prot_Ecto-sp9_F_contig9924.17994.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9924.17994.1
Unique Nameprot_Ecto-sp9_F_contig9924.17994.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length219
Homology
BLAST of mRNA_Ecto-sp9_F_contig9924.17994.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B9_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 1.200e-46
Identity = 133/169 (78.70%), Postives = 133/169 (78.70%), Query Frame = 0
Query:    1 MPGFSLGGEGSNAGGALGSQEKRDEGGGDSQQRDESAALPGXGSSVRPRGALLGSGGGSRSGTHAKAGGDXXXQNSENTGXXXXXXXXXXXXXXXXXXASTXXXXVATPATPP-TGKRQRHGKAKRTGASPEDEDAEEEDPTSKPKKSKKTAKQRGEKASEDHRPSGAK 168
            MPGFSLGGE SNAGGA GS                   LPG GSSVR RGAL GSGGGSRSGTHAKAGGD   QN ENT XXXXXXXXXXXXXXXXXX ST    VATPATPP TGKRQRHGKAKRTGAS EDEDAEEEDPTSKPKKSKKTAKQRGEKASEDHRPSGAK
Sbjct:  143 MPGFSLGGERSNAGGASGSXXXXXXXXXXXXXXXXXXXLPGGGSSVRLRGALPGSGGGSRSGTHAKAGGDGSAQNGENTXXXXXXXXXXXXXXXXXXXXSTASGSVATPATPPPTGKRQRHGKAKRTGASVEDEDAEEEDPTSKPKKSKKTAKQRGEKASEDHRPSGAK 311          
BLAST of mRNA_Ecto-sp9_F_contig9924.17994.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P2_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 3.220e-37
Identity = 99/128 (77.34%), Postives = 100/128 (78.12%), Query Frame = 0
Query:    1 MPGFSLGGEGSNAGGALGSQEKRDEGGGDSQQRDESAALPGXGSSVRPRGALLGSGGGSRSGTHAKAGGDXXXQNSENTGXXXXXXXXXXXXXXXXXXASTXXXXVATPATPPTGKRQRHGKAKRTGA 128
            MPGFSLGGEGSNAGGA GS +KR EGGGDSQQR ESAAL  X   VRPRGAL GSGG  RSGTHAKAG  XX QN ENTG XXXXXXXXXX       AST    VATPATPPTGKRQRHGKAKRTGA
Sbjct:    1 MPGFSLGGEGSNAGGASGSHQKRVEGGGDSQQRHESAALXXXXXXVRPRGALFGSGGXXRSGTHAKAGXXXXSQNGENTGEXXXXXXXXXXKGKQRG-ASTASGSVATPATPPTGKRQRHGKAKRTGA 127          
BLAST of mRNA_Ecto-sp9_F_contig9924.17994.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE76_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.580e-12
Identity = 77/121 (63.64%), Postives = 79/121 (65.29%), Query Frame = 0
Query:    1 MPGFSLGGEGSNAGGALGSQEKRDEGGGDSQQRDESAALPGXGSSVRPRGALLGSGGGSRSGTHAKAGGDXXXQNSENTGXXXXXXXXXXXXXXXXXXASTXXXXVATPATPPTGKRQRHG 121
            MPGFSLGGE S+A GA GSQEK DEGGGDS QRDESAA PG GSSVR RG                    XXXQ  +NTG XXXXXXXXXXXXXXX    T    VATP T PTGKRQR G
Sbjct:   75 MPGFSLGGERSSACGASGSQEKGDEGGGDSGQRDESAAPPGGGSSVRSRGXXXXXXXXXXXXXXXXXXXXXXXQTGDNTGEXXXXXXXXXXXXXXX----TVSGSVATPTTLPTGKRQRQG 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9924.17994.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized1.200e-4678.70protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.220e-3777.34protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.580e-1263.64protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9924contigEcto-sp9_F_contig9924:1863..3769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9924.17994.1mRNA_Ecto-sp9_F_contig9924.17994.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9924 1848..3769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9924.17994.1 ID=prot_Ecto-sp9_F_contig9924.17994.1|Name=mRNA_Ecto-sp9_F_contig9924.17994.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=219bp
MPGFSLGGEGSNAGGALGSQEKRDEGGGDSQQRDESAALPGGGSSVRPRG
ALLGSGGGSRSGTHAKAGGDGSSQNSENTGEGSGKGKGKEKKKGKQRGAS
TASASVATPATPPTGKRQRHGKAKRTGASPEDEDAEEEDPTSKPKKSKKT
AKQRGEKASEDHRPSGAKPKGKKKTKSPKARQQEEEGSADKSKAKSKPKS
KGKKKARQEEAEDSDDNDA
back to top