prot_Ecto-sp9_F_contig9784.17873.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9784.17873.1
Unique Nameprot_Ecto-sp9_F_contig9784.17873.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length135
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9784.17873.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.790e-11
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0 
Query:    1 QGKYAEAEPFYERAQALREKVLGPDHPDVAATLNDRAGLLE 41
            QG YAEA+P YER+QA+R+KVLGPDHPDVA  LN+RAGLL+
Sbjct:  205 QGNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGLLK 245
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BLAST of mRNA_Ecto-sp9_F_contig9784.17873.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 7.900e-11
Identity = 31/43 (72.09%), Postives = 38/43 (88.37%), Query Frame = 0 
Query:    1 QGKYAEAEPFYERAQALREKVLGPDHPDVAATLNDRAGLLERQ 43
            QGKYAEAEP YER+QA++E VLGP+HPDV  +LN+RA LLE+Q
Sbjct:  660 QGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEKQ 702
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9784.17873.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.140e-10
Identity = 31/42 (73.81%), Postives = 38/42 (90.48%), Query Frame = 0 
Query:    1 QGKYAEAEPFYERAQALREKVLGPDHPDVAATLNDRAGLLER 42
            QGKYAEAEP YER+ A++EKVLGP+HPDVA +L++RA LLER
Sbjct:  693 QGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLER 734
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9784.17873.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.240e-10
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 0 
Query:    1 QGKYAEAEPFYERAQALREKVLGPDHPDVAATLNDRAGLLERQ 43
            QGKY EAEP YER+QA++EKVLG +HPDVA++LN+R  LL  Q
Sbjct:   18 QGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQ 60
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9784.17873.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 1.940e-10
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 0 
Query:    1 QGKYAEAEPFYERAQALREKVLGPDHPDVAATLNDRAGLLERQ 43
            QGKY +AEP  ER+Q +REKVLGP+HPDVA +LN+RAGLLE Q
Sbjct:  498 QGKYDDAEPLNERSQTIREKVLGPEHPDVAQSLNNRAGLLEAQ 540
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9784.17873.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L226_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 4.880e-10
Identity = 31/41 (75.61%), Postives = 36/41 (87.80%), Query Frame = 0 
Query:    1 QGKYAEAEPFYERAQALREKVLGPDHPDVAATLNDRAGLLE 41
            QGK+AEAEP YER+QA+REKVLGP HPDVA  LN+RA LL+
Sbjct:  366 QGKHAEAEPLYERSQAIREKVLGPKHPDVAEVLNNRATLLK 406
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9784.17873.1 vs.
Match: Integrase (catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK1_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 9.660e-10
Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 0 
Query:    1 QGKYAEAEPFYERAQALREKVLGPDHPDVAATLNDRAGLLERQ 43
            QGKY EAEP YER+QA+REKVLG +HP VA +LNDRA LL +Q
Sbjct:   14 QGKYTEAEPLYERSQAIREKVLGSEHPRVATSLNDRAKLLCKQ 56
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9784.17873.1 vs.
Match: tetratricopeptide (repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 60.5 bits (145), Expect = 1.320e-9
Identity = 28/39 (71.79%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:    1 QGKYAEAEPFYERAQALREKVLGPDHPDVAATLNDRAGL 39
            QGKY EAEP Y+RA  +RE VLGPDHP VA TLN+ AGL
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9784.17873.1 vs.
Match: Tetratricopeptide (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B0_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.480e-9
Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 0 
Query:    1 QGKYAEAEPFYERAQALREKVLGPDHPDVAATLNDRAGLLERQ 43
            QGKYAEAE  YER++A+R+K L PDHPDVA +LNDRA LL+++
Sbjct:  206 QGKYAEAEQLYERSEAIRDKTLDPDHPDVARSLNDRALLLDKK 248
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9784.17873.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.500e-9
Identity = 30/42 (71.43%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:    2 GKYAEAEPFYERAQALREKVLGPDHPDVAATLNDRAGLLERQ 43
            GKY +AEP YER QA+ EK LGP+HP VA TLN+RAGLLE Q
Sbjct:  941 GKYTDAEPLYERCQAIYEKRLGPEHPYVATTLNNRAGLLEAQ 982
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9784.17873.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.790e-1175.61protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
NB-ARC7.900e-1172.09domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
NB-ARC1.140e-1073.81and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
Uncharacterized1.240e-1067.44protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.940e-1072.09protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.880e-1075.61protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Integrase9.660e-1072.09catalytic domain-containing protein (Fragment) n=1... [more]
tetratricopeptide1.320e-971.79repeat protein n=1 Tax=Desulfobacter hydrogenophil... [more]
Tetratricopeptide1.480e-967.44repeat protein n=1 Tax=Ectocarpus siliculosus TaxI... [more]
Uncharacterized2.500e-971.43protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 72..105
e-value: 91.0
score: 6.5
coord: 30..63
e-value: 0.29
score: 20.2
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..62
e-value: 2.5E-18
score: 66.1
NoneNo IPR availablePFAMPF13374TPR_10coord: 75..112
e-value: 3.4E-5
score: 23.5
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..120
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 1..120
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..130
e-value: 1.4E-45
score: 157.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..120
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..63
score: 9.261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9784contigEcto-sp9_F_contig9784:2644..3715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9784.17873.1mRNA_Ecto-sp9_F_contig9784.17873.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9784 2599..3715 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9784.17873.1 ID=prot_Ecto-sp9_F_contig9784.17873.1|Name=mRNA_Ecto-sp9_F_contig9784.17873.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=135bp
QGKYAEAEPFYERAQALREKVLGPDHPDVAATLNDRAGLLERQGKCEEAE
PLYKRSLAIDEKVYGLDHPEVATDLNNWAGLLETQEKYTGAIPLLERALS
ILTKRLGFNHPDTVSTQNSLEAVRKMVWAQLDSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom