prot_Ecto-sp9_F_contig9949.18013.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9949.18013.1
Unique Nameprot_Ecto-sp9_F_contig9949.18013.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length273
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9949.18013.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS8_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 6.440e-55
Identity = 93/118 (78.81%), Postives = 104/118 (88.14%), Query Frame = 0 
Query:   36 RVIEADQSLRAARKARALETNRNGQAEKRRPRRDEKMAMLRSLLDVVLEVEPWNSARHISKVGEAWEECGRRVPGFLKEGARSEPRLLVQQQIFRLGEQLNDPTARTPWKSYPEVKRG 153
            RVIEAD+  RAARKA+ LE +R  +AE RRPRRDEKMA+L  LLD VLEVEPWN ARH +KV EAWEECGRRVPG+LKEGAR+EPRLLVQQQ+FRLG+QL DPTA+TPWKSYPEVKRG
Sbjct:   16 RVIEADKRRRAARKAKGLEASRKARAEMRRPRRDEKMALLLRLLDAVLEVEPWNLARH-TKVSEAWEECGRRVPGYLKEGARTEPRLLVQQQVFRLGDQLIDPTAKTPWKSYPEVKRG 132
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BLAST of mRNA_Ecto-sp9_F_contig9949.18013.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K2_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 3.790e-17
Identity = 53/116 (45.69%), Postives = 63/116 (54.31%), Query Frame = 0 
Query:  124 VQQQIFRLGEQLNDPTARTPWKSYPEVKRGVEGVVAKLAATRRYERKFGLHQQQAGGGSQKLQPGNXXXXXXXXXXXXXXXXXXAAGVVEPTKSNLATVETAHASREQPPTAQQRQ 239
            +Q+ + R+G QL DPT +T WK+YPEV R VE VVA +A TRRY  KFG  QQ                                 GVVEP KSN+AT+ETAH S EQP T+ QRQ
Sbjct:    1 MQKHVTRMGRQLKDPTVKTTWKTYPEVMRRVEDVVASMAPTRRYRDKFGPQQQH--------------------------------GVVEPKKSNVATLETAHDSPEQPATSLQRQ 84
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9949.18013.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized6.440e-5578.81protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.790e-1745.69protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9949contigEcto-sp9_F_contig9949:1272..4641 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9949.18013.1mRNA_Ecto-sp9_F_contig9949.18013.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9949 1170..4917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9949.18013.1 ID=prot_Ecto-sp9_F_contig9949.18013.1|Name=mRNA_Ecto-sp9_F_contig9949.18013.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=273bp
MIGTRVKRIPESGEGDETKRRRCQDIDSVKSRLAARVIEADQSLRAARKA
RALETNRNGQAEKRRPRRDEKMAMLRSLLDVVLEVEPWNSARHISKVGEA
WEECGRRVPGFLKEGARSEPRLLVQQQIFRLGEQLNDPTARTPWKSYPEV
KRGVEGVVAKLAATRRYERKFGLHQQQAGGGSQKLQPGNGGNGASSPGTA
RDGTAAPAAGVVEPTKSNLATVETAHASREQPPTAQQRQQQGPGKPEKSC
ILRLAFRSYSTAAEQVSTTAAC*
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