prot_Ecto-sp9_F_contig974.17842.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig974.17842.1
Unique Nameprot_Ecto-sp9_F_contig974.17842.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length564
Homology
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BLAST of mRNA_Ecto-sp9_F_contig974.17842.1 vs.
Match: EsV-1-7 (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH1_ECTSI)

HSP 1 Score: 612 bits (1579), Expect = 2.210e-210
Identity = 518/535 (96.82%), Postives = 520/535 (97.20%), Query Frame = 0 
Query:    1 MHDSHRRCEHSGCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGAGYTLLMLAQRERLAXXXXXXXXXXXQR--ARDRAPASGSWPGKDMPFSDYRPRWEAAGSSGSSGGTSFSGGQPAPGGRTGTFGSNSSSSGSFLSSQRSGGGGGDSGSFTGESXXXXXXXXTNEGAAGGEPGSAGHDGKAAAHNPQPWVWTAQPRGSSQGARRPPPLKNPAEAGVLGIAGRQQSPLLDSTRGDSPGAEWTKPSSTQSAHAMYPAVKRHCSPRRRSFSHSPEPGSRTMAGLTGSMAGLQASSPASPNIMSLGASGGTPSPGAMGIPTPPGSSGSAALPPPHRAPRSSAQRLPQPQFQNRAVPRSSSGGPPRPPRSLSPGGVASTARSPDGFVYALSGAGRS 533
            MHDSHRRCEHSGCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGAGYTLLMLAQRERLAXXXXXXXXXXX    ARDRAPASGSWPGKDMP+SDYRPRWEAAGSSGSSGGTSFSGGQPAPGGRTGTFGSNSSSSGSFLSSQRSGGGGGDSGSFTGE XXXXXXXX       GEPGSAG DGKAAAHNPQPWVWTAQPRGSSQGARRPPPLKNPAEAGVLGIAGRQQSPLLDSTRGDSPGAEWTKPSSTQSAHAMYPAVKRHCSPRRRSFSHSPEPGSRTMAGLTGSMAGLQASSPASPNIMSLGASGGTPSPGAMGIPTPPGSSGSAALPPPHRA RS+AQRLPQPQFQNRAVPRSSSGGPPRPPRSLSPGGVASTARSPDGFVYALSGAG S
Sbjct:    1 MHDSHRRCEHSGCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGAGYTLLMLAQRERLAXXXXXXXXXXXXXXXARDRAPASGSWPGKDMPYSDYRPRWEAAGSSGSSGGTSFSGGQPAPGGRTGTFGSNSSSSGSFLSSQRSGGGGGDSGSFTGEXXXXXXXXXXXXXXXXGEPGSAGQDGKAAAHNPQPWVWTAQPRGSSQGARRPPPLKNPAEAGVLGIAGRQQSPLLDSTRGDSPGAEWTKPSSTQSAHAMYPAVKRHCSPRRRSFSHSPEPGSRTMAGLTGSMAGLQASSPASPNIMSLGASGGTPSPGAMGIPTPPGSSGSAALPPPHRARRSTAQRLPQPQFQNRAVPRSSSGGPPRPPRSLSPGGVASTARSPDGFVYALSGAGGS 535
[Close]
BLAST of mRNA_Ecto-sp9_F_contig974.17842.1 vs.
Match: EsV-1-7 ((Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFU8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.170e-6
Identity = 22/31 (70.97%), Postives = 28/31 (90.32%), Query Frame = 0 
Query:    4 SHRRCEHSGCTKWPLYAFEGEKAKYCSQHKD 34
            S+RRCE  GCTKWPLYA+EGEKA++CS H++
Sbjct:   52 SYRRCEALGCTKWPLYAYEGEKARFCSAHRE 82
[Close]
BLAST of mRNA_Ecto-sp9_F_contig974.17842.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD22_HETAK)

HSP 1 Score: 55.5 bits (132), Expect = 4.150e-5
Identity = 21/40 (52.50%), Postives = 35/40 (87.50%), Query Frame = 0 
Query:    4 SHRRCEHSGCTKWPLYAFEGEK-AKYCSQHKDEGMVDVRS 42
            S +RCEH+GC+K P++ FEGE+  ++C+QHK++GMV+V++
Sbjct:  142 SKKRCEHAGCSKEPVFNFEGERRGRFCAQHKEQGMVNVKN 181
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig974.17842.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
EsV-1-72.210e-21096.82n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH1_ECTSI[more]
EsV-1-73.170e-670.97(Fragment) n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
Hypothetical4.150e-552.50protein (Fragment) n=2 Tax=Heterosigma akashiwo Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig974contigEcto-sp9_F_contig974:13001..19907 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig974.17842.1mRNA_Ecto-sp9_F_contig974.17842.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig974 13001..20104 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig974.17842.1 ID=prot_Ecto-sp9_F_contig974.17842.1|Name=mRNA_Ecto-sp9_F_contig974.17842.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=564bp
MHDSHRRCEHSGCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSRRCQEPSC
TRQPSFGFEHQKPRFCAAHKDVGMVDVVSRRCEETDCRRRPLYGHEGEKG
RFCSYHKSDGMVDVVNKRCQHPGCKKRPVFGFEGEKGRFCSLHRSGGMVD
VVSRRCDSPGCKRQPSGTTDSTHVQFCSLHRGDGGAGYTLLMLAQRERLA
AAAALEEQQKQQRARDRAPASGSWPGKDMPFSDYRPRWEAAGSSGSSGGT
SFSGGQPAPGGRTGTFGSNSSSSGSFLSSQRSGGGGGDSGSFTGESFLST
QRRGTNEGAAGGEPGSAGHDGKAAAHNPQPWVWTAQPRGSSQGARRPPPL
KNPAEAGVLGIAGRQQSPLLDSTRGDSPGAEWTKPSSTQSAHAMYPAVKR
HCSPRRRSFSHSPEPGSRTMAGLTGSMAGLQASSPASPNIMSLGASGGTP
SPGAMGIPTPPGSSGSAALPPPHRAPRSSAQRLPQPQFQNRAVPRSSSGG
PPRPPRSLSPGGVASTARSPDGFVYALSGAGRSPGSGVGFSPSGGPPSAS
PGGGMSGVFSPGSA
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