prot_Ecto-sp9_F_contig9893.17965.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9893.17965.1
Unique Nameprot_Ecto-sp9_F_contig9893.17965.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length119
Homology
BLAST of mRNA_Ecto-sp9_F_contig9893.17965.1 vs.
Match: Clathrin (heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWD1_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 3.030e-67
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
Query:    1 VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ 119
            VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ
Sbjct:  894 VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ 1012          
BLAST of mRNA_Ecto-sp9_F_contig9893.17965.1 vs.
Match: Clathrin (heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH1_9STRA)

HSP 1 Score: 191 bits (485), Expect = 4.800e-54
Identity = 99/121 (81.82%), Postives = 112/121 (92.56%), Query Frame = 0
Query:    1 VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGET--QEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ 119
            VLGKYCEKLDPS+AFLAYK+A G CDDD++RVTSENGL+K+QARYLVE+QD+DLWA+VLT  + +   +EPASRRALI+QVVQTALPETK ADEVSTTVKAFMNADLPSELIELLERIVLQ
Sbjct:  909 VLGKYCEKLDPSLAFLAYKRANGECDDDIIRVTSENGLYKDQARYLVERQDLDLWARVLTPPDMDNTKKEPASRRALIDQVVQTALPETKVADEVSTTVKAFMNADLPSELIELLERIVLQ 1029          
BLAST of mRNA_Ecto-sp9_F_contig9893.17965.1 vs.
Match: Clathrin (heavy chain n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BEN2_PYTIN)

HSP 1 Score: 183 bits (464), Expect = 3.250e-51
Identity = 94/120 (78.33%), Postives = 111/120 (92.50%), Query Frame = 0
Query:    1 VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAE-GETQEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ 119
            V+GK+CEKLDP++A LAY++AGGACDDDL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E GET+ PA RRALI+Q+VQTALPETKN DEVSTTV+AFMNA+LP+ELIELLERIVLQ
Sbjct: 1312 VVGKFCEKLDPALAVLAYRRAGGACDDDLIRVTTENGLFKDLARYLVERQDLDLWGKVLKKQEEGETESPA-RRALIDQIVQTALPETKNPDEVSTTVRAFMNAELPNELIELLERIVLQ 1430          
BLAST of mRNA_Ecto-sp9_F_contig9893.17965.1 vs.
Match: Clathrin (heavy chain (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V906_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.100e-50
Identity = 91/119 (76.47%), Postives = 107/119 (89.92%), Query Frame = 0
Query:    1 VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ 119
            V+GK+CEKLDP++A+LAY++AGGACDDDL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E    E  SRRALI+QVVQTALPET N DEVSTTV+AFMNA+LP+ELIELLERIVLQ
Sbjct:  502 VVGKFCEKLDPALAYLAYRRAGGACDDDLIRVTTENGLFKDLARYLVERQDLDLWGKVLVKQEEGEPESPSRRALIDQVVQTALPETTNPDEVSTTVRAFMNAELPNELIELLERIVLQ 620          
BLAST of mRNA_Ecto-sp9_F_contig9893.17965.1 vs.
Match: Clathrin (heavy chain n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMC0_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.290e-50
Identity = 90/119 (75.63%), Postives = 107/119 (89.92%), Query Frame = 0
Query:    1 VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ 119
            ++GK+CEKLDP++A+LAY++AGGACDDDL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E    E  SRRALI+QVVQTALPET N DEVSTTV+AFMNA+LP+ELIELLERIVLQ
Sbjct:  166 IVGKFCEKLDPALAYLAYRRAGGACDDDLIRVTTENGLFKDLARYLVERQDLDLWGKVLVKQEEGEAESPSRRALIDQVVQTALPETTNPDEVSTTVRAFMNAELPNELIELLERIVLQ 284          
BLAST of mRNA_Ecto-sp9_F_contig9893.17965.1 vs.
Match: Clathrin (heavy chain n=31 Tax=Oomycota TaxID=4762 RepID=K3WLC2_GLOUD)

HSP 1 Score: 181 bits (459), Expect = 1.530e-50
Identity = 91/119 (76.47%), Postives = 107/119 (89.92%), Query Frame = 0
Query:    1 VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ 119
            V+G +CEKLDP++AFLAY++AGGACD+DL+RVT+ENGLFK+ ARYLVE+QD+DLW KVL K E    E  +RRALI+QVVQTALPETKN DEVSTTV+AFMNA+LPSELIELLERIVLQ
Sbjct:  909 VVGLFCEKLDPALAFLAYRRAGGACDEDLIRVTTENGLFKDLARYLVERQDLDLWGKVLVKQEEGESESPNRRALIDQVVQTALPETKNPDEVSTTVRAFMNAELPSELIELLERIVLQ 1027          
BLAST of mRNA_Ecto-sp9_F_contig9893.17965.1 vs.
Match: Clathrin (heavy chain n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5K0_9STRA)

HSP 1 Score: 179 bits (455), Expect = 5.280e-50
Identity = 88/119 (73.95%), Postives = 108/119 (90.76%), Query Frame = 0
Query:    1 VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ 119
            V+GK+CEKLDP++AFLAY++AGGACD+DL+RVT +NGLFK+ ARYLVE+QD+DLW KVL K +   QE  +RRALI+QVVQTALPETKN DEVSTTV+AFMNA+LP+EL+ELLERIV+Q
Sbjct:  911 VVGKFCEKLDPALAFLAYRRAGGACDEDLIRVTIDNGLFKDLARYLVERQDLDLWGKVLMKQDENLQESPNRRALIDQVVQTALPETKNPDEVSTTVRAFMNAELPNELMELLERIVMQ 1029          
BLAST of mRNA_Ecto-sp9_F_contig9893.17965.1 vs.
Match: Clathrin-link (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWJ0_9STRA)

HSP 1 Score: 179 bits (455), Expect = 5.360e-50
Identity = 92/120 (76.67%), Postives = 111/120 (92.50%), Query Frame = 0
Query:    1 VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKAE-GETQEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ 119
            V+G +CEKLDP++AFLAY++AGGACD+DL+RVT+ENGLFK+ ARYLVE+QD++LW KVL K E GET+ P +RRALI+QVVQTALPETKN DEVSTTV+AFMNA+LP+ELIELLERIVLQ
Sbjct:  909 VVGVFCEKLDPALAFLAYRRAGGACDEDLIRVTTENGLFKDLARYLVERQDLELWGKVLVKQEEGETESP-NRRALIDQVVQTALPETKNPDEVSTTVRAFMNAELPNELIELLERIVLQ 1027          
BLAST of mRNA_Ecto-sp9_F_contig9893.17965.1 vs.
Match: Clathrin-link (domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C3W3_SAPPC)

HSP 1 Score: 177 bits (449), Expect = 3.360e-49
Identity = 91/120 (75.83%), Postives = 109/120 (90.83%), Query Frame = 0
Query:    1 VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKA-EGETQEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ 119
            V+GK+CEKLDP++AFLAY++AGGACDDDL+RVT+EN LFK+ ARYLV +QD+DLW KVL KA EGE + P +RRALI+QVVQTALPE +N DEVSTTV+AFMNA+LP+ELIELLERIVLQ
Sbjct:  906 VVGKFCEKLDPALAFLAYQRAGGACDDDLIRVTTENSLFKDLARYLVHRQDLDLWGKVLVKAVEGEVEAP-NRRALIDQVVQTALPEARNPDEVSTTVRAFMNAELPNELIELLERIVLQ 1024          
BLAST of mRNA_Ecto-sp9_F_contig9893.17965.1 vs.
Match: Clathrin-link (domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZXA9_9STRA)

HSP 1 Score: 177 bits (449), Expect = 3.420e-49
Identity = 92/120 (76.67%), Postives = 108/120 (90.00%), Query Frame = 0
Query:    1 VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQDMDLWAKVLTKA-EGETQEPASRRALIEQVVQTALPETKNADEVSTTVKAFMNADLPSELIELLERIVLQ 119
            V+GK+CEKLDP++AFLAY++A GACDDDL+RVT+EN LFK+ ARYLV +QD+DLW KVL KA EGE + P SRRALI+QVVQTALPE KN DEVSTTV+AFMNA+LP+ELIELLERIVLQ
Sbjct: 1442 VVGKFCEKLDPALAFLAYQRANGACDDDLIRVTTENSLFKDLARYLVHRQDLDLWGKVLVKAVEGEAEAP-SRRALIDQVVQTALPEAKNPDEVSTTVRAFMNAELPNELIELLERIVLQ 1560          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9893.17965.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Clathrin3.030e-67100.00heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
Clathrin4.800e-5481.82heavy chain n=1 Tax=Tribonema minus TaxID=303371 R... [more]
Clathrin3.250e-5178.33heavy chain n=2 Tax=Pythium TaxID=4797 RepID=A0A2D... [more]
Clathrin1.100e-5076.47heavy chain (Fragment) n=1 Tax=Phytophthora megaka... [more]
Clathrin1.290e-5075.63heavy chain n=1 Tax=Phytophthora palmivora var. pa... [more]
Clathrin1.530e-5076.47heavy chain n=31 Tax=Oomycota TaxID=4762 RepID=K3W... [more]
Clathrin5.280e-5073.95heavy chain n=1 Tax=Albugo laibachii Nc14 TaxID=89... [more]
Clathrin-link5.360e-5076.67domain-containing protein n=1 Tax=Pythium brassicu... [more]
Clathrin-link3.360e-4975.83domain-containing protein n=1 Tax=Saprolegnia para... [more]
Clathrin-link3.420e-4976.67domain-containing protein n=8 Tax=Aphanomyces asta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatPFAMPF00637Clathrincoord: 2..60
e-value: 1.4E-7
score: 31.5
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatPROSITEPS50236CHCRcoord: 84..119
score: 11.836
NoneNo IPR availablePANTHERPTHR10292CLATHRIN HEAVY CHAIN RELATEDcoord: 1..119
NoneNo IPR availablePANTHERPTHR10292:SF1CLATHRIN HEAVY CHAINcoord: 1..119
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9893contigEcto-sp9_F_contig9893:3974..4802 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9893.17965.1mRNA_Ecto-sp9_F_contig9893.17965.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9893 3974..4802 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9893.17965.1 ID=prot_Ecto-sp9_F_contig9893.17965.1|Name=mRNA_Ecto-sp9_F_contig9893.17965.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=119bp
VLGKYCEKLDPSMAFLAYKKAGGACDDDLLRVTSENGLFKNQARYLVEKQ
DMDLWAKVLTKAEGETQEPASRRALIEQVVQTALPETKNADEVSTTVKAF
MNADLPSELIELLERIVLQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000547Clathrin_H-chain/VPS_repeat
IPR016024ARM-type_fold