prot_Ecto-sp9_F_contig9819.17906.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9819.17906.1
Unique Nameprot_Ecto-sp9_F_contig9819.17906.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length474
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9819.17906.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF2_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 1.170e-116
Identity = 276/372 (74.19%), Postives = 282/372 (75.81%), Query Frame = 0 
Query:   39 MEPPLVGEPGAAXXXXXXXXXXXXXGFGTADDVRHGGKNPXXXXXXXXXXXXXXXXXXXNLRMSRRESSSSWKETRRRAPPLQQPGREPHQETGNRNSFRRLREDPVEEEDLQQQLLGTNSRSLPEARERGHLQRDPYATPRGDGRLGRGAHGDRWHHLPDRERQHPRDEED-GPGGELESERSVSGAGGGDGSLSRTGGARDDGAGSGSRGKGGFREAPLTSTPLRKHXXXXXXXXXXPQPPGFVVHAEAVFKWMGVEGLTPEVLRRAKRGLREEAVAAKMWGALLRVALLHLDATRRXXXXXXXXXXXXXXXXXXXXXXXXADAPERLETIPDTPAAAATRYPAGGSFSGPVPXXXXXXXXPRSKHDGAR 409
            MEPPLVGEPGAA           X G GTA D+  GGKN  XXXXXXXXXXXXXXXXXX   +SRRESSS+ KETRRR PPLQ PGRE  QE  NRNSFR LREDP  EE+  QQ L TNSRSLPE RERGHLQRD Y TPRGDG LGRGAHGDRW HL  RE+QHPRDEED GPGGELE ER VSGAG GDGSLSRT GA  D AGSG RGKGGFREAPLTS  LRK  XXXXXXXXX  P GFVVHAE VFKWMGVEGLTPEVLRRAKRGLREEAVA KMW ALLRVALLHLDATRR          XXXXXXXXXX     DAP R ETIPDTPAA ATR PAGGS SGPVP        PRS +DGAR
Sbjct:    1 MEPPLVGEPGAAPGGGGRGGRRPXPGLGTAADMHDGGKN-LXXXXXXXXXXXXXXXXXXXXXLSRRESSSASKETRRRNPPLQ-PGREAQQEIVNRNSFRPLREDP--EEEKLQQFLRTNSRSLPEDRERGHLQRDSYPTPRGDGGLGRGAHGDRWQHLSGREQQHPRDEEDDGPGGELELERRVSGAGCGDGSLSRTAGAWGDRAGSGDRGKGGFREAPLTSMLLRKQHXXXXXXXXXXXP-GFVVHAEEVFKWMGVEGLTPEVLRRAKRGLREEAVAGKMWRALLRVALLHLDATRRRGEAPAAALAXXXXXXXXXX-----DAPGRPETIPDTPAATATRPPAGGSSSGPVPVPVSASVPPRSNYDGAR 362
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BLAST of mRNA_Ecto-sp9_F_contig9819.17906.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T0_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 1.150e-15
Identity = 73/92 (79.35%), Postives = 74/92 (80.43%), Query Frame = 0 
Query:  319 MWGALLRVALLHLDATRRXXXXXXXXXXXXXXXXXXXXXXXXADAPERLETIPDTPAAAATRYPAGGSFSGPVPXXXXXXXXPRSKHDGARY 410
            MW ALLRVALLHLDA R XXXXXXXXXXXXXXXXXXXX    ADAP R ETIP+TPAAAATR PAGGSFSGPVP        PRSKHDGARY
Sbjct:    1 MWRALLRVALLHLDAARXXXXXXXXXXXXXXXXXXXXX----ADAPGRPETIPNTPAAAATRSPAGGSFSGPVPVPVSAAAPPRSKHDGARY 88
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9819.17906.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.170e-11674.19protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.150e-1579.35protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9819contigEcto-sp9_F_contig9819:595..4059 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9819.17906.1mRNA_Ecto-sp9_F_contig9819.17906.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9819 595..4059 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9819.17906.1 ID=prot_Ecto-sp9_F_contig9819.17906.1|Name=mRNA_Ecto-sp9_F_contig9819.17906.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=474bp
MASRERAAAAAAASGKGRGRETRGRGGRDARSARGAWVMEPPLVGEPGAA
AGGGGRGGRRPPPGFGTADDVRHGGKNPSRRDMLDLGTAEDIRGGGSNLR
MSRRESSSSWKETRRRAPPLQQPGREPHQETGNRNSFRRLREDPVEEEDL
QQQLLGTNSRSLPEARERGHLQRDPYATPRGDGRLGRGAHGDRWHHLPDR
ERQHPRDEEDGPGGELESERSVSGAGGGDGSLSRTGGARDDGAGSGSRGK
GGFREAPLTSTPLRKHHHHHHHQQKQPQPPGFVVHAEAVFKWMGVEGLTP
EVLRRAKRGLREEAVAAKMWGALLRVALLHLDATRRRREAPAAALASPTT
AAAAAAAAAAADAPERLETIPDTPAAAATRYPAGGSFSGPVPVPVSAAAP
PRSKHDGARYRGRIPVGVGGGGGGGRPRQGWGRPQRCPCPWRWKRAGICC
RCGDTGGRLSSKESRLAMCYRHER
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