prot_Ecto-sp9_F_contig986.17937.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig986.17937.1
Unique Nameprot_Ecto-sp9_F_contig986.17937.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length206
Homology
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BLAST of mRNA_Ecto-sp9_F_contig986.17937.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN7_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 9.670e-120
Identity = 178/205 (86.83%), Postives = 180/205 (87.80%), Query Frame = 0 
Query:    1 MFSCRLMKVNGVLLPEVLGALGGEGQLVGWKVHLRHGSQEHRAQFTALPSSKNNSATPSLSEPRRTDLVTISGSPSKEEVEFEDKGVEEKVEVAVLFDLIAREMPKRQLFRHSMASIDLDAFRAQPEKRDACVANEKVNRRGIRSTPRPRVELWLPLQPVNSGNDLRDYGSIQISIMYSDDCVTQGYMFGLFCGLTLPRLSIHPS 205
            MFSCRLMKVNGVLLPEVLGALGGEGQLV WKVHLRHGSQEHRAQFTALPSSKNNS TPSLSEPRRTDLVTISGSPS EEVEFEDKGV EKVEVAVLFDLIAREMPKRQLFRHS+ASIDLDAFRAQPEK                     RVELWLPLQPVNSGNDLRDYGSIQISIMY+DDCVTQGYMFGLFCGLTLPRLSIHPS
Sbjct:    1 MFSCRLMKVNGVLLPEVLGALGGEGQLVAWKVHLRHGSQEHRAQFTALPSSKNNSTTPSLSEPRRTDLVTISGSPSNEEVEFEDKGVGEKVEVAVLFDLIAREMPKRQLFRHSIASIDLDAFRAQPEK---------------------RVELWLPLQPVNSGNDLRDYGSIQISIMYTDDCVTQGYMFGLFCGLTLPRLSIHPS 184
[Close]
BLAST of mRNA_Ecto-sp9_F_contig986.17937.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD5_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.240e-5
Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 0 
Query:  143 IRSTPRPRVELWLPLQPVNSGNDLRD-YGSIQISIMY-SDDCVTQGYMFGLFCGL 195
             R  P  R  LW+PL+PV S   L D +G+++I+  Y S DCV QGY+F LFCGL
Sbjct:    4 FRQQPDLRTTLWVPLRPVAS--HLEDPFGAVKIAATYHSKDCVPQGYLFALFCGL 56
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig986.17937.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized9.670e-12086.83protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.240e-550.91protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig986contigEcto-sp9_F_contig986:885..5773 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig986.17937.1mRNA_Ecto-sp9_F_contig986.17937.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig986 74..6904 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig986.17937.1 ID=prot_Ecto-sp9_F_contig986.17937.1|Name=mRNA_Ecto-sp9_F_contig986.17937.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=206bp
MFSCRLMKVNGVLLPEVLGALGGEGQLVGWKVHLRHGSQEHRAQFTALPS
SKNNSATPSLSEPRRTDLVTISGSPSKEEVEFEDKGVEEKVEVAVLFDLI
AREMPKRQLFRHSMASIDLDAFRAQPEKRDACVANEKVNRRGIRSTPRPR
VELWLPLQPVNSGNDLRDYGSIQISIMYSDDCVTQGYMFGLFCGLTLPRL
SIHPS*
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