prot_Ecto-sp9_F_contig9988.18050.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9988.18050.1
Unique Nameprot_Ecto-sp9_F_contig9988.18050.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length215
Homology
BLAST of mRNA_Ecto-sp9_F_contig9988.18050.1 vs.
Match: Putative (ATP-dependent helicase YFR038W n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDG7_ECTSI)

HSP 1 Score: 439 bits (1130), Expect = 8.740e-147
Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 0
Query:    1 LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNSNPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQV 215
            LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDL GRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNSNPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQ 
Sbjct:  470 LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLAGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNSNPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQA 684          
BLAST of mRNA_Ecto-sp9_F_contig9988.18050.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB1_9PHAE)

HSP 1 Score: 437 bits (1124), Expect = 8.690e-146
Identity = 212/215 (98.60%), Postives = 213/215 (99.07%), Query Frame = 0
Query:    1 LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNSNPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQV 215
            LHEILRPFLIRR+KKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQ QIEEFNSNPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQ 
Sbjct:  522 LHEILRPFLIRRIKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQSQIEEFNSNPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQA 736          
BLAST of mRNA_Ecto-sp9_F_contig9988.18050.1 vs.
Match: SNF2 (family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K9_9STRA)

HSP 1 Score: 306 bits (784), Expect = 3.300e-98
Identity = 150/218 (68.81%), Postives = 179/218 (82.11%), Query Frame = 0
Query:    1 LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNS---NPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQV 215
            LHEILRPFL+RR+K+DVL N+ +PPKREV+VYAGMT  QR YY LV    LR  L ++GIEGAA +S+IN NMNQRKVCQHP+LFGEP+DK TGEYVG+ NPE LV ASGK+AL+DR+LK+L   GHKVL+FSQMTS+L +LEDYLRHR W + RIDG++ ++DRQ  I+ FN+   N   FVFLLSTRAGGLGINL AADT ++FDSDWNPHQDSQ 
Sbjct:  244 LHEILRPFLLRRLKRDVLQNE-MPPKREVLVYAGMTRLQRTYYSLVEAGTLRDTLCELGIEGAADISQINSNMNQRKVCQHPYLFGEPRDK-TGEYVGVSNPETLVAASGKLALLDRLLKRLKQQGHKVLLFSQMTSMLTILEDYLRHRDWGYCRIDGTSALIDRQASIDAFNNGETNDDLFVFLLSTRAGGLGINLTAADTVVIFDSDWNPHQDSQA 459          
BLAST of mRNA_Ecto-sp9_F_contig9988.18050.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBT7_9STRA)

HSP 1 Score: 287 bits (735), Expect = 9.310e-90
Identity = 142/218 (65.14%), Postives = 173/218 (79.36%), Query Frame = 0
Query:    1 LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNSNPK---FFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQV 215
            LHEILRPFL+RR+K+DVL  + +PPK E+VVYAGMT  QR YY LV    LR+ L+++GIEGAA +S+INI+MN RKVCQHP+LFGEP+DK +GEYVG  NPE LV ASGK+AL+DR+L KL   GHKVL+FSQMTS+L +LEDY+RHR W + RIDGS+ +  RQ  I+ FN+        +FLLSTRAGGLGINL AADT IL+DSDWNPHQD+Q 
Sbjct:  347 LHEILRPFLLRRLKRDVLQVE-IPPKCEIVVYAGMTRLQRTYYSLVETGTLRETLLELGIEGAAEISQINISMNLRKVCQHPYLFGEPRDK-SGEYVGTTNPETLVAASGKLALLDRLLTKLRKQGHKVLVFSQMTSMLSILEDYVRHRRWGYCRIDGSSPLAGRQASIDAFNAGAMEEDLVIFLLSTRAGGLGINLAAADTVILYDSDWNPHQDTQA 562          
BLAST of mRNA_Ecto-sp9_F_contig9988.18050.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QEQ7_9STRA)

HSP 1 Score: 284 bits (727), Expect = 5.400e-88
Identity = 138/215 (64.19%), Postives = 168/215 (78.14%), Query Frame = 0
Query:    1 LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNSNPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQV 215
            LHEILRPFL+RR+K++VL +  +PPK+E+VVYA M+  QR +Y LV + +LR  L   GIEGA  +S+IN  MN RKVC HPFLFGEPK    G Y+G  NPE LV A GK+ L+D++ KKL AGGHKVL+FSQMT +L ++EDYLR+RGW + RIDGS +V DRQ  IE FNS+P  F+FLLSTRAGGLGINL AADTCI++DSDWNPHQDSQ 
Sbjct:  444 LHEILRPFLLRRLKQNVLVD--MPPKKELVVYAPMSQLQRDFYALVQKGSLRDVLTTWGIEGAKGISQINDCMNLRKVCNHPFLFGEPKTN-EGVYLGEANPETLVSACGKMVLLDKLCKKLKAGGHKVLLFSQMTGVLSIIEDYLRNRGWRYCRIDGSVNVFDRQEMIESFNSDPDVFIFLLSTRAGGLGINLAAADTCIIYDSDWNPHQDSQA 655          
BLAST of mRNA_Ecto-sp9_F_contig9988.18050.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BX46_9STRA)

HSP 1 Score: 271 bits (693), Expect = 2.920e-86
Identity = 135/228 (59.21%), Postives = 171/228 (75.00%), Query Frame = 0
Query:    1 LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFN-------------SNPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQV 215
            LHEILRPFL+RR+K+DVL +  LPPK+EVV+Y+GM+  Q GY DL+ +  +RQ LM+ GI GA++LS+ N  MN RK   HPFLFGEP D ++G ++G  +P++LVRASGK AL+DRML  L    H+VLIFSQMT +L+V+EDYL  R W++ RIDGST + DRQ+Q++ FN             S+ + FVFLLSTRAGGLGINL AADTCI+FDSDWNPHQDSQ 
Sbjct:  103 LHEILRPFLLRRIKRDVLTD--LPPKKEVVIYSGMSKLQSGYADLIEKGTIRQILMNQGISGASKLSQTNKQMNHRKNSNHPFLFGEPIDSVSGLHLGTAHPQLLVRASGKFALLDRMLTSLWEDKHQVLIFSQMTGVLNVMEDYLMWRRWKYCRIDGSTKIDDRQKQMDVFNAEKTSGADGGRNESDERMFVFLLSTRAGGLGINLTAADTCIIFDSDWNPHQDSQA 328          
BLAST of mRNA_Ecto-sp9_F_contig9988.18050.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IJD8_9STRA)

HSP 1 Score: 268 bits (684), Expect = 5.820e-84
Identity = 132/228 (57.89%), Postives = 170/228 (74.56%), Query Frame = 0
Query:    1 LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNS-------------NPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQV 215
            LH+ILRPFL+RR+KKDVL +  +PPK+EVVVYAGM+  Q GY D++ +  LR  L+  GI+ A +LS+ N  MN RK   HPF+FGEP D+ TG ++G  +PE+L+RASGK AL+DRML +LH   H+VLIFSQMTSLL+V+EDYL +R W + RIDG+T + +RQ+Q++ FN+             + + FVFLLSTRAGGLGINL  ADTCI+FDSDWNPHQDSQ 
Sbjct:  186 LHDILRPFLLRRIKKDVLTD--MPPKKEVVVYAGMSKLQIGYADMIEQGVLRDVLLGQGIQQARQLSQTNKQMNHRKNANHPFMFGEPIDQATGVHLGTSHPELLIRASGKFALLDRMLVRLHRDKHQVLIFSQMTSLLNVIEDYLLYRRWGYCRIDGTTKIDERQKQMDVFNAEKTAGEDGTRNDADDRHFVFLLSTRAGGLGINLATADTCIIFDSDWNPHQDSQA 411          
BLAST of mRNA_Ecto-sp9_F_contig9988.18050.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCT4_THAPS)

HSP 1 Score: 265 bits (678), Expect = 1.100e-83
Identity = 132/228 (57.89%), Postives = 168/228 (73.68%), Query Frame = 0
Query:    1 LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNS-------------NPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQV 215
            LH+ILRPFL+RR+K DVL +  +PPK+EVVVYAGM+  Q GY  ++ +  LR  L++ GIE A  LS+ N  MN RK C HPF+FGEP D  +G ++G  +P++L+RASGK AL+DRML++L    H+VLIFSQMTSLL+V+EDYL  R W++ RIDGST + +RQRQ++ FNS             + + FVFLLSTRAGGLGINL  ADTCI+FDSDWNPHQDSQ 
Sbjct:  233 LHDILRPFLLRRIKMDVLTD--MPPKKEVVVYAGMSKLQAGYAQMIEQGVLRDMLLNQGIEQARTLSQTNKQMNHRKNCNHPFMFGEPIDPASGAHMGSAHPQLLIRASGKFALLDRMLERLFKDKHQVLIFSQMTSLLNVIEDYLLFRQWKYCRIDGSTKIDERQRQMDVFNSEKTAGKGGTRNDGDDRHFVFLLSTRAGGLGINLATADTCIIFDSDWNPHQDSQA 458          
BLAST of mRNA_Ecto-sp9_F_contig9988.18050.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNW5_9STRA)

HSP 1 Score: 264 bits (675), Expect = 2.940e-83
Identity = 130/228 (57.02%), Postives = 168/228 (73.68%), Query Frame = 0
Query:    1 LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNS-------------NPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQV 215
            LH ILRPFL+RR+KKDVL +  +PPK+EVVVYAG++  Q+GY  ++ ++ LR  L+  GIE    LS+ N  MN RK   HPFLFGEPKD  +G  +G  +P++LV+ASGK AL+DRML +LH   H+VLIFSQMTS+L+V+EDYLR R W + RIDGST++ DRQ+Q+++FN+             + + F FLLSTRAGGLGINL +ADTCI+FDSDWNPH DSQ 
Sbjct:  124 LHSILRPFLLRRVKKDVLKD--MPPKKEVVVYAGISKLQQGYAAMIEQSTLRDTLLQQGIEEGRFLSQTNKQMNHRKNINHPFLFGEPKDPASGHPIGTAHPQLLVKASGKFALLDRMLDRLHRDKHQVLIFSQMTSVLNVMEDYLRFRDWRYFRIDGSTNIDDRQKQMDQFNAEKTSGVDGKRNQADDRHFCFLLSTRAGGLGINLTSADTCIIFDSDWNPHADSQA 349          
BLAST of mRNA_Ecto-sp9_F_contig9988.18050.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAL6_TRICV)

HSP 1 Score: 270 bits (690), Expect = 4.070e-83
Identity = 137/228 (60.09%), Postives = 166/228 (72.81%), Query Frame = 0
Query:    1 LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNALRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIKNPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRGWEFHRIDGSTDVLDRQRQIEEFNS-------------NPKFFVFLLSTRAGGLGINLCAADTCILFDSDWNPHQDSQV 215
            LHEILRPFL+RR+KK VL +  LPPK+EVVVYAGM+  Q GY  ++ +  LR  L+  GIE A  LS+ N  MNQRK   HPF+FGEP D  TG ++G  +P +LVRASGK AL+DRML +LH   H+VLIFSQMT+LL+V+EDYL  R W++ RIDGST + DRQRQ++ FNS             + + FVFLLSTRAGGLGINL  ADTCI+FDSDWNPHQDSQ 
Sbjct:  362 LHEILRPFLLRRIKKQVLTD--LPPKKEVVVYAGMSKLQLGYSSMIEKGVLRDVLLGQGIEQARTLSQTNKQMNQRKNANHPFMFGEPIDPATGVHLGTAHPHLLVRASGKFALLDRMLDRLHKDKHQVLIFSQMTALLNVIEDYLIFRNWKYCRIDGSTKIDDRQRQMDVFNSEKTAGENGTRNDSDDRHFVFLLSTRAGGLGINLATADTCIIFDSDWNPHQDSQA 587          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9988.18050.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Putative8.740e-14799.07ATP-dependent helicase YFR038W n=1 Tax=Ectocarpus ... [more]
Uncharacterized8.690e-14698.60protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
SNF23.300e-9868.81family N-terminal domain-containing protein n=1 Ta... [more]
P-loop9.310e-9065.14containing nucleoside triphosphate hydrolase prote... [more]
Hypothetical5.400e-8864.19protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical2.920e-8659.21protein n=1 Tax=Proboscia inermis TaxID=420281 Rep... [more]
Hypothetical5.820e-8457.89protein n=1 Tax=Odontella aurita TaxID=265563 RepI... [more]
Uncharacterized1.100e-8357.89protein (Fragment) n=1 Tax=Thalassiosira pseudonan... [more]
Hypothetical2.940e-8357.02protein n=1 Tax=Amphiprora paludosa TaxID=265537 R... [more]
Hypothetical4.070e-8360.09protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 140..215
e-value: 2.2E-9
score: 47.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 113..214
e-value: 1.8E-14
score: 54.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 114..215
score: 13.84
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..23
e-value: 7.8E-70
score: 237.6
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 1..84
e-value: 6.3E-7
score: 28.4
NoneNo IPR availableGENE3D3.40.50.300coord: 24..214
e-value: 7.8E-70
score: 237.6
NoneNo IPR availablePANTHERPTHR45623FAMILY NOT NAMEDcoord: 1..214
NoneNo IPR availablePANTHERPTHR45623:SF17CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATEDcoord: 1..214
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9988contigEcto-sp9_F_contig9988:552..3178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9988.18050.1mRNA_Ecto-sp9_F_contig9988.18050.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9988 550..3178 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9988.18050.1 ID=prot_Ecto-sp9_F_contig9988.18050.1|Name=mRNA_Ecto-sp9_F_contig9988.18050.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=215bp
LHEILRPFLIRRMKKDVLANDGLPPKREVVVYAGMTSWQRGYYDLVGRNA
LRQALMDMGIEGAARLSEININMNQRKVCQHPFLFGEPKDKMTGEYVGIK
NPEILVRASGKVALMDRMLKKLHAGGHKVLIFSQMTSLLDVLEDYLRHRG
WEFHRIDGSTDVLDRQRQIEEFNSNPKFFVFLLSTRAGGLGINLCAADTC
ILFDSDWNPHQDSQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR027417P-loop_NTPase