prot_Ecto-sp9_F_contig98.17889.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig98.17889.1
Unique Nameprot_Ecto-sp9_F_contig98.17889.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length520
Homology
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BLAST of mRNA_Ecto-sp9_F_contig98.17889.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC6_ECTSI)

HSP 1 Score: 741 bits (1912), Expect = 7.810e-250
Identity = 429/504 (85.12%), Postives = 433/504 (85.91%), Query Frame = 0 
Query:    1 MCENDTITEGRRGTCLTELTRHKSSVCDAGLDNEVGAAAVAPDPQGGLAAKCAREDSSENTAAHKRLLAESLIVFHDKRSSSRQLATQIMVRLVGRLAVVQGADDIIAVVEKLHVPHASRSGVNAIITDLDPKIPKLMEFLRLRSLRPGLGKLPIVSVIVVVDPDDLRPELLASAIESGVDAVIRRPLERFSFTSCVGEVLRRHASVEFVYKDVVGEVETFNYPRFLLEGFHFLGVGETSSVGGGVGEGDSTFNEIAGDAVRTYTKEASTGSGNGSVTTIGTGGWAQDGIVSPNGGNAGQSDPGSGFLRSHSIVGVVSSIERSASSVAAPPEXXXXXXXXXXXXXSTTATDATGFGSAARKSSRQAATARMMGKTKVLTTMRGGHVKITSPSLRPRLYLCRGDKGYVGGGGSAMNANTDSRDGEKRSSTGCSNGGVGGSXXXXXXXXDRDRQNQGGTEVDRRVESERQV------------SNELAPFVKRRPPVLGDPTTSSG 492
            MCENDTITEGRRGTCLTELTRHKSSVCDAGLDNEVGAAAVAPDPQ GLAAKCAREDSSENTAAHKRLLAESLIVFHDKRSSSRQLATQIMVRLVGRLAVVQGADDIIAVVEKLHVPHASRSGVNAIITDLDPKIPKLME LRLRSLRPGLGKLPIVSVIVVVDPDDLRPELLASAIESGVDAVIRRPLER SFTSCVGEVLR+HASVEFVYKDVVGEVETFNYPRFLLEGFHFLGVGET SVGGGVGEGDSTFNEIAGDAVRTYTKEASTGSGNGSVTT+GTGGWAQDGIVSPNGGNAGQS                              E      XXXXXX STTATDATGFGSAARKSSRQAATARMMGKTKVLTTMRGGHVKITSPSLRPRLYL  GDKGYVGGGGS MNANTDSRDG KRSS GCSNGGVGGSXXXXXXX DRDRQNQGGTEVDRRVESERQ             S+ L P V    P  G  TTS+G
Sbjct:    1 MCENDTITEGRRGTCLTELTRHKSSVCDAGLDNEVGAAAVAPDPQRGLAAKCAREDSSENTAAHKRLLAESLIVFHDKRSSSRQLATQIMVRLVGRLAVVQGADDIIAVVEKLHVPHASRSGVNAIITDLDPKIPKLMESLRLRSLRPGLGKLPIVSVIVVVDPDDLRPELLASAIESGVDAVIRRPLERSSFTSCVGEVLRKHASVEFVYKDVVGEVETFNYPRFLLEGFHFLGVGETGSVGGGVGEGDSTFNEIAGDAVRTYTKEASTGSGNGSVTTVGTGGWAQDGIVSPNGGNAGQS------------------------------EAPLPTPXXXXXXASTTATDATGFGSAARKSSRQAATARMMGKTKVLTTMRGGHVKITSPSLRPRLYLYTGDKGYVGGGGSTMNANTDSRDGGKRSSAGCSNGGVGGSXXXXXXXGDRDRQNQGGTEVDRRVESERQAWQSKGRTAAAGTSSSLRPSV----PTPGSFTTSAG 470
[Close]
BLAST of mRNA_Ecto-sp9_F_contig98.17889.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M1_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 4.860e-32
Identity = 84/96 (87.50%), Postives = 88/96 (91.67%), Query Frame = 0 
Query:  374 KTKVLTTMRGGHVKITSPSLRPRLYLCRGDKGYVGGGGSAMNANTDSRDGEKRSSTGCSNGGVGGSXXXXXXXXDRDRQNQGGTEVDRRVESERQV 469
            +TKVLTTMRGGHVKITSPSLRPRLYL  GDKGYVGGGGSAMNANTDS D  +RSSTGCSNGGVGGSXXXXXXX DRDR+NQ GTE+DRRVESERQ 
Sbjct:    4 QTKVLTTMRGGHVKITSPSLRPRLYLYPGDKGYVGGGGSAMNANTDSHDRGERSSTGCSNGGVGGSXXXXXXXGDRDRRNQSGTELDRRVESERQA 99
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig98.17889.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Cyclic7.810e-25085.12nucleotide-binding domain-containing protein n=1 T... [more]
Cyclic4.860e-3287.50nucleotide-binding domain-containing protein n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig98contigEcto-sp9_F_contig98:27272..33808 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig98.17889.1mRNA_Ecto-sp9_F_contig98.17889.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig98 27272..33808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig98.17889.1 ID=prot_Ecto-sp9_F_contig98.17889.1|Name=mRNA_Ecto-sp9_F_contig98.17889.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=520bp
MCENDTITEGRRGTCLTELTRHKSSVCDAGLDNEVGAAAVAPDPQGGLAA
KCAREDSSENTAAHKRLLAESLIVFHDKRSSSRQLATQIMVRLVGRLAVV
QGADDIIAVVEKLHVPHASRSGVNAIITDLDPKIPKLMEFLRLRSLRPGL
GKLPIVSVIVVVDPDDLRPELLASAIESGVDAVIRRPLERFSFTSCVGEV
LRRHASVEFVYKDVVGEVETFNYPRFLLEGFHFLGVGETSSVGGGVGEGD
STFNEIAGDAVRTYTKEASTGSGNGSVTTIGTGGWAQDGIVSPNGGNAGQ
SDPGSGFLRSHSIVGVVSSIERSASSVAAPPEAPLPTPLETPVEASTTAT
DATGFGSAARKSSRQAATARMMGKTKVLTTMRGGHVKITSPSLRPRLYLC
RGDKGYVGGGGSAMNANTDSRDGEKRSSTGCSNGGVGGSGGINGAGGDRD
RQNQGGTEVDRRVESERQVSNELAPFVKRRPPVLGDPTTSSGLRKGRLAT
TMRLVENTFAFTKGQKANTA
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