S+ AL +L+E A R + RG+ R L+ W KV EL G + A E A+ GAI I +EG LV YG++V +DV+W ATVL PL SHK S G ++LGGI V + RL + + EP+LAEELW P+ HLL AL SAGLTFP PND GGLV+LLR+D P + ++ + +D + +C+ G PPGF+ERLL+ CC LG FWRYG LI FS+ LEY+E D L V+ G W ALS LSV+ KMLSEFPG+ E CP H ++ +PI P + E C C + +L + L VV +D F +KF
Sbjct: 287 GLWEVERKSRQGRTTPLSAKEPVPSALDSLLRVVEGCSQVRWGNNPWRYPPAEVMGQSISVHVRQYFNAVLAGSVSTVRRPLKVVVVGKESVGKTSLRQSIVAGKARPTRNHGGESTVHIDVEDHELDGRPIRIFDCAGQVAYTGLLQLFLTPQVIHLLVVDMPSVVGNIENGTSNPLEDLGALRWVRSLSFRVPGAAVILVGTKCDRVKDTDGETTEARLSRAAGMVEDNIRSWIHKWTTQRLHNHHAQSIAFENGVSLVNC-----GLPCDELDGG--WPCDVSQPSLLHRITFK--DGKARGVDADLPLSWGCALSLLDETARRVR--GQPGFRGVERTELDGLWHDKVDELKRGGHEMEATEHALDGAISIMAYEGSLVVYGSFVIVDVQWLATVLKPLCSHKDMSMGEVNLGGITVRPGPRVERLVKDGILEPKLAEELW-PDTWEHLLRALSSAGLTFPRPNDKEGGLVVLLRLDKDRPDDVGDILDDFRAS--HDGQIVASCTLLQGAPPGFIERLLSTCCRLGSCNHFWRYGVLIQSRS-----FSVILEYAEDDDTLVGKFSVDAFGDSRTAGPWLALSGCLSVLSKMLSEFPGMDVEATLECPYHSGGSRLIPIDLYQRRPWQCFIREVDGCRRCIHEGEQNARHLFSRGLVVVPVTDSGFDTAGFTRKF 947
BLAST of mRNA_Ecto-sp9_F_contig107.623.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM38_9PHAE) HSP 1 Score: 411 bits (1057), Expect = 6.670e-133 Identity = 203/238 (85.29%), Postives = 213/238 (89.50%), Query Frame = 1
Query: 856 SLRRSITTGGPCMTQDGGVESTVHVDVEDHKVDGHPIRIFDCAGQ------------------VVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANLILVGNKWDRVVTARGAVADDVERESRRWLKSWMEKAYGYQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSR 1515
SLRRSITTG PCMTQDGG+ESTVHVDVEDHKVDGHPIRIFDCAGQ +VYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDAN+ILVGNKWDRVV AR VADDVERESRR+LKSWMEKA+G+QPH LSLE+GVSLV+CAQS LGVSAPAFGGGTGWPCDKSTPGLFHRMIY+PVDDKRTVTMHLPPSY +ALEMLEELASSSR
Sbjct: 5 SLRRSITTGKPCMTQDGGLESTVHVDVEDHKVDGHPIRIFDCAGQSYAPLDVSVIPHVDHCRQIVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVVRARCTVADDVERESRRFLKSWMEKAHGHQPHRLSLENGVSLVTCAQSDLGVSAPAFGGGTGWPCDKSTPGLFHRMIYNPVDDKRTVTMHLPPSYHVALEMLEELASSSR 242 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig107.623.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig107.623.1 >prot_Ecto-sp9_F_contig107.623.1 ID=prot_Ecto-sp9_F_contig107.623.1|Name=mRNA_Ecto-sp9_F_contig107.623.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=832bp MLFQNKLTGSIPPELGNLKKLKELSLFKNELIGLWHTLGQDQTGSMAARPback to top mRNA from alignment at Ecto-sp9_F_contig107:47705..56737- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig107.623.1 ID=mRNA_Ecto-sp9_F_contig107.623.1|Name=mRNA_Ecto-sp9_F_contig107.623.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=9033bp|location=Sequence derived from alignment at Ecto-sp9_F_contig107:47705..56737- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig107:47705..56737- >mRNA_Ecto-sp9_F_contig107.623.1 ID=mRNA_Ecto-sp9_F_contig107.623.1|Name=mRNA_Ecto-sp9_F_contig107.623.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=4992bp|location=Sequence derived from alignment at Ecto-sp9_F_contig107:47705..56737- (Ectocarpus species9 EcSCA_722f female)back to top |