prot_Ecto-sp9_F_contig972.17824.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig972.17824.1
Unique Name	prot_Ecto-sp9_F_contig972.17824.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	863

Homology

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BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL21_ECTSI)

HSP 1 Score: 1024 bits (2647), Expect = 0.000e+0
Identity = 763/877 (87.00%), Postives = 766/877 (87.34%), Query Frame = 0

Query:    1 MRMENSPGPVEVPPVTPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXXXX--MPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVGMVQXXXXXXXXGGMMAGARGGMQMXXXXXXXXXXQQHGMGQQMMGMNANHPQQAAAPAPA--AGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQQAGSAPRGEGYGGXXXAGESKKKSDRSRREKGADRPSSDDSKARGGEEKPGRANPAAATAGAKSKDAPKDSGAAGVKGXXXXXXXXXXXXXXXXXXXAPPRPTRGWEKPEVTQQKQRGLSAGSDAGNRGGKATSAKSAGSSAGTDKKSVSAATAPISGDDGVGDSPAXXXXXXXXXXXXXXXXXXXDGGGRHPTSSGSKGAKAKEGSXXXXXXXXXXXXXXXXXXXEDAAKAPEDGKAAPPAASQWGGKKSFL-----------DVVKAPGNLPXXXXXXXXXXXXXXXXXXXXGNKAKGGGRIKSPLRGRPEPPSGESRDMKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGGSREKGAWA 862
            MRMENSPGPVEVPPVTPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVT DGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXX    MPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXX    XXXXXXXXXX      XXXXXX  GGMMAGARG M  XXXXXXXXXXQQHGMGQQMMGMNANHPQQAAAPAPA  AGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQQAGSAPRGEG+GGXXX GESKKKSDRSRREKGADRPSSDDSKARGGEEKPGRA+PA ATAGAKSKDA KDSGA     XXXXXXXXXXXXXXX    APPRPTRGWEKPEVTQQKQRGLSAGSDAGNRGGKATSAKSAGSSAGTDKKS+SAATAPISGDDGVGDS                                          XXXXXXXXXXXXXXXXXXX   AKAPEDGKAA                         DVVKA     XXXXXXXXXXXXXXXXXXXXGNKAKGGGRIKSPLRGRPEPPSGESRDMKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGGSREKGAWA
Sbjct:    1 MRMENSPGPVEVPPVTPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTSDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXXAGAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXGMRFXXXXXXXXXXXX--XXXXXXXXRGGGMMAGARGXMXXXXXXXXXXXXQQHGMGQQMMGMNANHPQQAAAPAPAPAAGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQQAGSAPRGEGHGGXXXXGESKKKSDRSRREKGADRPSSDDSKARGGEEKPGRADPAVATAGAKSKDASKDSGA--XXXXXXXXXXXXXXXXXXAGEWAPPRPTRGWEKPEVTQQKQRGLSAGSDAGNRGGKATSAKSAGSSAGTDKKSISAATAPISGDDGVGDSATAAVAASFSAEGSSEGGGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKAPEDGKAAXXXXXXXXXXXXXXXXXXXXXXXXXDVVKAXXXXXXXXXXXXXXXXXXXXXXXXXGNKAKGGGRIKSPLRGRPEPPSGESRDMKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGGSREKGAWA 871

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BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS0_9PHAE)

HSP 1 Score: 817 bits (2111), Expect = 2.880e-280
Identity = 702/1169 (60.05%), Postives = 715/1169 (61.16%), Query Frame = 0

Query:    3 MENSPGPVEVPPVTPEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPA-----EGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXXXXMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVGMVQXXXXXXXXGGMMAGARGGMQMXXXXXXXXXXQQHGMGQQMMGMNANHPQQAA----------------------------------------------------------------------------------------------------------------------------------------APAPAAGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQQAGSAPRGEGYGGXXXAGESKKKSDRSRREKGADRPSSDDSKA--------RGGEE---------------------------------------------------------KPGRANPAAATA-GAK-----------------------------------SKDAPKDSGAAGVKGXXXXXXXXXXXXXXXXXXX------------------------------------APPRPTRGWEKPEVTQQKQRGLSAGSDAGNRGGKATSAKSAG------------------------SSAGTDKKSVSAATAPISGDDGVGDSPAXXXXXXXXXXXXXXXXXXXDGG-GRHPTSSGSKGAKAKEGSXXXXXXXXXXXXXXXXXXXEDAAKAPEDGKAAPPAAS------QWGGKKSFLDVVKAPGNLPXXXXXXXXXXXXXXXXXXXXGNKAKGGGRIKSPLRGRPEPPSGESRDMKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGGSREKGAWA 862
            ME+SPGPVEVP VTPEA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        EGT+PP+VPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPS+TPQEKIR+IFTGDGVAPIKSIRSDVGDTWFVTMESEDDAL TILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAA                   MPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXX  MMAGARGGMQMXXXXXXXXXX QHGMGQQMMGMNANHPQQ                                                                                                                                          APAPA GGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREH+LAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQQA S PRGEG+G XXX          SRREKG DRPS              RG                                                            KP  A P+A    G K                                   +K  P  S AA    XXXXXXXXXXXXXXXXXXX                                    APPRPTRGWEKPEVTQQKQRGLSAGSDAG RGGKATSAK+AG                        SSAGT+KKSVSAATAPI       DS A                    GG G+HPTS            XXXXXXXX           EDAAKAPE GKA            QWGGKKSFLDVVKAPGNLP      XXXXXXXXXXXXXXGNKAKGGGR+KSPLRGRPE P GESRD KRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGG SREKGAWA
Sbjct:    1 MESSPGPVEVPRVTPEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTTPPVVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSDTPQEKIRKIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAAAAAAPYGLGAGPAGAG--MPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMAGARGGMQMXXXXXXXXXXXQHGMGQQMMGMNANHPQQGGGYGGANGGAGAPYSGQHQXXXXXXXXXXXXXXXXKKGDRGNSAQQGXXXXXXXXXXXXXXXXSGGRDMLSAANFPPLPGTDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAASTDDMVTTGEADASSPAADVPEAPAPAPGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHALAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQQAVSVPRGEGHGXXXXXXXXXXXXXXSRREKGTDRPSXXXXXXXXXXXXXXRGKSXXXXXXXXXXXXXPMGAYAAXLLKNPRPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSAKPSAKERKGDKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSAKSPPAKSSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPRPTRGWEKPEVTQQKQRGLSAGSDAGKRGGKATSAKAAGASYGLYIFAASGPAHPHSGEQSVGSSAGTEKKSVSAATAPIXXXXXXXDSAAAAASFSAEGSSEGGGVSDGSGGSGKHPTSX----XXXXXXXXXXXXXXXTDAAAPAGGDGEDAAKAPEGGKAXXXXXXXXXXXXQWGGKKSFLDVVKAPGNLPPPIATAXXXXXXXXXXXXXXGNKAKGGGRMKSPLRGRPEHPFGESRDTKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRSGGGVSREKGAWA 1163

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BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.
Match: HTH (La-type RNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL1_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.230e-64
Identity = 114/176 (64.77%), Postives = 143/176 (81.25%), Query Frame = 0

Query:   65 KLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEK-------IREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPV 233
            +L+GKEL+ AL++QVEFYFSK NLQSDGFLVS+M+A  CVP++VIAQF K++ LT+D   I  +V +S+VCTVTP GI+P++K ER+TIILREIPS+TP  K       +RE+F G+G+API+ +RSDVG TWFVT  SE DA+ TILALR +TFEGK +KARLK ENLLRSFFPV
Sbjct:   47 RLEGKELVDALRQQVEFYFSKANLQSDGFLVSRMDASGCVPISVIAQFAKVRALTTDEGAIAAAVANSSVCTVTPQGIRPNLKAERHTIILREIPSDTPPAKASCCCTCVRELFAGEGMAPIRGVRSDVGATWFVTCASEADAMATILALRSRTFEGKPVKARLKGENLLRSFFPV 222

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BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKN7_HETAK)

HSP 1 Score: 223 bits (567), Expect = 2.340e-63
Identity = 114/176 (64.77%), Postives = 141/176 (80.11%), Query Frame = 0

Query:   66 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQP 241
            L+G+ L  A+KKQ+EFYFS+QNLQ+DGFLVSKMNA M VP+ VIA+F KI+ LT +  +I  +++ S VC VT D IKP+ K ERNTIILREIPS TP+EK+REIFTG+G+API +IRSDVGDTWFVT+ SE  A+   LALR + FEG+ +KARLKSENLLR+F+PVP AA   P
Sbjct:   31 LEGEALREAVKKQIEFYFSRQNLQTDGFLVSKMNANMEVPITVIAEFAKIRALTREPDVIRAALEGSKVCIVTEDAIKPNFKTERNTIILREIPSNTPEEKVREIFTGEGMAPITNIRSDVGDTWFVTLGSEAAAVAACLALRERAFEGRPVKARLKSENLLRAFYPVPQAAADAP 206

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BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XI52_9STRA)

HSP 1 Score: 224 bits (572), Expect = 9.270e-61
Identity = 175/480 (36.46%), Postives = 234/480 (48.75%), Query Frame = 0

Query:   66 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTV--TPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXXXXMPGGIPYGMMNGMGAPMMNGQPNYG----------------------YSGPGARGGMY-GRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVGMVQXXXXXXXXGGMMAGARGGMQMXXXXXXXXXXQQHGMGQQMMGMNANHPQQAAAPAPAAGGLGYPGA----------FIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDP------QQQAGSAP 504
            L+G EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV VI  F KI+QLT +TAL+VE+V+DST+C++  + D IKP+IK ER TIILREIPS T  E++  IF G G   + S+RSDVGDTWFVTM SE +A++T+LALR KTF G AIKARLKSEN+L+SF+P   A  V   +A                      G PYG      +P M    NYG                      Y+G   RGG   GRG                                H    Q        G       G  +           QQ   G    G  A+ P +      AA     P A             Y  +DI++IV  + ++D  +  G  D   H  A  A+A+  L+  QR+ SI++ R+ +R+GRP+  + V  G++DY + MYGE +        +Q+A SAP
Sbjct:    9 LEGAELKQAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDNTALLVEAVQDSTICSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVEAIFEGCG--KVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYPTQPAENVIAPSA----------------------GAPYGGRGYYASPNMGYYDNYGVQYNTVNPRQHNNYSQSAENGRYAGNNQRGGSTAGRG--------------------QGRQNRGNGAQHH----QQKDVRAKSGSFEQRGPGSSRKNKDKRSKAASQQQTNGSSN-GKKASTPAERQPVLNAANFPPLPTAQEEDRTSNVITYSYAHEDIMEIVKNMDENDCMLPEGKMDYAVHPAALTAEAHPDLLRNQRTYSIEQARDAMRQGRPIRSDSV--GSIDYESMMYGEDYTKDAREQRKQKAESAP 437

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BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJK8_PYTOL)

HSP 1 Score: 223 bits (568), Expect = 1.070e-59
Identity = 179/435 (41.15%), Postives = 231/435 (53.10%), Query Frame = 0

Query:   65 KLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTV--TPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXXXXMPG--GIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVGMVQXXXXXXXXGGMMAGARGGMQMXXXXXXXXXXQQHGMGQQMMGMNANHPQQAAAPAPAAGGLGYPGAFI---QYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGE 492
            KL G+EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV  I  F KI+QLT   AL+VE+V DSTV ++  T D IKP+IK ERNTIILREIPS T  E+++ IF G G   + ++RSDVGDTWFVTM SEDDA+ T+LALR KTF    IKARLKSENLLRSF+P     +V+P  A                        G  YG   G  A     Q N G  G GA+   + +   XXXXXXXXXXXX                    G  Q         G    A G  +                 +Q +  +AN P     P PA G        +   QY  +DIL+IV  + + D  +  G  D   HS+A    A+  L+  QR+ SI++ RE +R+GRP+  + +  G++DY + MYGE
Sbjct:    9 KLVGEELKKAIKQQVEFYFSRANLANDAYLVSQMNSQMYVPVDTIIAFGKIKQLTESAALLVEAVADSTVVSLNETKDAIKPTIKSERNTIILREIPSATQPEEVKAIFEGSG--EVVNVRSDVGDTWFVTMASEDDAVKTLLALRSKTFNNAPIKARLKSENLLRSFYPT---QQVEPVVAASGVSAYARGYYATGPAGGYYDNYGAQYGQQRGAYANGAGNQRNQGGRGQGAQ---FRQXXXXXXXXXXXXXXXAKSNSFDQQRPASRKAKDKKGKGQQAAAQQQNSGNAKRASGTAE-----------------RQPVLNSANFP-----PLPANGEKPVAAPEVIKYQYAHEDILEIVKHMDEDDCKLPEGKMDYEAHSVALTPIAHPDLLRNQRTYSIEQAREAMRQGRPIRSDSI--GSIDYESMMYGE 411

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BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.
Match: HTH (La-type RNA-binding domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXK9_9STRA)

HSP 1 Score: 219 bits (558), Expect = 6.500e-59
Identity = 173/429 (40.33%), Postives = 219/429 (51.05%), Query Frame = 0

Query:   66 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDG--IKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXXXXMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVGMVQXXXXXXXXGGMMAGARGGMQMXXXXXXXXXXQQHGMGQQMMGMNANHPQQAAAPAPAAGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGE 492
            L G  L  ALK QVEFYFSK NL +D FLVS+MN+QM VPV VI  F KI+ LT+D AL+V+S+KDSTVC+++P+G  IKP+IK ERNTIILREIPS T  + +  IF G G   + S+RSDVGDTWFVTM +E+DA+NT+LALR KTF    IKARLKSEN+LRSF P     E  P+A                         PY   NG    +    P Y  + P A G  Y                                XXX      XXXX        A A G               +H   Q ++  +AN P     P P     G    + +Y  DDI++IV  +  +D  +  G  D   H  A    A+  L+  QR+ SI++ RE LR+GRP+  + V  G+VDY + MYGE
Sbjct:    7 LSGDALKEALKSQVEFYFSKANLVNDTFLVSQMNSQMYVPVDVIVGFSKIKALTTDVALVVDSIKDSTVCSLSPEGDAIKPNIKSERNTIILREIPSATDPKDVEAIFEGCGT--VASVRSDVGDTWFVTMATEEDAVNTLLALRSKTFHDAPIKARLKSENVLRSFLP-----ESTPSANT----------------------TPYQPTNGS---IYGNAPYYSQAVPNAFGVQYAGRTPIAKTVKVGKGKKGQSITGAAVMAAPTTXXXXXXXXXXXXXDLSAAATPAAASGPKSAG----------KHSERQPILN-SANFP-----PLPLVSANGADITY-KYSHDDIMEIVKHMDDTDCVLPAGKMDFETHESALTPVAHPDLLKNQRTYSIEQAREALRQGRPIRSDSV--GSVDYESLMYGE 384

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BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.
Match: HTH (La-type RNA-binding domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GF54_9STRA)

HSP 1 Score: 218 bits (554), Expect = 2.280e-58
Identity = 182/429 (42.42%), Postives = 230/429 (53.61%), Query Frame = 0

Query:   66 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDG--IKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXXXXMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYGRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVGMVQXXXXXXXXGGMMAGARGGMQMXXXXXXXXXXQQHGMGQQMMGMNANHPQQAAAPAPAAGGLGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGE 492
            L G  L  ALK QVEFYFSK NL +D FLVS+MN+Q+ VPV VI  F KI+QLT+D AL+++S+KDS VC+ +P+G  IKP+IK ERNTIILREIPS T  + +  IF G G   + S+RSDVGDTWFVTM +E+DA+NT+LALR KTF    IKARLKSEN+LRSF P  +AA   P+A                         PY   NG    +    P Y  + P A G  Y                  XXXXXXXXXXXXXXXXX      X            G                  +H   Q ++  +AN P     P P     G    + +Y  DDI++IV  +  +DV +  G  D   H  A    A+  L+  QR+ SI++ RE LR+GRP+  + V  G+VDY + MYGE
Sbjct:    7 LSGDALKEALKSQVEFYFSKANLINDTFLVSQMNSQLYVPVDVIVGFSKIKQLTTDVALVIDSIKDSKVCSSSPEGDAIKPNIKSERNTIILREIPSATEPKDVEAIFEGCGT--VASVRSDVGDTWFVTMATEEDAVNTLLALRSKTFHDAPIKARLKSENVLRSFLPDASAA---PSATA----------------------TPYQPTNGS---IYGNTPYYNQAVPNAFGVQYAGRTPLTKPVKAAKAASKXXXXXXXXXXXXXXXXXXXXXXXXKDVSTAPASKSVG------------------KHSERQPILN-SANFP-----PLPLTSSNGADITY-KYSHDDIMEIVKHMDDTDVLLPAGKMDFETHESALTPVAHPDLLKNQRTYSIEQAREALRQGRPIRSDSV--GSVDYESLMYGE 378

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BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.
Match: Uncharacterized (protein n=9 Tax=Phytophthora TaxID=4783 RepID=D0NY71_PHYIT)

HSP 1 Score: 219 bits (558), Expect = 2.680e-58
Identity = 172/444 (38.74%), Postives = 227/444 (51.13%), Query Frame = 0

Query:   66 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTV--TPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEV-QPTAAXXXXXXXXXXXXXXXXXXXMPGGIPYGMMN---GMGAPMMNGQPNYGYSGPGARGG-MYGRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVGMVQXXXXXXXXGGMM-----AGARGGMQMXXXXXXXXXXQQHGMGQQMMGMNANHPQQAAA---PAPAAGGLGYPGAFIQYQ--PDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGE 492
            L+G EL  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV VI  F KI QLT +TAL+VE+V++STVC++  + D IKP+IK ER TIILREI S T  E++  IF G G   + S+RSDVGDTWFVTM SE +A++T+LALR KTF G AIKARLKSEN+L+SF+P   A  V  P+                        G+ Y  +N   G      NG  N  Y+G   RGG + GRG                                +   VQXXXXX    G         AR                 +G            P   AA   P P A   G     I Y+   +DI++IV  +   D  +  G  D   H  A  A+A+  L+  QR+ SI++ R+ +R+GRP+  + V  G++DY + MYGE
Sbjct:    9 LEGAELKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKITQLTDNTALLVEAVQESTVCSLNSSKDAIKPNIKSERTTIILREISSSTKPEEVEAIFEGCG--KVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYPTQPAENVIAPSVGAPYGGRGYYASPNMGYYDNY--GVQYNTVNPRAGQHHNYSNGAENSRYAGNNQRGGAVAGRG-------------------------QGRQNRSNGAGVQXXXXXRAKSGSFEQRGPGSARKSKDKRSKAEKHANNSSNGKKTAAAAPAERQPVMNAANFPPLPTAQEKGEVSNVITYKYAHEDIMEIVKNMDDKDCTLPEGKMDYAVHPAALTAEAHPDLLRNQRTYSIEQARDAMRQGRPIRSDSV--GSIDYESMMYGE 421

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BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F6C7_9STRA)

HSP 1 Score: 218 bits (556), Expect = 5.370e-58
Identity = 166/447 (37.14%), Postives = 220/447 (49.22%), Query Frame = 0

Query:   66 LDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTV--TPDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAXXXXXXXXXXXXXXXXXXXMPGGIPYGMMNGMGAPMMNGQPNYGYSGP-GARGGMYGRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVGMVQXXXXXXXXGGMMAGARGGMQMXXXXXXXXXXQQHGMG---------------QQMMGMNANHPQQAAAPAPAAGGLGYPGAFI--QYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLGLMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGE 492
            L+G +L  A+K+QVEFYFS+ NL +D +LVS+MN+QM VPV VI  F KI+ LT +TAL+VE+V DSTVC++  T D IKP+IK ER TIILREIPS T    +  IF G G   + S+RSDVGDTWFVTM +E +A+NT+LALR K F G  IKARLKSEN+L+SF+P   A  V   A                          YG+    G P   GQP+  Y+G   +R G   RGG                               + G  Q        G       G  +            Q   G               +Q +   AN P     P PA    G     I  +Y  +DI++IV  + + D  V  G  D   H  A  A+A+  L+  QR+ SI++ R+ +R+GRP+  + V  G++DY + MYGE
Sbjct:   11 LEGAQLKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKLLTDNTALLVEAVHDSTVCSLNSTKDAIKPNIKSERTTIILREIPSSTEPADVEAIFEGCG--DVASVRSDVGDTWFVTMNTESEAVNTLLALRSKKFNGAPIKARLKSENVLKSFYPTQPAENVIAPAVGAPYGGRGYYASPNMGYYDN-----YGVQYNTGNPRA-GQPHNNYNGADNSRYGNNQRGGAAGGRGQGSRQNRSNGVN-------------NAGSHQPKDIRAKSGSFEQRGAGSSRKGKDKRTSKTTTQQANGSXXXKRSTAAAASAERQPILNAANFP-----PLPATAENGETSNVITHKYAHEDIMEIVKNMDEKDCMVPEGKMDYAAHPAALTAEAHPDLLRNQRTYSIEQARDAMRQGRPIRSDSV--GSIDYESMMYGE 429

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig972.17824.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Uncharacterized	0.000e+0	87.00	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	2.880e-280	60.05	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
HTH	1.230e-64	64.77	La-type RNA-binding domain-containing protein n=1 ...	[more]
Hypothetical	2.340e-63	64.77	protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta...	[more]
Uncharacterized	9.270e-61	36.46	protein n=1 Tax=Phytophthora palmivora var. palmiv...	[more]
Uncharacterized	1.070e-59	41.15	protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep...	[more]
HTH	6.500e-59	40.33	La-type RNA-binding domain-containing protein n=2 ...	[more]
HTH	2.280e-58	42.42	La-type RNA-binding domain-containing protein n=7 ...	[more]
Uncharacterized	2.680e-58	38.74	protein n=9 Tax=Phytophthora TaxID=4783 RepID=D0NY...	[more]
Uncharacterized	5.370e-58	37.14	protein n=3 Tax=Phytophthora kernoviae TaxID=32545...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 69..149 e-value: 8.3E-18 score: 75.2
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 75..130 e-value: 7.1E-18 score: 64.4
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 65..154 score: 19.387
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 62..152 e-value: 1.3E-23 score: 84.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 153..225 e-value: 6.4E-5 score: 25.1
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 49..349
None	No IPR available	PANTHER	PTHR22792:SF76	LARP (RNA BINDING LA RELATED PROTEIN) HOMOLOG	coord: 49..349
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 151..224 score: 10.036
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 138..224
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 68..155

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig972	contig	Ecto-sp9_F_contig972:15178..24457 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig972.17824.1	mRNA_Ecto-sp9_F_contig972.17824.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig972 14191..24457 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig972.17824.1 ID=prot_Ecto-sp9_F_contig972.17824.1|Name=mRNA_Ecto-sp9_F_contig972.17824.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=863bp
MRMENSPGPVEVPPVTPEAAAAAAAAAGEVAAATVITKVAGASDEVVASS
PPAEGTSPPLVPEVKLDGKELLVALKKQVEFYFSKQNLQSDGFLVSKMNA
QMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQER
NTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDA
LNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAAEVQPTAAAAAAAP
YGLGAAAGPAGAGMPGGIPYGMMNGMGAPMMNGQPNYGYSGPGARGGMYG
RGGMMMQQQQPGGAGGGGGGAGGMRFGGGMQQQQHVGMVQGGGAGGRGGG
MMAGARGGMQMGGMGGGMHQGQQHGMGQQMMGMNANHPQQAAAPAPAAGG
LGYPGAFIQYQPDDILKIVSTLSQSDVAVVPGVADIREHSLAFEADANLG
LMMRQRSVSIDECREQLRKGRPVHREGVIAGAVDYGTYMYGEGHDPQQQA
GSAPRGEGYGGGGAAGESKKKSDRSRREKGADRPSSDDSKARGGEEKPGR
ANPAAATAGAKSKDAPKDSGAAGVKGKGKGSGTATAAAGGGAGEGAPPRP
TRGWEKPEVTQQKQRGLSAGSDAGNRGGKATSAKSAGSSAGTDKKSVSAA
TAPISGDDGVGDSPAAAAAAAAAEGSSEGGGVSADGGGRHPTSSGSKGAK
AKEGSASGGTDAAAPAPSPAAGNGEDAAKAPEDGKAAPPAASQWGGKKSF
LDVVKAPGNLPPPIAAAPSATKQPPSSSSMMGNKAKGGGRIKSPLRGRPE
PPSGESRDMKRSGGRGERDGHRGDGHHHKGSMGAAGGGGKDSARLPNGRS
GGGGSREKGAWA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006630	La_HTH
IPR036388	WH-like_DNA-bd_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom
IPR035979	RBD_domain_sf
IPR036390	WH_DNA-bd_sf