prot_Ecto-sp9_F_contig9909.17975.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9909.17975.1
Unique Nameprot_Ecto-sp9_F_contig9909.17975.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length101
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9909.17975.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N8_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 5.380e-44
Identity = 89/101 (88.12%), Postives = 91/101 (90.10%), Query Frame = 0 
Query:    1 RVLTLQHEEQRQAARDRVEKLASTLKSLESYFGPGPGASSTTKLENAWLGEGVELQQKLQKHRESAVARFSVTLSTNKKAKXXXXXXXXXDSTSIASLLSH 101
            RVLTLQHE+QRQAARDRVEKLASTLKSLESYFGPGPGASSTTKLENAWLGEGVELQQKLQKHRESAVARFSVTLS+NKKA          DSTSIASLLSH
Sbjct: 1093 RVLTLQHEDQRQAARDRVEKLASTLKSLESYFGPGPGASSTTKLENAWLGEGVELQQKLQKHRESAVARFSVTLSSNKKANKGGRGGGG-DSTSIASLLSH 1192
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BLAST of mRNA_Ecto-sp9_F_contig9909.17975.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H8_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 7.370e-33
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0 
Query:    1 RVLTLQHEEQRQAARDRVEKLASTLKSLESYFGPGPGASSTTKLENAWLGEGVELQQKLQKHRESAVAR 69
            RVLTLQHEEQRQAARDRVEKLASTLK LESYFGPGPGASSTTKLENAWLGEGVELQQKLQ HRESAVAR
Sbjct:  648 RVLTLQHEEQRQAARDRVEKLASTLKGLESYFGPGPGASSTTKLENAWLGEGVELQQKLQNHRESAVAR 716
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9909.17975.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized5.380e-4488.12protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized7.370e-3397.10protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9909contigEcto-sp9_F_contig9909:1916..3365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9909.17975.1mRNA_Ecto-sp9_F_contig9909.17975.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9909 1916..3366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9909.17975.1 ID=prot_Ecto-sp9_F_contig9909.17975.1|Name=mRNA_Ecto-sp9_F_contig9909.17975.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=101bp
RVLTLQHEEQRQAARDRVEKLASTLKSLESYFGPGPGASSTTKLENAWLG
EGVELQQKLQKHRESAVARFSVTLSTNKKAKKGGRGGGGGDSTSIASLLS
H
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