prot_Ecto-sp9_F_contig987.17944.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig987.17944.1
Unique Nameprot_Ecto-sp9_F_contig987.17944.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length745
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig987.17944.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL5_9PHAE)

HSP 1 Score: 750 bits (1936), Expect = 8.660e-265
Identity = 456/542 (84.13%), Postives = 481/542 (88.75%), Query Frame = 0 
Query:  212 MAPPGDSIIREDTQEPSHLSQGDGIHEQATQQPQPRASDENEMFDQQTHEQSPQRSRREKLQEAEDDNQQHQQKIRGLPGSGEARIDAEEHSDDGVSDYANDDESTSKNGRSGRASVCCAGGDRTGAGATDSSDLVGSSSFEKLDNQATSAFAADEPANRLNEVEDGRAGSGRVDSRSSGAERKGGEGDMEVTEGAEDMGSGEDENLPEEELAVVRDQREREAIIREKVGDGFLKITNSYLTASSAIKGVEAEQARMIKGENEIKEGLTKFSLRVRKATDALQTQLLAALRGEPSGVEEETPLTAELEQRDRVCAGMIGEHHDLESTGHHSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAGTRIVNSSIMRRVKFNCRRPSDSAEGDDGIGRASRRSSSSAIDRLANGMPSRQEQVHVAAGQSDCGSATTSDTMNGMGSTNGTDMGESGLARTHPLHAAAASGCNXXXXXXVS---------SSGIPPAFPHKRPRLDPAPQLAQTREAGATVGPGGWTRPAF 744
            M PPGDS+IR DTQEPSHLS+GD I+EQATQQP PRASDENEMFDQQT EQSP RS RE+LQE EDDNQQHQQ+  GLPGSGEAR+DAEEHSDDGVSDYANDDESTSK+GRSGR S CCAGGDRTGAGATDSSD +GS SFEK DNQATSAFAAD PANRLNE+EDGRA SGRVDSRSSGA+RKGGEGDME TEGA+DM SGED +LPEEELAVVRDQR+REAIIR+KVGDGF KITNSY+TASSAIK VEAEQARM+KGENEIKEGLTKFSLRVRKATDALQTQLLAALRGEPSG EEETPLTAELEQRDRVC GMIGEHHDLESTGHHSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             PLAGTRIV+SS M R+KFNCR+PSDSAE D GIGRASRR SSSAIDRLA+ MPSR+EQVH+AAGQSDCGSATTSDTMNGMGST+GTDM E GLARTH LHA  A GCNXXXXXX           SSGIPPAFPHKRPRL+PAP LAQTR+AGATVGPGGWTRPAF
Sbjct:    1 MEPPGDSVIRVDTQEPSHLSRGDAIYEQATQQPPPRASDENEMFDQQTQEQSPLRSCRERLQEPEDDNQQHQQETCGLPGSGEARLDAEEHSDDGVSDYANDDESTSKSGRSGRTSDCCAGGDRTGAGATDSSDPIGSCSFEKSDNQATSAFAADGPANRLNEMEDGRASSGRVDSRSSGADRKGGEGDMEATEGAKDMSSGEDGSLPEEELAVVRDQRKREAIIRKKVGDGFQKITNSYMTASSAIKEVEAEQARMLKGENEIKEGLTKFSLRVRKATDALQTQLLAALRGEPSGAEEETPLTAELEQRDRVCTGMIGEHHDLESTGHHSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSDATAASGGGGPLAGTRIVDSSTMSRMKFNCRQPSDSAEVDGGIGRASRRISSSAIDRLADRMPSREEQVHLAAGQSDCGSATTSDTMNGMGSTSGTDMEEVGLARTHSLHAEGARGCNXXXXXXXXXXXXXXXXXSSGIPPAFPHKRPRLNPAPTLAQTRDAGATVGPGGWTRPAF 542
[Close]
BLAST of mRNA_Ecto-sp9_F_contig987.17944.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C0_ECTSI)

HSP 1 Score: 514 bits (1325), Expect = 7.810e-175
Identity = 288/332 (86.75%), Postives = 297/332 (89.46%), Query Frame = 0 
Query:  212 MAPPGDSIIREDTQEPSHLSQGDGIHEQATQQPQPRASDENEMFDQQTHEQSPQRSRREKLQEAEDDNQQHQQKIRGLPGSGEARIDAEEHSDDGVSDYANDDESTSKNGRSGRASVCCAGGDRTGAGATDSSDLVGSSSFEKLDNQATSAFAADEPANRLNEVEDGRAGSGRVDSRSSGAERKGGEGDMEVTEGAEDMGSGEDENLPEEELAVVRDQREREAIIREKVGDGFLKITNSYLTASSAIKGVEAEQARMIKGENEIKEGLTKFSLRVRKATDALQTQLLAALRGEPSGVEEETPLTAELEQRDRVCAGMIGEHHDLESTGHHSR 543
            MAPPGDSIIREDTQEPSHLSQGD I+EQATQQP PRA                   RRE+LQE EDDNQQHQQ+I GLPGSGEAR+DAEEHSDDG SDYANDDESTSKNGRSGRAS CCAGGDRTGAGATDSSD +GSSSFEK DNQATSAFAA EPAN LNEVEDGRA S  VDSRSSGA+RKGGEGDMEVTEGAEDMGSGEDENLPEEELAVVRDQREREAIIREKVGDGFLKIT+SY TASSAIKGV+AEQARM+KGENEIKEGLTKFSLRVRKATDALQTQLLAALRGEPSG EEETPLTAELEQRDRVC GMIGEHHDLESTGHHSR
Sbjct:    1 MAPPGDSIIREDTQEPSHLSQGDDINEQATQQPPPRAXXXXXXXXXXXXXXXXXXXRRERLQEPEDDNQQHQQEICGLPGSGEARLDAEEHSDDGASDYANDDESTSKNGRSGRASGCCAGGDRTGAGATDSSDPIGSSSFEKPDNQATSAFAAKEPANCLNEVEDGRASSAGVDSRSSGADRKGGEGDMEVTEGAEDMGSGEDENLPEEELAVVRDQREREAIIREKVGDGFLKITDSYTTASSAIKGVKAEQARMLKGENEIKEGLTKFSLRVRKATDALQTQLLAALRGEPSGAEEETPLTAELEQRDRVCTGMIGEHHDLESTGHHSR 332
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig987.17944.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized8.660e-26584.13protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized7.810e-17586.75protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 265..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig987contigEcto-sp9_F_contig987:15184..18513 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig987.17944.1mRNA_Ecto-sp9_F_contig987.17944.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig987 15184..18513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig987.17944.1 ID=prot_Ecto-sp9_F_contig987.17944.1|Name=mRNA_Ecto-sp9_F_contig987.17944.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=745bp
MTDYCAPLRHHAAGPPPNPSGALGSFVGGDHGGNPGGTNPLHPSQRSASE
GPPGRTLGGNHDFHSRLCAEKDESQGSDREECAETRHEFFNGGYTGTESE
DERESAEVGEGNLRDHSAGYSRFEQEEEETTVDGGEEQHEREQSMNPGVT
GRSNGDATGGGSSSNGGSSASSSLKSHQLRAPQHPEQAEEAKRQQQQQEP
RAVEGARARGPMAPPGDSIIREDTQEPSHLSQGDGIHEQATQQPQPRASD
ENEMFDQQTHEQSPQRSRREKLQEAEDDNQQHQQKIRGLPGSGEARIDAE
EHSDDGVSDYANDDESTSKNGRSGRASVCCAGGDRTGAGATDSSDLVGSS
SFEKLDNQATSAFAADEPANRLNEVEDGRAGSGRVDSRSSGAERKGGEGD
MEVTEGAEDMGSGEDENLPEEELAVVRDQREREAIIREKVGDGFLKITNS
YLTASSAIKGVEAEQARMIKGENEIKEGLTKFSLRVRKATDALQTQLLAA
LRGEPSGVEEETPLTAELEQRDRVCAGMIGEHHDLESTGHHSREESAASA
SSTKPPAIVNQGERRAALSLSSRRATSGATAAGGGGGPLAGTRIVNSSIM
RRVKFNCRRPSDSAEGDDGIGRASRRSSSSAIDRLANGMPSRQEQVHVAA
GQSDCGSATTSDTMNGMGSTNGTDMGESGLARTHPLHAAAASGCNGGGGG
GVSSSGIPPAFPHKRPRLDPAPQLAQTREAGATVGPGGWTRPAF*
back to top