prot_Ecto-sp9_F_contig9833.17918.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9833.17918.1
Unique Nameprot_Ecto-sp9_F_contig9833.17918.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length149
Homology
BLAST of mRNA_Ecto-sp9_F_contig9833.17918.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9D2_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 6.250e-87
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 0
Query:    1 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYEKYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLNWVKKIQPGAETLNPSSSTQIQ 143
            MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYE YYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFL+WVKKIQPGAETLNPSSSTQIQ
Sbjct:  920 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYEMYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLSWVKKIQPGAETLNPSSSTQIQ 1062          
BLAST of mRNA_Ecto-sp9_F_contig9833.17918.1 vs.
Match: Pol1-like (DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ5_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 4.190e-85
Identity = 139/143 (97.20%), Postives = 140/143 (97.90%), Query Frame = 0
Query:    1 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYEKYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLNWVKKIQPGAETLNPSSSTQIQ 143
            MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREM WKDGMTMLDFYE YYVPFGELLTDMERTGIYVEAK YL+DIEVQARNDKKKAEETFLNWVKKIQPGAETLNPSSSTQIQ
Sbjct:  790 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMSWKDGMTMLDFYEMYYVPFGELLTDMERTGIYVEAKDYLQDIEVQARNDKKKAEETFLNWVKKIQPGAETLNPSSSTQIQ 932          
BLAST of mRNA_Ecto-sp9_F_contig9833.17918.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L3E5_9EUKA)

HSP 1 Score: 166 bits (421), Expect = 2.010e-49
Identity = 80/143 (55.94%), Postives = 103/143 (72.03%), Query Frame = 0
Query:    1 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYEKYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLNWVKKIQPGAETLNPSSSTQIQ 143
            MKE+FG+PKLKKDGTPG  ++LPP+D++QT P  RP +I YS YDAQ TWL+++EL  +L+ MPW+DG+ M  FYEKY+ PFGELLTDMER G++V+A   L   +VQA  D+ KAE  F  W     P A  +N  SS+QIQ
Sbjct:   35 MKEIFGVPKLKKDGTPGKTVLLPPVDKLQTSPLTRPDWIRYSVYDAQGTWLLYQELKSRLQAMPWQDGLDMYHFYEKYWRPFGELLTDMERAGVHVDAATKLPAAQVQAMADRDKAELVFRRWASGYCPQAWYMNIGSSSQIQ 177          
BLAST of mRNA_Ecto-sp9_F_contig9833.17918.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XY06_9STRA)

HSP 1 Score: 166 bits (421), Expect = 3.190e-47
Identity = 81/150 (54.00%), Postives = 109/150 (72.67%), Query Frame = 0
Query:    1 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWK-------DGMTMLDFYEKYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLNWVKKIQPGAETLNPSSSTQIQ 143
            MKE+FG+ KLKKDGTPG+L V+PP+ ++Q RPE R ++I+YSAYDA+ TWL+  +L   LR+M W+       +  TM DFY+ YYVPFGELLTDMER GI+VEA+ YL +++V A  D+KKA  TF +W   + P    +NP+SSTQ+Q
Sbjct:  200 MKEIFGVAKLKKDGTPGSLKVVPPVRDLQFRPEHRRKWIKYSAYDAEGTWLLRDKLEGLLRQMSWEPVGRPQEEEHTMWDFYQMYYVPFGELLTDMERNGIHVEAETYLAEVQVTAEADRKKALRTFRDWAASVNPNGRFINPASSTQLQ 349          
BLAST of mRNA_Ecto-sp9_F_contig9833.17918.1 vs.
Match: Plastid-targeted (DNA polymerase n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A510EYA4_BIGNA)

HSP 1 Score: 162 bits (411), Expect = 1.440e-43
Identity = 83/144 (57.64%), Postives = 102/144 (70.83%), Query Frame = 0
Query:    1 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYEKYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLNW-VKKIQPGAETLNPSSSTQIQ 143
            M E+FGIPKLKKDGTPG +L LP ++E+Q+ P    ++IEYSAYDA+ TWL+HREL  KL  MPW+ G+TM DFY  Y VPFGELLTDMER GIYV+   +LK+ E  AR + + AEETF  W V+ +      LNP S  QIQ
Sbjct:  573 MIEIFGIPKLKKDGTPGKILELPAVEELQSNPNTSAQWIEYSAYDAEGTWLLHRELTTKLLAMPWEKGLTMYDFYTSYLVPFGELLTDMERNGIYVDTS-FLKEAEKTARAEIQNAEETFHKWAVRMVGDVGWLLNPQSGPQIQ 715          
BLAST of mRNA_Ecto-sp9_F_contig9833.17918.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NPQ0_9EUKA)

HSP 1 Score: 158 bits (399), Expect = 4.700e-42
Identity = 76/143 (53.15%), Postives = 99/143 (69.23%), Query Frame = 0
Query:    1 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYEKYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLNWVKKIQPGAETLNPSSSTQIQ 143
            MKE+FG+PKLKKDGTPG  ++LPP++++QT P  RP +I YS YDAQ TWL++  L  +L +MPW+DG+ M  FYE+Y+ PFGELLTDME  G++V+A   L   EVQA  D+ +AE  F  W     P A  +N  SS QIQ
Sbjct:  187 MKEIFGMPKLKKDGTPGKTILLPPVEQLQTSPLTRPDWIRYSVYDAQGTWLLYEALKARLEKMPWQDGLNMHHFYERYWRPFGELLTDMEAAGVHVDAAHKLPAAEVQAIADRDRAELVFRRWAASYCPEAWYMNVGSSAQIQ 329          
BLAST of mRNA_Ecto-sp9_F_contig9833.17918.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K508_CAFRO)

HSP 1 Score: 149 bits (377), Expect = 2.880e-40
Identity = 72/141 (51.06%), Postives = 93/141 (65.96%), Query Frame = 0
Query:    1 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYEKYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLNWVKKIQPGAETLNPSSSTQ 141
            MKE F +PKLKKDGTPG   +LPP+DEIQ  P +R  +I+YS YDA+ATW +   L  KLRE PW  G++MLDFYE+Y VPF  +LTDMER GI V+ K +L   ++ A  ++  A E FL W ++  P A  +N  S  Q
Sbjct:   64 MKERFAVPKLKKDGTPGKDTLLPPVDEIQLDPAMRAEWIDYSTYDAEATWRLREVLADKLRERPWAQGLSMLDFYERYIVPFAVVLTDMEREGIRVDVKEHLPRAQMLAEEERATATEEFLQWAEQYMPEARRMNTGSDPQ 204          
BLAST of mRNA_Ecto-sp9_F_contig9833.17918.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVQ1_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.100e-40
Identity = 72/144 (50.00%), Postives = 94/144 (65.28%), Query Frame = 0
Query:    1 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYEKYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLNWVKK-IQPGAETLNPSSSTQIQ 143
            MKELFG P+L+KDGT G+++ +PP++ +Q  P  R  +I YSAYDA+ TW +H EL  +LR M W DG  + D+Y  Y   F E+LTDMER GI V+A+ YL  +EVQAR D+      F  W KK I P    LNP+SS Q+Q
Sbjct:   20 MKELFGEPRLRKDGTEGSIVDVPPVERMQRDPRHRRGWIMYSAYDAEGTWKIHDELRGRLRNMAWVDGQNLYDYYSLYMAEFAEVLTDMERRGIRVDARDYLAGVEVQAREDRAVHAAKFREWAKKQIGPDGLALNPASSIQLQ 163          
BLAST of mRNA_Ecto-sp9_F_contig9833.17918.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YAI0_9STRA)

HSP 1 Score: 142 bits (357), Expect = 8.540e-40
Identity = 68/143 (47.55%), Postives = 98/143 (68.53%), Query Frame = 0
Query:    1 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYEKYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLNWV-KKIQPGAETLNPSSSTQI 142
            MKELFGIP+L+KDGT G ++ +PP++ +Q  P+ R +FI YS YDA+ TWL+  +L   L +MPW  G  +  +Y++Y   FG++LTDMER G+ V+AK YL  +EVQAR D+ + E+ F  W  ++I      LNP+SSTQ+
Sbjct:   40 MKELFGIPRLRKDGTEGAIVDVPPVEVMQRDPKHRAKFIRYSCYDAEGTWLIREQLQLLLEKMPWIGGENLWQYYQRYLCAFGDVLTDMERRGVRVDAKDYLAQVEVQARKDRVEHEKKFREWAHQQIGIDGLALNPASSTQL 182          
BLAST of mRNA_Ecto-sp9_F_contig9833.17918.1 vs.
Match: POLAc (domain-containing protein n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8CVM6_CAFRO)

HSP 1 Score: 149 bits (377), Expect = 4.360e-39
Identity = 72/141 (51.06%), Postives = 93/141 (65.96%), Query Frame = 0
Query:    1 MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATWLVHRELMQKLREMPWKDGMTMLDFYEKYYVPFGELLTDMERTGIYVEAKGYLKDIEVQARNDKKKAEETFLNWVKKIQPGAETLNPSSSTQ 141
            MKE F +PKLKKDGTPG   +LPP+DEIQ  P +R  +I+YS YDA+ATW +   L  KLRE PW  G++MLDFYE+Y VPF  +LTDMER GI V+ K +L   ++ A  ++  A E FL W ++  P A  +N  S  Q
Sbjct:  151 MKERFAVPKLKKDGTPGKDTLLPPVDEIQLDPAMRAEWIDYSTYDAEATWRLREVLADKLRERPWAQGLSMLDFYERYIVPFAVVLTDMEREGIRVDVKEHLPRAQMLAEEERATATEEFLQWAEQYMPEARRMNTGSDPQ 291          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9833.17918.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.250e-8798.60protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Pol1-like4.190e-8597.20DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
Hypothetical2.010e-4955.94protein (Fragment) n=1 Tax=Coccolithus braarudii T... [more]
Hypothetical3.190e-4754.00protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=... [more]
Plastid-targeted1.440e-4357.64DNA polymerase n=1 Tax=Bigelowiella natans TaxID=2... [more]
Hypothetical4.700e-4253.15protein (Fragment) n=2 Tax=Calcidiscus leptoporus ... [more]
Hypothetical2.880e-4051.06protein (Fragment) n=1 Tax=Cafeteria roenbergensis... [more]
Hypothetical3.100e-4050.00protein (Fragment) n=1 Tax=Pseudictyota dubia TaxI... [more]
Hypothetical8.540e-4047.55protein (Fragment) n=1 Tax=Grammatophora oceanica ... [more]
POLAc4.360e-3951.06domain-containing protein n=5 Tax=Sar TaxID=269873... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 2..91
e-value: 1.4E-6
score: 30.2
NoneNo IPR availablePANTHERPTHR10133:SF41MITOCHONDRIAL DNA POLYMERASE Acoord: 5..143
IPR002298DNA polymerase APANTHERPTHR10133DNA POLYMERASE Icoord: 5..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9833contigEcto-sp9_F_contig9833:2018..3401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9833.17918.1mRNA_Ecto-sp9_F_contig9833.17918.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9833 2018..3401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9833.17918.1 ID=prot_Ecto-sp9_F_contig9833.17918.1|Name=mRNA_Ecto-sp9_F_contig9833.17918.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=149bp
MKELFGIPKLKKDGTPGNLLVLPPIDEIQTRPEVRPRFIEYSAYDAQATW
LVHRELMQKLREMPWKDGMTMLDFYEKYYVPFGELLTDMERTGIYVEAKG
YLKDIEVQARNDKKKAEETFLNWVKKIQPGAETLNPSSSTQIQVCGQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR002298DNA_polymerase_A