prot_Ecto-sp9_F_contig9847.17928.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9847.17928.1
Unique Nameprot_Ecto-sp9_F_contig9847.17928.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length90
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9847.17928.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK34_9PHAE)

HSP 1 Score: 177 bits (448), Expect = 1.330e-49
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0 
Query:    3 EEEKRVEDRSVKCETPGCDSGQYALGVCCACFDRHRERIAAIRTAAKKKRQLQEKNPPPCRACEGLLSETQHAECVRTANGTNSGDEN 90
            EEEKRVED+SVKCETPGCDSGQYALGVCCACFDRHRERIAAIRTAAKKKRQLQEKNPPPCRACEGLLSETQHAECVRTANGT SGDEN
Sbjct:  798 EEEKRVEDKSVKCETPGCDSGQYALGVCCACFDRHRERIAAIRTAAKKKRQLQEKNPPPCRACEGLLSETQHAECVRTANGTYSGDEN 885
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BLAST of mRNA_Ecto-sp9_F_contig9847.17928.1 vs.
Match: PHD-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX1_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 1.420e-47
Identity = 87/103 (84.47%), Postives = 89/103 (86.41%), Query Frame = 0 
Query:    1 MEEEEKRVEDRSVKCETPGCDSGQYALGVCCACFDRHRERIAAIRTAAKKKRQLQEKNPPPCRACE-------------GLLSETQHAECVRTANGTNSGDEN 90
            MEEEEKRVED+SVKCETPGCDSGQYALGVCCACFDRHRERIAAIRTAAKKKRQLQEKNPPPCRACE             GLLSETQHAECVR ANGTNSGD+N
Sbjct:  512 MEEEEKRVEDKSVKCETPGCDSGQYALGVCCACFDRHRERIAAIRTAAKKKRQLQEKNPPPCRACEEASTSTNAVPSLQGLLSETQHAECVRIANGTNSGDDN 614
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9847.17928.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.330e-4997.73protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
PHD-type1.420e-4784.47domain-containing protein n=1 Tax=Ectocarpus silic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9847contigEcto-sp9_F_contig9847:2673..4313 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9847.17928.1mRNA_Ecto-sp9_F_contig9847.17928.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9847 2673..4313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9847.17928.1 ID=prot_Ecto-sp9_F_contig9847.17928.1|Name=mRNA_Ecto-sp9_F_contig9847.17928.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=90bp
MEEEEKRVEDRSVKCETPGCDSGQYALGVCCACFDRHRERIAAIRTAAKK
KRQLQEKNPPPCRACEGLLSETQHAECVRTANGTNSGDEN
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