prot_Ecto-sp9_F_contig9904.17972.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9904.17972.1
Unique Nameprot_Ecto-sp9_F_contig9904.17972.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length101
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9904.17972.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQP5_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 3.170e-43
Identity = 95/107 (88.79%), Postives = 95/107 (88.79%), Query Frame = 0 
Query:    1 MDQTTRVNSMPPAPIFGATPGGDGNGGMGNSKFINIDEIFADCFMDGDSDLLGLGGTGAQGGAAEGQGADSMGXXXXXXXXXXXXXE------ELNLNPNAAISASG 101
            MDQTT VNSMPPAPIFG TPGGDGNGGMGNSKFINIDEIFADCFMDGDSDLLGLGGTGAQG AAEGQGADSMG XXXXXXXXXXXX        LNLNPNAAISASG
Sbjct:    1 MDQTTSVNSMPPAPIFGVTPGGDGNGGMGNSKFINIDEIFADCFMDGDSDLLGLGGTGAQGEAAEGQGADSMGGXXXXXXXXXXXXXXXXXELSLNLNPNAAISASG 107
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BLAST of mRNA_Ecto-sp9_F_contig9904.17972.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH1_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 2.060e-5
Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 0 
Query:    3 QTTRVNSMPPAPIFGATPGGDGNGGMGNSKFINIDEIFADCFMDGDSDLLGL 54
            + + ++S P  P+FG   G DG      +K+INIDEIFADCFM+ D DL+ L
Sbjct:    2 EASGLSSTPQPPLFGMAGGTDG----AQNKYINIDEIFADCFMESDPDLMTL 49
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9904.17972.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized3.170e-4388.79protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.060e-548.08protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9904contigEcto-sp9_F_contig9904:490..792 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9904.17972.1mRNA_Ecto-sp9_F_contig9904.17972.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9904 490..3692 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9904.17972.1 ID=prot_Ecto-sp9_F_contig9904.17972.1|Name=mRNA_Ecto-sp9_F_contig9904.17972.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=101bp
MDQTTRVNSMPPAPIFGATPGGDGNGGMGNSKFINIDEIFADCFMDGDSD
LLGLGGTGAQGGAAEGQGADSMGGGGGGGGGRAGGGEELNLNPNAAISAS
G
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