prot_Ecto-sp9_F_contig9917.17984.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9917.17984.1
Unique Nameprot_Ecto-sp9_F_contig9917.17984.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length302
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9917.17984.1 vs.
Match: DNA (repair enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY4_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 1.980e-31
Identity = 220/301 (73.09%), Postives = 226/301 (75.08%), Query Frame = 0 
Query:    1 MPMVKELERGSFAQPRIDRYFMAYHDNKRVAAIKSKRLRTAVEDLAQGSTEVVTVDGSAVGKVTATSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRXXXXXXXXXTQIDQPTVSSQPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SKRNTRATRSGGGIGSPAPXXXXXXXXXXXXXXXXXXXXXXXXEPGSDVEGEDAIDEDDDADYVGSDXXXXXXXXXXXXXXXXXDRGAGRFSGGSRQTKPRR 297
            MPMVKEL+RGSFAQ RIDRYFMAYHDNKRVAAIKSKRLRTAVEDLAQGS+EV+TVDGSAVGKV A SAKXXXXXXXXXXXXXXXXXXXXXXXX                 VR    XXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXX   XXXXXXX              SKRNTRAT SGG +G+PAP    XXXXXXXXXXXXXXXXXXX EPGSDVEGED IDE+DDADYVGSD XXXXXXXXXXXXX   D   GR SG S QTKPRR
Sbjct: 1535 MPMVKELDRGSFAQSRIDRYFMAYHDNKRVAAIKSKRLRTAVEDLAQGSSEVITVDGSAVGKVNAKSAKXXXXXXXXXXXXXXXXXXXXXXXXKTKRRQRGAAGTSPESTVRDGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDAXXXXXXXXRSAXXXXXXXAGSAATPANGGQGQSKRNTRATLSGGEVGTPAPPPGKXXXXXXXXXXXXXXXXXXXSEPGSDVEGEDGIDEEDDADYVGSDSXXXXXXXXXXXXXD--DGSVGRMSGES-QTKPRR 1832
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BLAST of mRNA_Ecto-sp9_F_contig9917.17984.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ8_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.030e-29
Identity = 82/134 (61.19%), Postives = 84/134 (62.69%), Query Frame = 0 
Query:    1 MPMVKELERGSFAQPRIDRYFMAYHDNKRVAAIKSKRLRTAVEDLAQGSTEVVTVDGSAVGKVTATSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRXXXXXXXXXTQIDQPTVSSQPS 134
            MPMVKELERGSFAQPRIDRYFMAYHDNKRVAAIKSKRLRTAVEDLAQGSTEV+TVDGS VG+ TAT AK                                         VR      XXXTQIDQPTVSSQPS
Sbjct: 1524 MPMVKELERGSFAQPRIDRYFMAYHDNKRVAAIKSKRLRTAVEDLAQGSTEVITVDGSPVGERTATGAKRKRKEGDKSHKGQDNNDDAPSGKTKRWQRGAASGSPKST--VRAGDGDDXXXTQIDQPTVSSQPS 1655
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9917.17984.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
DNA1.980e-3173.09repair enzyme n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Uncharacterized1.030e-2961.19protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9917contigEcto-sp9_F_contig9917:97..2137 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9917.17984.1mRNA_Ecto-sp9_F_contig9917.17984.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9917 2..2294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9917.17984.1 ID=prot_Ecto-sp9_F_contig9917.17984.1|Name=mRNA_Ecto-sp9_F_contig9917.17984.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=302bp
MPMVKELERGSFAQPRIDRYFMAYHDNKRVAAIKSKRLRTAVEDLAQGST
EVVTVDGSAVGKVTATSAKKKRKKGDKSQKEHENNDNDDAPSGNTKRRQR
GTASTSPKSTVRAGDDDDDDDTQIDQPTVSSQPSPSPRTGTRGATTRAKR
SRPPPTPAKNADASGGGNGGRRSARSNKNASAGSAATPANGGQGQSKRNT
RATRSGGGIGSPAPPPSKRRNPRRMVASSGGAGAGGGGEPGSDVEGEDAI
DEDDDADYVGSDGDDDDSSDNGDDNDNDDDRGAGRFSGGSRQTKPRRKKR
S*
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