prot_Ecto-sp9_F_contig9721.17826.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9721.17826.1
Unique Nameprot_Ecto-sp9_F_contig9721.17826.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length560
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9721.17826.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBA6_9PHAE)

HSP 1 Score: 627 bits (1618), Expect = 1.510e-214
Identity = 431/559 (77.10%), Postives = 443/559 (79.25%), Query Frame = 0 
Query:    1 MSETPAVGPCGLVAGCTGDKQVTVITQEQLNGLGSLRDVDLFVKLSALRVGGIWCEDCHQLLFNAASGSKQXXXXXXXQPETGRKRDHAETMTHERPQPQPLVAAPGDTREPAGHGLAAMRGNTPSDAAAAPQAXXXXXXXXXXXXXXXXXXXXXXAPVEEADGPRYSDSTPYPSPPAAPEVNLAAALPPSVENGAGGRSAGGATGQALMPPALPAGTGSTTLVSPAAXXXXXXXXXXXXXXXXAPLPGASQAVPMTGVPTATQXXXXXXXXXXXXXXXXXXXXXXAVALYGSTPVSGVPQAVLWPQQTVLPLAGHQQQLLPQQALQMAAISAATSAMEAAHQLPPLQQHXXXXXXXXXXXXXXXXXXXXQLVQXXXXXXXXXXXXXXXXXXQVGAGLPGGTVIRVGPAGAPAGGPAVSTHEAVLPLQGQQQQHHEMGVSAVAQPVVAHPPGGPGEGAPTSPTASIHGAPAAVGQVPYPVWMGPVLPQQQQDSRGTGGSGVSARSPKSRSGVMGGGRXXXXXXXGGIDLNGRLLQHPAYVMHAGGSTESLETAERRRQE 559
            MSETPAVGPCGLVAGC GDKQVT ITQEQLNGLGSLRDVDLFVKLSALRVGGIWCEDCHQLLFNAASGSKQ       QPE+GRKRDHAETMTHERPQPQPLVA PGDTREP GHGLAAMRGNTPSDAA+ PQA  XXXXXXXXXXXX         PVEEADG  YSDS PYPSPPAAPEVNLAAALPPS+ENGAGG SAGGATGQALMPPALPAGTGSTTLVSPAA                APLPGASQ VP+ GV TATQXXXXXXXXXXXXXXXXXXXXXXAVALYG+TPVSGVPQA LW                PQQALQMAA+ AATSAMEAA+QLPPLQQHXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXX          GAGL GGTVIRVGPAGAPAGGPAVS HE V+PL                         GPGEGAPTSPTASIHGAPAAVGQ+PYPVWMGPVLPQQQQDS+G GGSGVSARSPKSRSGVMGG +       GGIDLNGRLLQHPAYVMHAGG+ ESLETAERRRQE
Sbjct:    1 MSETPAVGPCGLVAGCAGDKQVTFITQEQLNGLGSLRDVDLFVKLSALRVGGIWCEDCHQLLFNAASGSKQQQQL---QPESGRKRDHAETMTHERPQPQPLVAPPGDTREPVGHGLAAMRGNTPSDAASTPQAATXXXXXXXXXXXX---------PVEEADGSTYSDSAPYPSPPAAPEVNLAAALPPSIENGAGGESAGGATGQALMPPALPAGTGSTTLVSPAAEGGNEASVAQAAAAAAAPLPGASQPVPLAGVATATQXXXXXXXXXXXXXXXXXXXXXXAVALYGATPVSGVPQAALW----------------PQQALQMAAMEAATSAMEAANQLPPLQQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------AGAGLLGGTVIRVGPAGAPAGGPAVSMHETVVPLXXXXXXXXXXXXXXXXXXXXXXXXXGPGEGAPTSPTASIHGAPAAVGQLPYPVWMGPVLPQQQQDSQGAGGSGVSARSPKSRSGVMGGRKGVGLGGGGGIDLNGRLLQHPAYVMHAGGALESLETAERRRQE 522
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9721.17826.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.510e-21477.10protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9721contigEcto-sp9_F_contig9721:3198..4970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9721.17826.1mRNA_Ecto-sp9_F_contig9721.17826.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9721 3198..4970 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9721.17826.1 ID=prot_Ecto-sp9_F_contig9721.17826.1|Name=mRNA_Ecto-sp9_F_contig9721.17826.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=560bp
MSETPAVGPCGLVAGCTGDKQVTVITQEQLNGLGSLRDVDLFVKLSALRV
GGIWCEDCHQLLFNAASGSKQQQQQQQLQPETGRKRDHAETMTHERPQPQ
PLVAAPGDTREPAGHGLAAMRGNTPSDAAAAPQAATASAAAAAAAAAAAA
AAATAAAPVEEADGPRYSDSTPYPSPPAAPEVNLAAALPPSVENGAGGRS
AGGATGQALMPPALPAGTGSTTLVSPAAGGGNDASVAQAAAAAAAPLPGA
SQAVPMTGVPTATQAALPLAGAPYALPLYGAAPAGQAVALYGSTPVSGVP
QAVLWPQQTVLPLAGHQQQLLPQQALQMAAISAATSAMEAAHQLPPLQQH
QPPPQLQAALQHHSAPQQQQQLVQQQQLVQQQQLVQQQQLQQQVGAGLPG
GTVIRVGPAGAPAGGPAVSTHEAVLPLQGQQQQHHEMGVSAVAQPVVAHP
PGGPGEGAPTSPTASIHGAPAAVGQVPYPVWMGPVLPQQQQDSRGTGGSG
VSARSPKSRSGVMGGGRGGGLGGGGGIDLNGRLLQHPAYVMHAGGSTESL
ETAERRRQE*
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