prot_Ecto-sp9_F_contig9969.18033.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9969.18033.1
Unique Nameprot_Ecto-sp9_F_contig9969.18033.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length188
Homology
BLAST of mRNA_Ecto-sp9_F_contig9969.18033.1 vs.
Match: GDT1 (family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTH0_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 1.020e-100
Identity = 175/201 (87.06%), Postives = 181/201 (90.05%), Query Frame = 0
Query:    1 MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILSRTYTHYASALLFLYFGFKMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIXXXXXXXXXXXXXRRASTAANCHRRC--------------VITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 187
            MAMSHPRLAVFGGA+GALAVMTVLSAALGYALPA+LSRTYTHYASALLFLYFG +MLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFD+EGGGAI  XXXXXXXXXXXRRASTAA C  RC              V+TMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGV+GHSLCTGMAVIGGKLLAAR
Sbjct:   75 MAMSHPRLAVFGGAIGALAVMTVLSAALGYALPAVLSRTYTHYASALLFLYFGCRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDLEGGGAIGGXXXXXXXXXXXRRASTAAKCCLRCAALADAPLRLGDSVVLTMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVIGHSLCTGMAVIGGKLLAAR 275          
BLAST of mRNA_Ecto-sp9_F_contig9969.18033.1 vs.
Match: GDT1 (family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN76_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 3.700e-96
Identity = 158/187 (84.49%), Postives = 161/187 (86.10%), Query Frame = 0
Query:    1 MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILSRTYTHYASALLFLYFGFKMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIXXXXXXXXXXXXXRRASTAANCHRRCVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 187
            MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAIL RTYTHYASALLFLYFGF+MLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAI                       R  V+TMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGV+GHSLCTGMAVIGGKLLAAR
Sbjct:   75 MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILPRTYTHYASALLFLYFGFRMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIGGA------------GGGGVRSRRGAVMTMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVIGHSLCTGMAVIGGKLLAAR 249          
BLAST of mRNA_Ecto-sp9_F_contig9969.18033.1 vs.
Match: GDT1 (family protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y333_AURAN)

HSP 1 Score: 176 bits (446), Expect = 1.970e-52
Identity = 105/188 (55.85%), Postives = 126/188 (67.02%), Query Frame = 0
Query:    1 MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILSRTYTHYASALLFLYFGFKMLKEGMESHG-GPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIXXXXXXXXXXXXXRRASTAANCHRRCVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 187
            +AM H RL +F GAV ALAVMTVLSAA+GYALPA++ RTYTHYASALLF YFG +MLK+     G G SEEL EVEEEL          +G    D+E  GA                   A       V+  +F +TFLAEWGDRSQIATIALA+ KDP+GVTAGG+VGHS+CTG+AV+GG++LA+R
Sbjct:   28 LAMKHARLVIFLGAVSALAVMTVLSAAMGYALPALMPRTYTHYASALLFFYFGCRMLKDASSMSGSGVSEELGEVEEELGG--------AGHGKKDVEDDGA--------------EAPPPAEETDAVKVLGQAFMLTFLAEWGDRSQIATIALASAKDPYGVTAGGIVGHSMCTGLAVVGGRMLASR 193          
BLAST of mRNA_Ecto-sp9_F_contig9969.18033.1 vs.
Match: GDT1 (family protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HJF0_9STRA)

HSP 1 Score: 179 bits (453), Expect = 4.400e-52
Identity = 104/188 (55.32%), Postives = 128/188 (68.09%), Query Frame = 0
Query:    1 MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILSRTYTHYASALLFLYFGFKMLKEGMESHGG-PSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIXXXXXXXXXXXXXRRASTAANCHRRCVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 187
            +AM H R A+F GAV ALA+MTVLSAA+G+ALP +L R YTHYASALLFLYFG ++LK+  E  GG PS+EL EVEEEL  K++            +E G                 ++    N     +IT +F++TFLAEWGDRSQIATIALA  KDPFGVT GG++GHSLCTG+AV+GG+LLAAR
Sbjct:  143 LAMRHSRGAIFTGAVAALALMTVLSAAMGFALPNLLPRKYTHYASALLFLYFGIRLLKDASEMRGGGPSDELQEVEEELISKKDCNE-------TSLENG--------------QESKSGRMKNGDTTRIITQAFTLTFLAEWGDRSQIATIALAAAKDPFGVTLGGIIGHSLCTGIAVVGGRLLAAR 309          
BLAST of mRNA_Ecto-sp9_F_contig9969.18033.1 vs.
Match: GDT1 (family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAP1_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.950e-51
Identity = 119/188 (63.30%), Postives = 134/188 (71.28%), Query Frame = 0
Query:    1 MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILSRTYTHYASALLFLYFGFKMLKEGMESH-GGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIXXXXXXXXXXXXXRRASTAANCHRRCVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 187
            MAM + R+ VF GA+ ALA+MTVLSAALG+ALP IL R YTHYA ALLFLYFG KMLKEG E+  GGPSEEL EVE+EL  KR  +    G        G   XXXXXXXXXXXXX     A       V +   ++TFLAEWGDRSQIATIALA  KD  GVT GG++GHSLCTGMAV+GG+LLAAR
Sbjct:  119 MAMQYSRMLVFAGAITALAIMTVLSAALGFALPNILPREYTHYAGALLFLYFGVKMLKEGFEADDGGPSEELAEVEQELMLKRNAD---EGDVEQTPHSGNGXXXXXXXXXXXXXXXXXXXADKKDAWGVFSQGLTLTFLAEWGDRSQIATIALAAAKDVVGVTVGGILGHSLCTGMAVVGGRLLAAR 303          
BLAST of mRNA_Ecto-sp9_F_contig9969.18033.1 vs.
Match: GDT1 (family protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK3_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.010e-51
Identity = 119/215 (55.35%), Postives = 145/215 (67.44%), Query Frame = 0
Query:    1 MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILSRTYTHYASALLFLYFGFKMLKE--GMESHGGPSEELTEVEEELAKKREGEAK---------KSGPAAFDMEGGGAIXXXXXXXXXXXXXRRASTAANCHRRC-----------------VITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 187
            +AM + RL +FGGA+ AL +MT+LSAA+G  LP +L R YTHYASALLFLYFG K++ E  GME   GPS+EL EVEEEL  K+EG A          ++G      +G G   XXXXXXXXXXXX+ AS A   H R                  V T + ++TFLAEWGDRSQIATIALA  KDP+GVTAGG++GHSLCTG+AV+GG++LAAR
Sbjct:  132 LAMRYDRLLIFGGAISALIIMTILSAAIGNVLPNVLPRIYTHYASALLFLYFGIKLIVEARGMEG-SGPSDELQEVEEELIHKKEGRASPHTLEMTQLENGNGESHAQGSGGFEXXXXXXXXXXXXKGASPAGGAHGRMGSYAQGEGKAKGNAATKVFTQALTLTFLAEWGDRSQIATIALAAAKDPYGVTAGGILGHSLCTGLAVLGGRMLAAR 345          
BLAST of mRNA_Ecto-sp9_F_contig9969.18033.1 vs.
Match: GDT1 (family protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X9M8_DIALT)

HSP 1 Score: 174 bits (440), Expect = 4.080e-51
Identity = 98/188 (52.13%), Postives = 125/188 (66.49%), Query Frame = 0
Query:    1 MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILSRTYTHYASALLFLYFGFKMLKEGMESHGG-PSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIXXXXXXXXXXXXXRRASTAANCHRRCVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 187
            MAM HPR  +F GA+ AL +MTVLS  +G+ALP++L + YTHYA+ALLFL FG ++LK+  +  GG  S+EL EVE EL KK E + +KS     D+E G A              R+ +             SFS+TFLAEWGDRSQIATIALA  KDPFGVT GG +GH+LCTG+AV+GG++LA+R
Sbjct:   50 MAMRHPRGIIFAGAICALGLMTVLSCLMGHALPSMLPKAYTHYAAALLFLVFGVRLLKDAAQMEGGVASDELEEVEAELGKKEEDDPEKSASGLKDVEAGSASS------------RKEAGRKRAFLPPAFVQSFSLTFLAEWGDRSQIATIALAAAKDPFGVTLGGTIGHALCTGLAVVGGRMLASR 225          
BLAST of mRNA_Ecto-sp9_F_contig9969.18033.1 vs.
Match: GDT1 (family protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D9J8_9EUKA)

HSP 1 Score: 176 bits (445), Expect = 6.430e-51
Identity = 106/203 (52.22%), Postives = 132/203 (65.02%), Query Frame = 0
Query:    1 MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILSRTYTHYASALLFLYFGFKMLKEGMESHGGPSEELTEVEEELAKKR-EGEAKK------SGPAAFDMEGGG---------AIXXXXXXXXXXXXXRRASTAANCHRRCVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 187
            +AM   R+ VF GA+ AL VMT LSA +GYALPA+L R YTHYASA+LFL+FG+K+LKEG ES GG S EL EVEEEL +K  EGE         SG    D E GG         A              ++A  A N     +   +F+MTFLAEWGDRSQIATIALA+ KDP+GVT GG +GH++CTG+AV+GG++LA++
Sbjct:  107 LAMKSNRVVVFSGAIAALGVMTALSAMMGYALPALLPRQYTHYASAVLFLFFGYKLLKEGYESEGGASSELQEVEEELEEKEHEGEGGSXXXXXXSGGEEADPEVGGRGSTGAPSLATNIKTWIAKVEADAKKALLAFNVPP--IFVQTFTMTFLAEWGDRSQIATIALASAKDPYGVTIGGTIGHAICTGIAVLGGRMLASK 307          
BLAST of mRNA_Ecto-sp9_F_contig9969.18033.1 vs.
Match: GDT1 (family protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YML5_SYMMI)

HSP 1 Score: 173 bits (439), Expect = 3.110e-50
Identity = 98/187 (52.41%), Postives = 128/187 (68.45%), Query Frame = 0
Query:    1 MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILSRTYTHYASALLFLYFGFKMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIXXXXXXXXXXXXXRRASTAANCHRRCVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 187
            +AM + R  V+ G + ALAVM +LS  +GYALPA+L R YTHYASALLF+YFG ++LK+  E   GPSEEL EVEEEL +K+ G    S   + D+EGG A+                + A       V + +F++ FLAEWGDRSQIATIALA++K+PFGV  GG+VGH+LCTG+AV+GG++LAAR
Sbjct:  111 LAMRNGRTIVYLGCMAALAVMHILSCIMGYALPALLPRAYTHYASALLFVYFGLRLLKDAQEMGDGPSEELQEVEEELIEKKGGRDDNSTEDSNDIEGGKAMRDGGSSGA-------VAYAMKSEHLQVFSQAFTLCFLAEWGDRSQIATIALASSKNPFGVIFGGLVGHALCTGIAVVGGRMLAAR 290          
BLAST of mRNA_Ecto-sp9_F_contig9969.18033.1 vs.
Match: GDT1 (family protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEB3_9STRA)

HSP 1 Score: 173 bits (438), Expect = 5.560e-50
Identity = 99/187 (52.94%), Postives = 125/187 (66.84%), Query Frame = 0
Query:    1 MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILSRTYTHYASALLFLYFGFKMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGGAIXXXXXXXXXXXXXRRASTAANCHRRCVITMSFSMTFLAEWGDRSQIATIALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR 187
            +AM H R+ VF GA+ ALA+MTVLS  +GY LP++L R YTH+ASA+LFLYFG ++L E  E   GPSEEL EVEEEL  K++      GP        G++              +AS      +  +   SF++TFLAEWGDRSQIATIALA+ KDP GVTAGGV+GH LCTG+AV+GG++LAAR
Sbjct:  128 LAMKHSRMLVFAGALSALALMTVLSTMVGYTLPSLLPRAYTHFASAILFLYFGVRLLYESRELSSGPSEELREVEEELIHKKD-----QGPD-------GSLRDPEDDAKLKKAAVQASVLDEQSK--IFAQSFTLTFLAEWGDRSQIATIALASAKDPLGVTAGGVIGHGLCTGLAVVGGRILAAR 300          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9969.18033.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
GDT11.020e-10087.06family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
GDT13.700e-9684.49family protein n=1 Tax=Ectocarpus siliculosus TaxI... [more]
GDT11.970e-5255.85family protein (Fragment) n=1 Tax=Aureococcus anop... [more]
GDT14.400e-5255.32family protein n=1 Tax=Dictyocha speculum TaxID=35... [more]
GDT11.950e-5163.30family protein n=1 Tax=Tribonema minus TaxID=30337... [more]
GDT12.010e-5155.35family protein n=1 Tax=Nannochloropsis salina CCMP... [more]
GDT14.080e-5152.13family protein n=1 Tax=Diacronema lutheri TaxID=20... [more]
GDT16.430e-5152.22family protein n=1 Tax=Palpitomonas bilix TaxID=65... [more]
GDT13.110e-5052.41family protein n=1 Tax=Symbiodinium microadriaticu... [more]
GDT15.560e-5052.94family protein n=2 Tax=Pinguiococcus pyrenoidosus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001727Gdt1 familyPFAMPF01169UPF0016coord: 132..185
e-value: 1.6E-16
score: 60.4
coord: 1..53
e-value: 3.6E-10
score: 40.0
IPR001727Gdt1 familyPANTHERPTHR12608TRANSMEMBRANE PROTEIN HTP-1 RELATEDcoord: 1..187
NoneNo IPR availablePANTHERPTHR12608:SF1TRANSMEMBRANE PROTEIN 165coord: 1..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9969contigEcto-sp9_F_contig9969:936..4796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9969.18033.1mRNA_Ecto-sp9_F_contig9969.18033.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9969 912..4796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9969.18033.1 ID=prot_Ecto-sp9_F_contig9969.18033.1|Name=mRNA_Ecto-sp9_F_contig9969.18033.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=188bp
MAMSHPRLAVFGGAVGALAVMTVLSAALGYALPAILSRTYTHYASALLFL
YFGFKMLKEGMESHGGPSEELTEVEEELAKKREGEAKKSGPAAFDMEGGG
AIGGAGGGGVRAAGGRRASTAANCHRRCVITMSFSMTFLAEWGDRSQIAT
IALATNKDPFGVTAGGVVGHSLCTGMAVIGGKLLAAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001727Gdt1