prot_Ecto-sp9_F_contig9899.17967.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9899.17967.1
Unique Name	prot_Ecto-sp9_F_contig9899.17967.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	59

Homology

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9899.17967.1 vs.
Match: Heat (shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB23_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 2.860e-16
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query:    1 MRSFVDKVKAGKWGNVMSAVASLGAAATSVGVXXXXXXXXXXXXXXARGLEELTGSVEV 59
            MRSFVDKVKAGKWGNVMSAVASLGAAATSVGVXXXXXXXXXXXXXXARGLEELTGSVEV
Sbjct:  203 MRSFVDKVKAGKWGNVMSAVASLGAAATSVGVXXXXXXXXXXXXXXARGLEELTGSVEV 261

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9899.17967.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9899.17967.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
Heat	2.860e-16	100.00	shock protein 40 like protein/ DnaJ domain contain...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..38
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 19..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 31..38
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 39..59
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9899	contig	Ecto-sp9_F_contig9899:4623..4799 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9899.17967.1	mRNA_Ecto-sp9_F_contig9899.17967.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9899 4614..4799 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9899.17967.1 ID=prot_Ecto-sp9_F_contig9899.17967.1|Name=mRNA_Ecto-sp9_F_contig9899.17967.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=59bp
MRSFVDKVKAGKWGNVMSAVASLGAAATSVGVSAGVAAAEPLAKDLARGL
EELTGSVEV