prot_Ecto-sp9_F_contig9812.17901.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9812.17901.1
Unique Nameprot_Ecto-sp9_F_contig9812.17901.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length316
Homology
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: DEAD/DEAH (box helicase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG5_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 4.460e-130
Identity = 224/259 (86.49%), Postives = 232/259 (89.58%), Query Frame = 0
Query:   56 MGGDDGLQSAGAPSESRRLELRFPQKNTAGTGKAKVSKRLQLVHGGTSDSAAAAVDWREDRDQRARSGGALNPSAKGKRRSGAGGAGSEGGGKEDEGPPGAEDGAAE-LRFDPLRTLEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 313
            MGG+DGLQSAG P ESRRLELRFPQKNTA               GGTSD AAAAV WRE+RDQRARSGGALNPSAKGKR  G G AGSEGGGK+DEGPPGAE+GAAE LRFDPLR LEYLKSLPIYEDQAVYSETLPGR+GEYEDTLRPLH E+KAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVI+AIVG RPDAVALYLFPTKALAQDQLRSLKELVGASPYLS+RVRPMTLDGDTPFRE
Sbjct:    1 MGGNDGLQSAGPPCESRRLELRFPQKNTA--------------DGGTSDRAAAAVGWRENRDQRARSGGALNPSAKGKRPRGEGRAGSEGGGKQDEGPPGAEEGAAEKLRFDPLRALEYLKSLPIYEDQAVYSETLPGRSGEYEDTLRPLHPELKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIDAIVGPRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSQRVRPMTLDGDTPFRE 245          
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP27_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 3.540e-110
Identity = 240/429 (55.94%), Postives = 241/429 (56.18%), Query Frame = 0
Query:   56 MGGDDGLQSAGAPSESRRLELRFPQKNTAGTGKAKVSKRLQLVH----------------------------------------------------------------------------------------------------------------------GG----------------------------------------------------TSDSAAAAVDWREDRDQRARSGGALNPSAKGKRRSGAGGAGSEGGGKEDEGPPGAEDGAAE-LRFDPLRTLEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 313
            MGGDDGLQSA APSESRRLELRF QKNTAGTGKAKVSKRLQLV                                                                                                                       GG                                                    TSDSAA A DWRE+ DQRARSGGALN SAKGKR  GAGG GSEGGGKE EGPPGAEDGAAE LRFDPLR LEYLKSLPIYEDQAVYSETLPGRAGEYEDT RPLH EVKAALERSKGV RLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVG RPDAVALYLFPTKALAQDQLRSLK LVGASPYLSERVRPMTLDGDTPFRE
Sbjct:    1 MGGDDGLQSARAPSESRRLELRFLQKNTAGTGKAKVSKRLQLVRQAMLDHAEGRTRRLPDGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTAAVTALGCDQGSRSANNGSGSXXXXXXXXXXXXXXXXXXXXXXXXGEFCGKGGKRGARTSAPGGNHHDRASRAGVDSRGKRPPATGTALSLLAPLSDSPAYTTVCGXXXXXXXXXXTSDSAAQAADWRENHDQRARSGGALNRSAKGKRPRGAGGTGSEGGGKEVEGPPGAEDGAAEKLRFDPLRALEYLKSLPIYEDQAVYSETLPGRAGEYEDTKRPLHPEVKAALERSKGVARLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGPRPDAVALYLFPTKALAQDQLRSLKGLVGASPYLSERVRPMTLDGDTPFRE 429          
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFF7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.320e-36
Identity = 80/137 (58.39%), Postives = 98/137 (71.53%), Query Frame = 0
Query:  175 KSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKA----ALERSKGVTRLFKHQALAIDAAAA-GRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLD 306
            K LP Y DQ ++ ETLP RAGE+ + L  L  E+      AL++SKG++RLF+HQA AIDAA   G HVALST TSSGKSV FNV V+  +V  +PDAVA+YLFPTKALAQDQL S + L+G SP L   V P+T+D
Sbjct:    1 KGLPFYRDQVMHVETLPPRAGEFVE-LSDLAVEIAPCVLEALQKSKGISRLFRHQADAIDAAVGHGMHVALSTGTSSGKSVAFNVPVLHRLV-EQPDAVAIYLFPTKALAQDQLGSFQGLIGGSPALESSVLPLTVD 135          
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Uncharacterized (protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TYE6_SALR5)

HSP 1 Score: 129 bits (323), Expect = 1.900e-29
Identity = 72/149 (48.32%), Postives = 101/149 (67.79%), Query Frame = 0
Query:  164 RFDPLRTLEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFR 312
            +FDP   L++L  LP+ +  +++ ETLP RA  + +  RPL + ++  L    G+ RLF HQA  ++AA  G HV +STATSSGKS+V+++  +EA++    + VALY+FPTKALAQDQLRSL+E VGA  +L + VR   LD DTP R
Sbjct:  254 QFDPKEILDHLLRLPLAKGHSLHVETLPARAPVFGELERPLPSPLQHTLA-DLGIQRLFSHQAEGVNAARDGAHVMISTATSSGKSLVYHLPTMEALLSDPHNTVALYIFPTKALAQDQLRSLREFVGAG-WLGDAVRADCLDADTPAR 400          
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Probable (ATP-dependent helicase hrq1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S2L8_9CHLO)

HSP 1 Score: 127 bits (320), Expect = 5.020e-29
Identity = 72/145 (49.66%), Postives = 103/145 (71.03%), Query Frame = 0
Query:  167 PLRTLEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTL-DGDTP 310
            P   L +L+++  Y+DQ V++E +P RA +Y +   PL + V+AAL  ++GVT LF HQA AIDAA AG+HV + T+T+SGKS+ +N+ ++EA+V   P A ALY+FPTKALAQDQLR+LKEL  A+    ++   + + DGDTP
Sbjct:  605 PEAFLAHLRTVSWYKDQIVHTEQIPARAAQYSEPAAPLSSPVRAALS-ARGVTHLFTHQAQAIDAARAGKHVVVCTSTASGKSLCYNLPILEALVRD-PQATALYMFPTKALAQDQLRALKELCAAA--FGDKAPCIDIYDGDTP 745          
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Uncharacterized (protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYB9_CAFRO)

HSP 1 Score: 120 bits (302), Expect = 9.830e-27
Identity = 71/159 (44.65%), Postives = 103/159 (64.78%), Query Frame = 0
Query:  152 GPPGAEDGAAELRFDPLRTLEYLKSL-PIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDT 309
            GP   +    EL   P+ +     SL P Y DQ  +  T+  R  ++ D  RP+H  ++ A+  ++G+T+ F+HQ+LAIDAA AG+HV +ST+TSSGKS+VF+V V + ++  R  AVA+ +FPTKALAQDQLR+++E    S  L+  VR  TLDGD+
Sbjct:  192 GPSKPDLSMVELTLRPVGSSMQRSSLRPWYVDQLRHVHTILPRPAKFRDVERPVHPAIRMAMH-ARGITKFFEHQSLAIDAALAGKHVVISTSTSSGKSLVFSVPVFDRLLRDRA-AVAILIFPTKALAQDQLRAVREFCRGSATLASAVRAATLDGDS 348          
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Helicase (ATP-binding domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A497AP77_9CHLR)

HSP 1 Score: 112 bits (279), Expect = 3.230e-26
Identity = 70/143 (48.95%), Postives = 92/143 (64.34%), Query Frame = 0
Query:  171 LEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVG---TRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTP 310
            LEYLK+ P Y  Q V+ E +P R   Y +  RPL   ++ AL+R+ G+  L+ HQA AI+A   G +V ++T T+SGK++V+N+ V+EAI+G   TR    A YLFPTKALAQDQLRSL ELV         +R  T DGDTP
Sbjct:    8 LEYLKAAPFYRGQIVHVERIPARKARYGELERPLPEPLQQALKRA-GIRGLYTHQADAINAIRRGENVIVATGTASGKTLVYNIPVLEAILGDWRTR----AFYLFPTKALAQDQLRSLGELVNNG---LPSIRYGTYDGDTP 142          
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: DEAD/DEAH (box helicase (Fragment) n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C7L1I0_9BACT)

HSP 1 Score: 111 bits (278), Expect = 7.910e-26
Identity = 67/143 (46.85%), Postives = 90/143 (62.94%), Query Frame = 0
Query:  171 LEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 313
            L  LKS   Y  Q  + E LP R   Y +    +H  V+ AL+R+ G+ RL++HQA AI A  AG+HVA+ T  SSGK++ +N+ V+EA++ T+ +  ALY+FPTKALAQDQLR L+EL      L E +   T DGDTP  E
Sbjct:   10 LRELKSQDWYRGQITHIEVLPARGAIYSEPQIAIHHRVRTALQRA-GIQRLYQHQADAIAAIRAGKHVAIITGASSGKTLCYNIPVLEALL-TQREMRALYIFPTKALAQDQLRKLREL-----GLFEHIIAWTYDGDTPVSE 145          
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: Uncharacterized (protein n=1 Tax=Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 TaxID=1973912 RepID=A0A2M7KNY8_9BACT)

HSP 1 Score: 117 bits (293), Expect = 1.430e-25
Identity = 71/151 (47.02%), Postives = 93/151 (61.59%), Query Frame = 0
Query:  163 LRFDPLRTLEYLKSLPIYEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTPFRE 313
            +  D    +E LK+ P Y  Q V+ E LPGR  +Y +   PLH  +  AL R +G+ RL++HQ  A+  A AGRHV + TAT+SGK++ +N  VIEAI+  R    ALYLFPTKALAQDQLR L EL      L   ++  T DGDTP ++
Sbjct:    1 MPLDCANLVEELKAAPDYNGQIVHHEILPGRRAKYAELDPPLHPSLAEALGR-QGIKRLYQHQVEALTLARAGRHVMVVTATASGKTLCYNAPVIEAILADRGTR-ALYLFPTKALAQDQLRKLNEL-----DLFPTLKAATYDGDTPAKD 144          
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Match: DEAD/DEAH (box helicase (Fragment) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7V2CKQ6_9BACT)

HSP 1 Score: 114 bits (284), Expect = 1.970e-25
Identity = 65/131 (49.62%), Postives = 86/131 (65.65%), Query Frame = 0
Query:  180 YEDQAVYSETLPGRAGEYEDTLRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSVVFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERVRPMTLDGDTP 310
            Y  Q    E LP R   Y     PLH  ++  L R++G+  L+ HQA AIDA AAGR+V + T T+SGK++ +N+ V+++++ + P+A ALYLFPTKALAQDQL +LK L  A   LS  VRP T DGDTP
Sbjct:   16 YRGQIAAVEELPARPARYAPPQTPLHPVLRQML-RAEGIEELYLHQARAIDALAAGRNVVVVTGTASGKTMCYNLPVLQSLLES-PEARALYLFPTKALAQDQLGTLKRLAAADLILSGTVRPATYDGDTP 144          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9812.17901.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
DEAD/DEAH4.460e-13086.49box helicase domain-containing protein n=1 Tax=Ect... [more]
Uncharacterized3.540e-11055.94protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical2.320e-3658.39protein (Fragment) n=1 Tax=Rhizochromulina marina ... [more]
Uncharacterized1.900e-2948.32protein n=1 Tax=Salpingoeca rosetta (strain ATCC 5... [more]
Probable5.020e-2949.66ATP-dependent helicase hrq1 n=1 Tax=Coccomyxa sp. ... [more]
Uncharacterized9.830e-2744.65protein n=3 Tax=Cafeteria roenbergensis TaxID=3365... [more]
Helicase3.230e-2648.95ATP-binding domain-containing protein (Fragment) n... [more]
DEAD/DEAH7.910e-2646.85box helicase (Fragment) n=1 Tax=Armatimonadetes ba... [more]
Uncharacterized1.430e-2547.02protein n=1 Tax=Armatimonadetes bacterium CG_4_8_1... [more]
DEAD/DEAH1.970e-2549.62box helicase (Fragment) n=1 Tax=Phycisphaerae bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 179..315
e-value: 8.8E-18
score: 66.3
NoneNo IPR availablePANTHERPTHR24031:SF643coord: 186..297
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 186..297
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 223..291
e-value: 1.5E-10
score: 41.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 203..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9812contigEcto-sp9_F_contig9812:465..4254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9812.17901.1mRNA_Ecto-sp9_F_contig9812.17901.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9812 465..4254 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9812.17901.1 ID=prot_Ecto-sp9_F_contig9812.17901.1|Name=mRNA_Ecto-sp9_F_contig9812.17901.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=316bp
RPHAHAHTQSLVWRLFPGRFGDEASFLPRLRELAGVARAVLVLEEPPESG
GDVDTMGGDDGLQSAGAPSESRRLELRFPQKNTAGTGKAKVSKRLQLVHG
GTSDSAAAAVDWREDRDQRARSGGALNPSAKGKRRSGAGGAGSEGGGKED
EGPPGAEDGAAELRFDPLRTLEYLKSLPIYEDQAVYSETLPGRAGEYEDT
LRPLHTEVKAALERSKGVTRLFKHQALAIDAAAAGRHVALSTATSSGKSV
VFNVSVIEAIVGTRPDAVALYLFPTKALAQDQLRSLKELVGASPYLSERV
RPMTLDGDTPFREVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase