prot_Ecto-sp9_F_contig9979.18041.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9979.18041.1
Unique Nameprot_Ecto-sp9_F_contig9979.18041.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length164
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9979.18041.1 vs.
Match: Selenoprotein (T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G767_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 2.400e-90
Identity = 147/163 (90.18%), Postives = 147/163 (90.18%), Query Frame = 0 
Query:    1 MVEPGAAAGQPPGGERNGMSFSNRMLLLAILYLFIKRYVGDGAAGKSPATSDKAPAGAASGAREVPVAPLAESVPTKHMNHARPAIDDPEDEFAGMGGSTKNTGGGSLGSSNRDDARSAAQQLAVADSSVEFGGATSLGXXXXXXXXXXXGDVPQVLVQFCVS 163
            MVEPGA AGQPPGGERNGMSFSNRMLLLAILYLFIKRYVGDGAAGKSPATSDK PAGAASGAREVPVAPLAE VPTKHMNHARPAIDDPEDEFAGMGGSTKNTGGGSLGSSNRDDARSAAQQLAVADSSVEFGG  SLG           GDVPQVLVQFCVS
Sbjct:    1 MVEPGADAGQPPGGERNGMSFSNRMLLLAILYLFIKRYVGDGAAGKSPATSDKPPAGAASGAREVPVAPLAEIVPTKHMNHARPAIDDPEDEFAGMGGSTKNTGGGSLGSSNRDDARSAAQQLAVADSSVEFGGTASLGAVTGAGAVGSGGDVPQVLVQFCVS 163
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9979.18041.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Selenoprotein2.400e-9090.18T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9979contigEcto-sp9_F_contig9979:1170..4483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9979.18041.1mRNA_Ecto-sp9_F_contig9979.18041.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9979 2..4533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9979.18041.1 ID=prot_Ecto-sp9_F_contig9979.18041.1|Name=mRNA_Ecto-sp9_F_contig9979.18041.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=164bp
MVEPGAAAGQPPGGERNGMSFSNRMLLLAILYLFIKRYVGDGAAGKSPAT
SDKAPAGAASGAREVPVAPLAESVPTKHMNHARPAIDDPEDEFAGMGGST
KNTGGGSLGSSNRDDARSAAQQLAVADSSVEFGGATSLGAVTGAGAVGGG
GDVPQVLVQFCVS*
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