prot_Ecto-sp9_F_contig9981.18047.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9981.18047.1
Unique Name	prot_Ecto-sp9_F_contig9981.18047.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	196

Homology

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BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.
Match: Ammonium (transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G436_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 1.440e-128
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 0

Query:    1 ESPFAATPGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPARENPLFGCAGVIDFAGSGIVHMFGGAIGLFISRKVKSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA 196
            ESPFAAT GNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPARE PLFGC GVIDFAGSGIVHMFGGAIGLF+SRKV+SRGGRFFP KHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA
Sbjct:   95 ESPFAATSGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPAREYPLFGC-GVIDFAGSGIVHMFGGAIGLFVSRKVRSRGGRFFPAKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA 289

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BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.
Match: Ammonium_transp (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L500_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 1.780e-119
Identity = 179/195 (91.79%), Postives = 181/195 (92.82%), Query Frame = 0

Query:    2 SPFAATPGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPARENPLFGCAGVIDFAGSGIVHMFGGAIGLFISRKVKSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA 196
            SPFAAT GNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVW DDGWASPARENPLFGC GVIDFAGSGIVHM GGAIGLFIS+KV+SR GRFFPPKHWDG      LKNHTDQPQLNEAGFRSND  WMTLGTFLLWLGWYGFNCGSVSEISTT SQNAAGRAALNTSIGA
Sbjct:   72 SPFAATSGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWADDGWASPARENPLFGC-GVIDFAGSGIVHMLGGAIGLFISKKVRSRPGRFFPPKHWDG-----TLKNHTDQPQLNEAGFRSNDATWMTLGTFLLWLGWYGFNCGSVSEISTTESQNAAGRAALNTSIGA 260

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BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.
Match: Ammonium (transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL37_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 1.410e-49
Identity = 104/200 (52.00%), Postives = 123/200 (61.50%), Query Frame = 0

Query:    3 PFAATPGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASP-----ARENPLFGCAGVIDFAGSGIVHMFGGAIGLFISRKVKSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSN-DPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA 196
            PF AT       + L+CLF+WSFAATCTT+VSGAVADRI VKAY VYAFLTSA+FYPLLAHAVW D+GWASP          L  C G +DFAGSG+VHM GG IGL +S  V++R  RF                     P+L E    +  D     +   LL    YGFNCGS  +IS+  ++NAAGRAALNT+IGA
Sbjct:   95 PFEATDDRDVGTALLECLFRWSFAATCTTIVSGAVADRIYVKAYFVYAFLTSAVFYPLLAHAVWADEGWASPFLTSEGESAALLNC-GFVDFAGSGVVHMLGGGIGLVLSIMVENRSDRFIDA-----------------DPELVEKNTSATLDRRLFKVSHNLLPRDRYGFNCGSTLQISSEETRNAAGRAALNTTIGA 276

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BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF7_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 3.570e-38
Identity = 93/199 (46.73%), Postives = 111/199 (55.78%), Query Frame = 0

Query:    3 PFAATPGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASP----ARENPLFGCAGVIDFAGSGIVHMFGGAIGLFISRKVKSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSN-DPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA 196
            PF AT       + L+CLF+WSFAATCTT+VS A              FLTSA+FYPLLAHA W D+GWASP      E+  +   GV+DFAGSG+VHM GG IGL +S  V +R  RF                     PQL E    +  D     +   LL  G YGFNCGS  +IST  ++NAAGRAALNT+IGA
Sbjct:  109 PFEATDDRDVGTALLECLFRWSFAATCTTIVSDA--------------FLTSAVFYPLLAHAAWADEGWASPFLTSEGESAAWLNCGVVDFAGSGVVHMLGGGIGLVLSMVVDNRSDRFIDAN-----------------PQLVERNKSATLDRRLFKVSHNLLSRGRYGFNCGSTLQISTEETRNAAGRAALNTTIGA 276

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BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.
Match: Hypothetical (protein n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B0U9_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.110e-33
Identity = 74/179 (41.34%), Postives = 107/179 (59.78%), Query Frame = 0

Query:   20 LFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPARENPLFGCAGVIDFAGSGIVHMFGGAIGLFISRKVKSRGGRFFPPKHWDGGAN--GSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA 196
            L+Q++FAAT  T+V+G +A+R  + AYL+Y+   +A  YP++ HAVW+ +G+ +P   NPLFG  G+IDFAGSG+VH+ GG   L  S+ +  R GRF   K   G       K++ H+   Q               LGTF+LW GWYGFN GS+ ++ST      A  AA++T++GA
Sbjct:   65 LYQFTFAATAATIVAGTLAERCQMVAYLLYSTFLTAFVYPVIVHAVWSANGFLTPLTTNPLFG-VGMIDFAGSGVVHVTGGFTSLIASKILGPRKGRFDERKSQTGSTLEVAKKIEGHSSSLQA--------------LGTFILWFGWYGFNAGSIHQVSTENYAMIASLAAVSTTLGA 228

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BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.
Match: Ammonium (transporter n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166H2D8_DAUCS)

HSP 1 Score: 130 bits (327), Expect = 3.590e-32
Identity = 76/182 (41.76%), Postives = 104/182 (57.14%), Query Frame = 0

Query:   20 LFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPARENPLFGCAGVIDFAGSGIVHMFGGAIGLFISRKVKSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTT-------GSQNAAGRAALNTSI 194
            L+QW+FA     + SG++A+R    AYL+Y+   + L YP+++H  W+ DGWASPARE+ LFG +GV DFAGSG+VHM GG  GL+ +     R GRF      D       L+ H+               + + LGTFLLW GWYGFN GS ++IST        G  +A GR A+ T++
Sbjct:  136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPVVSHWFWSPDGWASPAREDLLFG-SGVFDFAGSGVVHMVGGIAGLYGALIEGPRIGRF------DQSGRAIALRGHS--------------ASLVVLGTFLLWFGWYGFNPGSFNKISTVYVSGSYYGQWSAVGRTAVTTTL 296

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BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.
Match: Ammonium (transporter n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2N6E7_9CHLO)

HSP 1 Score: 130 bits (328), Expect = 4.490e-32
Identity = 77/176 (43.75%), Postives = 99/176 (56.25%), Query Frame = 0

Query:   21 FQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPARENPLFGCAGVIDFAGSGIVHMFGGAIGLFISRKVKSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA 196
            F W+F+A  TT+VSGAVA+RI    Y++Y+   S+L YP++AH +WT  GW SP    PLFG +G IDFAG  +VH  GGA  L        R GRF        G +GS  +           G+R N+   + LGTFLLW GWYGFN GS   +ST  +     R A+ T+IGA
Sbjct:  208 FHWAFSAAATTIVSGAVAERISFGTYMLYSCFMSSLVYPVVAHWLWTQWGWLSPLAAAPLFG-SGAIDFAGGVVVHTVGGAASLIGVYFCGPRVGRF--------GIDGSPCR-----------GYRENNSNLIVLGTFLLWFGWYGFNPGSALAVSTYSTAALVARTAVTTTIGA 363

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BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.
Match: Ammonium (transporter n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E6Q1_TRICV)

HSP 1 Score: 130 bits (327), Expect = 5.030e-32
Identity = 73/181 (40.33%), Postives = 107/181 (59.12%), Query Frame = 0

Query:   16 FLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPARENPLFGCAGVIDFAGSGIVHMFGGAIGLFISRKVKSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA 196
            F+  LFQ++FAAT  T+V+G +A+R  + AYL Y+   +   YP++ H+VW+ +G+ S   ++PLFG +G+IDFAGSG+VH+ GG   L  ++ + SR GRFF  +       G+KL++    P         +  A   LG+F+LW GWYGFN GS   I T      A  AA NT++ A
Sbjct:  132 FVFWLFQFAFAATSATIVAGTLAERCQMTAYLCYSVALTGFVYPVICHSVWSYNGFLSATAKDPLFG-SGMIDFAGSGVVHLTGGTTALIATKILGSRKGRFFDER-------GNKLRHPKPFP--------GHSVALQVLGSFILWFGWYGFNTGSARSIVTAAQSKIAALAATNTTLAA 296

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BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.
Match: Ammonium (transporter n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G8J5_9EUGL)

HSP 1 Score: 130 bits (326), Expect = 7.140e-32
Identity = 71/183 (38.80%), Postives = 104/183 (56.83%), Query Frame = 0

Query:   16 FLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPARENPL--FGCAGVIDFAGSGIVHMFGGAIGLFISRKVKSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA 196
            ++   FQW+F A   T+VSGAVA+RI V +Y +++FL S + YP++ H +W+  GW S    +P+   G  G++DFAGSG+VH+ GG   L  +  +  R GR+ P               H D+ +  E  FR ++ A   LGT +LW GWYGFNCGS    S+ G+   A R A+ T++ A
Sbjct:  120 YVSWFFQWTFTAAAATIVSGAVAERITVLSYTIFSFLMSTVIYPVVVHWIWSVHGWLSAFNASPVGRLGTNGMLDFAGSGVVHLTGGMASLVGAAILGPRKGRYGPKGE------------HLDEKKAREEIFRPHNRALCCLGTLVLWFGWYGFNCGSTLAASS-GASYIAARVAVTTTLSA 289

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BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.
Match: Ammonium (transporter (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MFM6_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.110e-31
Identity = 71/177 (40.11%), Postives = 101/177 (57.06%), Query Frame = 0

Query:   20 LFQWSFAATCTTVVSGAVADRIPVKAYLVYAFLTSALFYPLLAHAVWTDDGWASPARENPLFGCAGVIDFAGSGIVHMFGGAIGLFISRKVKSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA 196
            LFQ++FAAT  T+V+G +A+R  + AYL Y+   +   YP++ HAVW+D G+ SP   NPL+G +GVIDFAGS +VH  GG   +  ++ +  R GRFF  +                +P       + +  A   LGTF+LW GWYGFN GS  +IS+      A  AA+NT++ A
Sbjct:  136 LFQFAFAATAATIVAGTLAERCQMAAYLCYSIALTGFVYPVIVHAVWSDAGFLSPTNANPLWG-SGVIDFAGSAVVHTTGGVTAIIATKILGPRKGRFFDAR---------------GKPVERPKKIQGHSMALQMLGTFILWFGWYGFNAGSAVKISSAIQGRIASLAAVNTTLAA 296

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9981.18047.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Ammonium	1.440e-128	96.94	transporter n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
Ammonium_transp	1.780e-119	91.79	domain-containing protein n=1 Tax=Ectocarpus sp. C...	[more]
Ammonium	1.410e-49	52.00	transporter n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
Uncharacterized	3.570e-38	46.73	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Hypothetical	2.110e-33	41.34	protein n=2 Tax=Minutocellus polymorphus TaxID=265...	[more]
Ammonium	3.590e-32	41.76	transporter n=1 Tax=Daucus carota subsp. sativus T...	[more]
Ammonium	4.490e-32	43.75	transporter n=1 Tax=Monoraphidium neglectum TaxID=...	[more]
Ammonium	5.030e-32	40.33	transporter n=1 Tax=Trieres chinensis TaxID=151414...	[more]
Ammonium	7.140e-32	38.80	transporter n=2 Tax=Eutreptiella gymnastica TaxID=...	[more]
Ammonium	1.110e-31	40.11	transporter (Fragment) n=1 Tax=Odontella aurita Ta...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024041	Ammonium transporter AmtB-like domain	PFAM	PF00909	Ammonium_transp	coord: 10..193 e-value: 6.6E-32 score: 110.7
IPR029020	Ammonium/urea transporter	GENE3D	1.10.3430.10		coord: 2..196 e-value: 1.8E-45 score: 157.4
None	No IPR available	PANTHER	PTHR11730:SF6	AMMONIUM TRANSPORTER	coord: 17..195
None	No IPR available	PANTHER	PTHR11730	AMMONIUM TRANSPORTER	coord: 17..195
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..38
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 45..66
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 39..44
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 107..196
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 86..106
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 67..85
None	No IPR available	SUPERFAMILY	111352	Ammonium transporter	coord: 10..195
None	No IPR available	TMHMM	TMhelix		coord: 45..67
None	No IPR available	TMHMM	TMhelix		coord: 20..38
None	No IPR available	TMHMM	TMhelix		coord: 87..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9981	contig	Ecto-sp9_F_contig9981:1901..4729 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9981.18047.1	mRNA_Ecto-sp9_F_contig9981.18047.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9981 1901..4729 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9981.18047.1 ID=prot_Ecto-sp9_F_contig9981.18047.1|Name=mRNA_Ecto-sp9_F_contig9981.18047.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=196bp
ESPFAATPGNSTAVSFLDCLFQWSFAATCTTVVSGAVADRIPVKAYLVYA
FLTSALFYPLLAHAVWTDDGWASPARENPLFGCAGVIDFAGSGIVHMFGG
AIGLFISRKVKSRGGRFFPPKHWDGGANGSKLKNHTDQPQLNEAGFRSND
PAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024041	NH4_transpt_AmtB-like_dom
IPR029020	Ammonium/urea_transptr