prot_Ecto-sp9_F_contig9884.17956.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9884.17956.1
Unique Nameprot_Ecto-sp9_F_contig9884.17956.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length80
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9884.17956.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 1.180e-39
Identity = 77/80 (96.25%), Postives = 80/80 (100.00%), Query Frame = 0 
Query:    1 VEVRDQERCRRRRDERQFEAWEKSRVQSQAVVDMALDRIEQLRLPDKQDDVVNRIASTSQEQSKVPYWLRTRAARFVRMQ 80
            VEVRDQERCRRRRDERQFEAWEKSRVQSQAVVDMALDRIEQLR+PDKQDDV+NRIASTSQEQ+KVPYWLRTRAARFVRMQ
Sbjct: 1799 VEVRDQERCRRRRDERQFEAWEKSRVQSQAVVDMALDRIEQLRMPDKQDDVINRIASTSQEQAKVPYWLRTRAARFVRMQ 1878
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BLAST of mRNA_Ecto-sp9_F_contig9884.17956.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG36_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 7.900e-22
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0 
Query:   30 AVVDMALDRIEQLRLPDKQDDVVNRIASTSQEQSKVPYWLRTRAARFVRMQ 80
            AVVDMALDRIEQLRLPDKQDDV+NRIASTSQEQSKVPYWLRTRAARFVRMQ
Sbjct: 2248 AVVDMALDRIEQLRLPDKQDDVINRIASTSQEQSKVPYWLRTRAARFVRMQ 2298
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9884.17956.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.180e-3996.25protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized7.900e-2298.04protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9884contigEcto-sp9_F_contig9884:1087..2048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9884.17956.1mRNA_Ecto-sp9_F_contig9884.17956.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9884 1087..2050 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9884.17956.1 ID=prot_Ecto-sp9_F_contig9884.17956.1|Name=mRNA_Ecto-sp9_F_contig9884.17956.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=80bp
VEVRDQERCRRRRDERQFEAWEKSRVQSQAVVDMALDRIEQLRLPDKQDD
VVNRIASTSQEQSKVPYWLRTRAARFVRMQ
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