prot_Ecto-sp9_F_contig980.17893.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig980.17893.1
Unique Nameprot_Ecto-sp9_F_contig980.17893.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length246
Homology
BLAST of mRNA_Ecto-sp9_F_contig980.17893.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU98_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 1.090e-109
Identity = 166/169 (98.22%), Postives = 168/169 (99.41%), Query Frame = 0
Query:   77 MRKRSSRTVLFAREGEPMGPGTQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNSEIGQNVTNAAAGKKPDGDVSSSAPPPPAGSPFSKLNDAREAGKGAGSRKVDDGMVQSGVIDVDSED 245
            MRKRSS TVLFAR+GEPMGPGTQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNSEIGQNVTNAAAGKKP+GDVSSSAPPPPAGSPFSKLNDAREAGKGAGSRKVDDGMVQSGVIDVDSED
Sbjct:    1 MRKRSSSTVLFARQGEPMGPGTQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNSEIGQNVTNAAAGKKPEGDVSSSAPPPPAGSPFSKLNDAREAGKGAGSRKVDDGMVQSGVIDVDSED 169          
BLAST of mRNA_Ecto-sp9_F_contig980.17893.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZL34_9STRA)

HSP 1 Score: 129 bits (323), Expect = 6.650e-34
Identity = 60/102 (58.82%), Postives = 76/102 (74.51%), Query Frame = 0
Query:   84 TVLFAREGEPMGPGTQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNSEIGQNV 185
            T + A+E    G G  +L+R+ KL +S+LIDLIGMS+Y LP  GE  D+GWAP+S+ALIF+LYG+ IFA   F EEILPG D +PTATIAWFLT S+ GQ +
Sbjct:   35 TAIRAKENG--GGGASELTREGKLIVSILIDLIGMSTYLLPVAGEGADVGWAPVSAALIFWLYGSGIFAAAGFAEEILPGLDFVPTATIAWFLTQSDAGQRI 134          
BLAST of mRNA_Ecto-sp9_F_contig980.17893.1 vs.
Match: Uncharacterized (protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZS3_EMIHU)

HSP 1 Score: 122 bits (305), Expect = 8.730e-31
Identity = 62/118 (52.54%), Postives = 80/118 (67.80%), Query Frame = 0
Query:   95 GPGTQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNSEIGQNVTNAAAGKKPDGDVSSSAPPPPAGSPFS 212
            GP  ++L    KL +S+LIDL+G++SYA+P  GE  DL WAP+S+ L+ YLYGNSI  GLAF EE+LPG DV+PTATI W L N+E+G++V  A            SAPPP A +P S
Sbjct:   74 GPDNERL---IKLLVSILIDLVGVASYAVPLAGEGADLAWAPVSALLVNYLYGNSILTGLAFAEEVLPGLDVVPTATIGWLLENTELGRSVNEA------------SAPPPKADAPSS 176          
BLAST of mRNA_Ecto-sp9_F_contig980.17893.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AG80_9EUKA)

HSP 1 Score: 118 bits (296), Expect = 1.580e-29
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = 0
Query:   92 EPMGP-GTQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNSEIGQNVTNAA 189
            EP  P   +Q ++  KL IS+LIDLIGM++Y  P VGE  DL WAPIS+ LI  LYGN++  GLAF EE+LPG D+IPTATIAW L N+E GQN  +AA
Sbjct:   57 EPPTPLADEQQAKLGKLLISLLIDLIGMATYVFPLVGETGDLAWAPISALLINQLYGNALITGLAFAEELLPGLDIIPTATIAWVLENTEFGQNFNSAA 155          
BLAST of mRNA_Ecto-sp9_F_contig980.17893.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIK8_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.170e-29
Identity = 54/90 (60.00%), Postives = 71/90 (78.89%), Query Frame = 0
Query:   95 GPGTQQ-LSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNSEIGQ 183
            GPG +   S++ KL +S+L+DL+GMS+YALPGVGEA D+ WAPIS+ L+ YLYGN+  +GLA VEE+LPG D IPTATIAWF+T   + +
Sbjct:   65 GPGGEAGASKETKLLLSLLVDLVGMSTYALPGVGEAGDIAWAPISAILVQYLYGNAALSGLALVEELLPGLDFIPTATIAWFITYGTVSE 154          
BLAST of mRNA_Ecto-sp9_F_contig980.17893.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZMF8_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.290e-27
Identity = 54/109 (49.54%), Postives = 73/109 (66.97%), Query Frame = 0
Query:   75 RAMRKRSSRTVLFA----REGEPMGPGTQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNS 179
            R +++R S  + F      +     PG   +    KL + +LID IG++S+A PG+GEATD+GWAPIS+ L+ YL+GN +F  LA VEE+ PGFD +PTATIAWFL NS
Sbjct:   82 RLLQRRQSSVLRFGFGNGNDNSNNAPGGADMDPGLKLLVCILIDFIGVASFAAPGLGEATDVGWAPISAFLVNYLFGNGLFTALALVEELSPGFDFVPTATIAWFLENS 190          
BLAST of mRNA_Ecto-sp9_F_contig980.17893.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E380_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.150e-27
Identity = 53/90 (58.89%), Postives = 67/90 (74.44%), Query Frame = 0
Query:   84 TVLFAREGEPMGPGTQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIA 173
            T + A+E    G G  +L+R+ KL +S+LIDLIGMS+Y LP  GE  D+GWAP+S+ALIF+LYG+ IFA   F EEILPG D +PTATIA
Sbjct:   35 TAIRAKENG--GGGASELTREGKLIVSILIDLIGMSTYLLPVAGEGADVGWAPVSAALIFWLYGSGIFAAAGFAEEILPGLDFVPTATIA 122          
BLAST of mRNA_Ecto-sp9_F_contig980.17893.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CFZ0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 7.720e-27
Identity = 51/81 (62.96%), Postives = 63/81 (77.78%), Query Frame = 0
Query:   98 TQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTN 178
            TQ+  +  KL +S+LID +G +S+ALPG+GEATD+GWAPIS  LI +LYGNS+ +GL FVEEILPGFD IPTATI     N
Sbjct:   68 TQEQEKAVKLLLSLLIDFVGYASFALPGLGEATDIGWAPISGILIQFLYGNSLLSGLGFVEEILPGFDFIPTATIGTLSCN 148          
BLAST of mRNA_Ecto-sp9_F_contig980.17893.1 vs.
Match: Hypothetical (protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5P0_9EUKA)

HSP 1 Score: 107 bits (266), Expect = 1.950e-25
Identity = 50/92 (54.35%), Postives = 66/92 (71.74%), Query Frame = 0
Query:   90 EGEPMGPGTQQLSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNSEI 181
            E  PM    QQ  + +KL IS+L+D IGM +YA+P  GEA D+GWAPIS+A++FYLYG  +   LA VEE+LPG D++PTATI W L  +E+
Sbjct:   13 EQPPMDSTEQQ--KISKLLISLLVDAIGMFTYAIPVAGEAADIGWAPISAAVVFYLYGPGLLPALALVEELLPGLDIVPTATIGWLLEYTEL 102          
BLAST of mRNA_Ecto-sp9_F_contig980.17893.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SDQ1_9SPIT)

HSP 1 Score: 107 bits (267), Expect = 2.080e-25
Identity = 50/92 (54.35%), Postives = 64/92 (69.57%), Query Frame = 0
Query:  105 AKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSIFAGLAFVEEILPGFDVIPTATIAWFLTNSEIGQNVTNAAAGKKPDG 196
            AKL +S+LIDL+G S++ LP   E  DL WAP+S+ L+  LYGN +  GLAF EE+LP  D IPTATI W L N++IG+N   AAA +K  G
Sbjct:   57 AKLLLSLLIDLVGFSTFVLPLAAEGADLAWAPVSALLVHQLYGNGLLTGLAFCEELLPATDFIPTATIGWVLENTQIGRNFNQAAADRKAGG 148          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig980.17893.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.090e-10998.22protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU98... [more]
Hypothetical6.650e-3458.82protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Uncharacterized8.730e-3152.54protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID... [more]
Hypothetical1.580e-2959.60protein n=1 Tax=Haptolina ericina TaxID=156174 Rep... [more]
Hypothetical2.170e-2960.00protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical2.290e-2749.54protein n=1 Tax=Pseudo-nitzschia australis TaxID=4... [more]
Hypothetical5.150e-2758.89protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical7.720e-2762.96protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical1.950e-2554.35protein n=1 Tax=Coccolithus braarudii TaxID=221442... [more]
Hypothetical2.080e-2554.35protein (Fragment) n=1 Tax=Strombidinopsis acumina... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.533

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig980contigEcto-sp9_F_contig980:23350..25783 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig980.17893.1mRNA_Ecto-sp9_F_contig980.17893.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig980 23189..26403 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig980.17893.1 ID=prot_Ecto-sp9_F_contig980.17893.1|Name=mRNA_Ecto-sp9_F_contig980.17893.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=246bp
MGLLRLSSVVIPLLVRGEAFTASPPPLSALQQQRSTLRPATVNAARLAHP
SGREQQLRPPSLLPSTIPLHPRSTRAMRKRSSRTVLFAREGEPMGPGTQQ
LSRQAKLAISVLIDLIGMSSYALPGVGEATDLGWAPISSALIFYLYGNSI
FAGLAFVEEILPGFDVIPTATIAWFLTNSEIGQNVTNAAAGKKPDGDVSS
SAPPPPAGSPFSKLNDAREAGKGAGSRKVDDGMVQSGVIDVDSED*
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