prot_Ecto-sp9_F_contig9733.17836.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9733.17836.1
Unique Nameprot_Ecto-sp9_F_contig9733.17836.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length439
Homology
BLAST of mRNA_Ecto-sp9_F_contig9733.17836.1 vs.
Match: Alpha,alpha-trehalose-phosphate (synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K1_ECTSI)

HSP 1 Score: 560 bits (1442), Expect = 2.220e-191
Identity = 401/430 (93.26%), Postives = 404/430 (93.95%), Query Frame = 0
Query:    1 SQEARRGTRKLSTANYMQEQPATYDAETEGSWLKHGGGRGAGVEGGGGEPRGRDPSAASSAGNWDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPLRHDRHREVSAASLGSVSSVDEERGRERGRSGAARSTSAEMAPAPAPTVREEATIAGPEEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVKTTGWSGDDPYVAPVGDLPGQQKGFVGAEPRQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGPAGGVGAGGGGREGLEKVRTRSRSHSMHMGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEASFRLPFLSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQ 430
            +QEARRGTRKLSTANYMQEQPATYDAETEGS  KHGGGRG GVEGGGGEPRGRDPSAASSAGNWDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      GPPLRHDRHREVSAASLGSVSSVDEERGRERGRSGAARSTSAEMAPA APTVREEA+IAGPEEVG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXVVKTTGWSGDDPYVAPVGDLPGQQKGFVGAEPRQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGPAGGVGAGGGGREGLEKVRTRSRSHSMHMGD+GVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKE       LSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQ
Sbjct:  316 AQEARRGTRKLSTANYMQEQPATYDAETEGSRGKHGGGRGEGVEGGGGEPRGRDPSAASSAGNWDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------GPPLRHDRHREVSAASLGSVSSVDEERGRERGRSGAARSTSAEMAPALAPTVREEASIAGPEEVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPRMPQGDXXXXXXXVVKTTGWSGDDPYVAPVGDLPGQQKGFVGAEPRQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGPAGGVGAGGGGREGLEKVRTRSRSHSMHMGDIGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKE-------LSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQ 732          
BLAST of mRNA_Ecto-sp9_F_contig9733.17836.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ0_9PHAE)

HSP 1 Score: 367 bits (942), Expect = 2.460e-111
Identity = 318/419 (75.89%), Postives = 324/419 (77.33%), Query Frame = 0
Query:   30 GSWLKHGGGRGAGVEGGGGEPRGRDPSAASSAGNWDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPLRHDRHREVSAASLGSVSSVDEERGRERGRSGAARSTSAEMAPAPAPTVREEATIAGPEEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVKTTGWSGDDPYVAPVGDLPGQQKGFVGAEPRQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGPAGGVGAG------------------GGGREGLEKVRTRSRSHSMHMGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEASFRLPFLSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQ 430
            GSWLKHG            EPRGR PSAAS       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPLRH+RHREVS ASL SVSSVDE R                      PTVREEAT+ GP+EVG            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     V++TTGWS DD YVAPVGDLPGQQKGFVGAEPRQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAG A                        GGGREGLEKVRTRSRSHSMHMGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEA   +  LSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQ
Sbjct:  901 GSWLKHGXXXXXXXXXXXXEPRGRYPSAASXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPPLRHNRHREVSEASLVSVSSVDEGRXXXXXXXXXXXXXXXXXXXXXXPTVREEATVVGPKEVGGGAARVADKSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG---VMRTTGWSEDDAYVAPVGDLPGQQKGFVGAEPRQWEAGKRAHEQQRGXXXXXXGGSVSGDLYPAAARDLLMAGAAXXXXXXXXXXGXXXXXXXXXXXXXGGGREGLEKVRTRSRSHSMHMGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEAI--VGPLSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQ 1313          
BLAST of mRNA_Ecto-sp9_F_contig9733.17836.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA9_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 5.440e-7
Identity = 33/59 (55.93%), Postives = 39/59 (66.10%), Query Frame = 0
Query:  329 VNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEASFRLPFLSQVKDKEDYGSFE 387
            + GLDLPINTFSCTVGLK+SQA YYIKS  A  AL K+ S      +Q  + ED   F+
Sbjct:  359 LRGLDLPINTFSCTVGLKVSQAQYYIKSRQAVGALLKDLSLLALHAAQEANFEDEEEFD 417          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9733.17836.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Alpha,alpha-trehalose-phosphate2.220e-19193.26synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
Uncharacterized2.460e-11175.89protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.440e-755.93protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9733contigEcto-sp9_F_contig9733:634..4970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9733.17836.1mRNA_Ecto-sp9_F_contig9733.17836.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9733 634..4970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9733.17836.1 ID=prot_Ecto-sp9_F_contig9733.17836.1|Name=mRNA_Ecto-sp9_F_contig9733.17836.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=439bp
SQEARRGTRKLSTANYMQEQPATYDAETEGSWLKHGGGRGAGVEGGGGEP
RGRDPSAASSAGNWDGGGGGGGGSGWSSFSTTPAPASATPQAAAAAAAAA
AAAAAGPPLRHDRHREVSAASLGSVSSVDEERGRERGRSGAARSTSAEMA
PAPAPTVREEATIAGPEEVGGGAARAADKSALVEQQRAAAAAAAAASRQA
PSASTLLFTRMPPGDGGGSGGGVVKTTGWSGDDPYVAPVGDLPGQQKGFV
GAEPRQWEAGKRAHEQQRGRGRGEGGGSVSGDLYPAAARDLLMAGPAGGV
GAGGGGREGLEKVRTRSRSHSMHMGDVGVNGLDLPINTFSCTVGLKLSQA
NYYIKSSAAAAALCKEASFRLPFLSQVKDKEDYGSFEGYEDGAGVYVQYA
VANQQGAAKAPPHTSSASNIADLDIVMGSQVLLLYVGG*
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