prot_Ecto-sp9_F_contig9883.17955.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9883.17955.1
Unique Nameprot_Ecto-sp9_F_contig9883.17955.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length160
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9883.17955.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U5_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 1.800e-28
Identity = 80/175 (45.71%), Postives = 96/175 (54.86%), Query Frame = 0 
Query:    1 MKNVLKSVKKDPDMWKRYEEYQGELQTVLLAQNIAELIPEPEPSAEDGGGCAGSGDEDDADGG------------DFMDAGDEGGGDYEEVDEEDHRKRSQSXXXXXXXXXXXXXXXXXXXXXX----DPVTASASSVSGGKKNQQRKSKRISLGKLLTAPPATEADEDIFAKCM 159
            M  VLK  K+DP M K YE+ +  LQ VLL+QN AEL+PEPE SA+D GGC GSGD+                  DFM+AGD G  DYEE     HR  SQS                          DPVT S  +V GGKK++QRK KR S+GKLLTA P T+ D++ FA+CM
Sbjct:  117 MNRVLKVAKQDPGMKKLYEKNEERLQGVLLSQNFAELVPEPEASADDRGGCEGSGDDXXXXXXXXXXXXXXXXXXDFMEAGDGGXXDYEEXXXXXHRTTSQSKTKKDKGKKGKGEGKVMGRGKAKVMGDPVTGSTPAVPGGKKSRQRKCKRNSVGKLLTARPTTQDDDERFAECM 291
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9883.17955.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.800e-2845.71protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9883contigEcto-sp9_F_contig9883:452..1160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9883.17955.1mRNA_Ecto-sp9_F_contig9883.17955.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9883 296..1160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9883.17955.1 ID=prot_Ecto-sp9_F_contig9883.17955.1|Name=mRNA_Ecto-sp9_F_contig9883.17955.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=160bp
MKNVLKSVKKDPDMWKRYEEYQGELQTVLLAQNIAELIPEPEPSAEDGGG
CAGSGDEDDADGGDFMDAGDEGGGDYEEVDEEDHRKRSQSKKKTGKKGKG
KGQGKTNGKGRGDPVTASASSVSGGKKNQQRKSKRISLGKLLTAPPATEA
DEDIFAKCM*
back to top