prot_Ecto-sp9_F_contig9877.17948.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9877.17948.1
Unique Nameprot_Ecto-sp9_F_contig9877.17948.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length73
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9877.17948.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH43_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.160e-19
Identity = 48/59 (81.36%), Postives = 50/59 (84.75%), Query Frame = 0 
Query:   14 PSSTNAFATWFRSARSPSPVSEGICRAVRVVSATLSSLVCPCFEKMRDDDXXXSQSERE 72
            PSSTN FATWF  ARSPSP + GICRAVR VSATLSSLVCPCFE+M D  XXXSQSERE
Sbjct:  377 PSSTNPFATWFHFARSPSPATGGICRAVRAVSATLSSLVCPCFERMDDXXXXXSQSERE 435
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BLAST of mRNA_Ecto-sp9_F_contig9877.17948.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B3_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.140e-13
Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = 0 
Query:   17 TNAFATWFRSARSPSPVSEGICRAVRVVSATLSSLVCPCFEKMRD---DDXXXSQSERE 72
            TN F +WFRS RSPSP +  +CRA+R VSATLSSLVCPCFE+M D   DD   S + RE
Sbjct:  184 TNGFVSWFRSPRSPSPGTGRMCRAMRAVSATLSSLVCPCFERMYDYDNDDDGQSDTCRE 242
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9877.17948.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4Q7_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 6.360e-13
Identity = 32/46 (69.57%), Postives = 36/46 (78.26%), Query Frame = 0 
Query:   17 TNAFATWFRSARSPSPVSEGICRAVRVVSATLSSLVCPCFEKMRDD 62
            TN F  WFRS RSPSP +  +CRA+R V ATLSSLVCPCFE+M DD
Sbjct:  183 TNGFMAWFRSPRSPSPATGRMCRAMRAVLATLSSLVCPCFERMYDD 228
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9877.17948.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized2.160e-1981.36protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.140e-1362.71protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.360e-1369.57protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9877contigEcto-sp9_F_contig9877:3616..3834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9877.17948.1mRNA_Ecto-sp9_F_contig9877.17948.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9877 3616..3834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9877.17948.1 ID=prot_Ecto-sp9_F_contig9877.17948.1|Name=mRNA_Ecto-sp9_F_contig9877.17948.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=73bp
GARGGGGGDDAAAPSSTNAFATWFRSARSPSPVSEGICRAVRVVSATLSS
LVCPCFEKMRDDDDDDSQSERE*
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