prot_Ecto-sp9_F_contig9707.17813.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9707.17813.1
Unique Nameprot_Ecto-sp9_F_contig9707.17813.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length496
Homology
BLAST of mRNA_Ecto-sp9_F_contig9707.17813.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ7_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 6.860e-73
Identity = 256/517 (49.52%), Postives = 303/517 (58.61%), Query Frame = 0
Query:    3 VARRALEPTDVTITVEGVDTVVHVDYERGRGTVDVAKLAATCGRLLREARAKVLKDSKEAPKKSGKGTADSEEPSELAAKSSLVSLRIALAVRYGDCAKEQGMSKGKVAKEHALWAGSTRNGSAHGIYVARGGRGAXXXXXXXXXXXXXXXXXXXXXXXQPGGXXXXXXXVGTSGSAGRXXXXXXXXPGARG-------------SRGVSMHRRSGDPHPWETAAYFAPRKGALEAAAAGELSLDLLGWEDGCDPQVSDLAAADDEEAQALSGGRLGRQHRDGSNGTMRKKVFRGNPEAANASTSEQISAGFDFLLRREDQRERERXXXXXXXXXXXXXARLTAGGAPGGDSSTLLRLDRVEAVVDARTISLTNFSSWLDAVQRSNPHLTSVRR----GSTRRCSPARLDRGHPSLAARDSAVEGDRAGGHRVQRARSQRVHHLLPP-------LAAKPNFLASTPRGRNRTIALGEVEALPKGPFERAGHGKRSHAPRRAGAMVPTQSSARREQQT 495
            + +R L PT+VT+T +   TVV VDY+RGR TV + KL  TC RLLREA+ K+ K+ K+A KK+G+GT D +EPSE A KSSL     ALAV+Y   AKEQGMSKGKV KEHA WAGS  N +   ++  RGGRG XXXXXXXXXXXXXXXXXXXXXXX    XXXXXXX G +G A  XXXXXXX                   SRG S H R+     WE A YFAPR+GAL+AAAAGEL++ LL  E G + +V DLAAADDEEAQ LSGG+LGRQ+RDG+NG+ R +VFRGNPE ANAS  EQ++AGFD+L RR D+RE   XXXXXXXXXXXXX          GD+S+  RLDR+EA V+ +   L      L+ V RSN       +    G      P  +    P          G  +G  RVQ A         PP        A  P FL++     NR    G   A   G       G+        GAM PTQSSA R  QT
Sbjct:   35 IVKRMLIPTEVTVTEDAEVTVVTVDYQRGRDTVAIDKLVDTCQRLLREAKKKIEKEQKDALKKTGEGTEDPKEPSEEAEKSSLEH-HTALAVQYDLYAKEQGMSKGKVGKEHAEWAGSMSNSNTEDLFSLRGGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGGAXXXXXXXXXSXXXXXXXXXXXXXXXXXXSRGASNHWRTDPVEDWERAEYFAPRRGALDAAAAGELTVYLLPEEGGWEEEVEDLAAADDEEAQMLSGGKLGRQYRDGANGSARNQVFRGNPEVANASVHEQLAAGFDYLFRR-DEREXXXXXXXXXXXXXXXXXXXXX-----GDASSA-RLDRMEAKVEDQNGKL---DKLLELVGRSNAMQQPAPQFGVAGFHSAMYPGPVGPWPPQSGGTGLGGGGGSSG--RVQGAVG--APRTAPPPSTTAGGQAELPGFLSAERGAGNRAAGRGGASAGSVGDGGARASGQ--------GAMAPTQSSAIRVNQT 528          
BLAST of mRNA_Ecto-sp9_F_contig9707.17813.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP5_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 2.450e-72
Identity = 205/368 (55.71%), Postives = 242/368 (65.76%), Query Frame = 0
Query:    1 MEVARRALEPTDVTITVEGVDTVVHVDYERGRGTVDVAKLAATCGRLLREARAKVLKDSKEAPKKSGKGTADSEEPSELAAKSSLVSLRIALAVRYGDCAKEQGMSKGKVAKEHALWAGSTRNGSAHGIYVARGGRGAXXXXXXXXXXXXXXXXXXXXXXXQPGGXXXXXXXV----------------GTSGSAGRXXXXXXXX----------------------------------------PGARGSRGVSMHRRSGDPHPWETAAYFAPRKGALEAAAAGELSLDLLGWEDGCDPQVSDLAAADDEEAQALSGGRLGRQHRDGSNGTMRKKVFRGNPEAANASTSEQISAGFDFLLRREDQRE 312
            +++A+R L PT+VT+T +  DTVV VDY+RGR TV + KL  TC RL+R+A+ K+ K+ ++APKK+G+GT D EEPSE A KSSL     ALAV+Y   AKEQ MSKGKVAKEHA WAGSTRN +   I+  RGGRG XXXXXXXXXXXXXXXXXXXXXXX    XXXXXXX                 G S     XXXXXXXX                                        PG RG RG S HRR G    WETA +FAPR+GALEAAAAGEL++DLL  E   + +V DLAAADD+EAQ LSGG+LGRQ+RDG+NG+ RK+VFRGNPEAANAS  EQI+AGFDFL RR+++ E
Sbjct:  122 LDIAKRMLIPTEVTVTEDAEDTVVTVDYQRGRDTVAMDKLVDTCQRLVRDAKKKIEKEQRDAPKKTGEGTVDPEEPSEEAMKSSLEH-HTALAVQYDLYAKEQSMSKGKVAKEHAEWAGSTRNSNTDDIFSLRGGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSTXXRPGGRGYRGASNHRRPGGEEDWETAEFFAPRRGALEAAAAGELTVDLLPEEGDWEEEV-DLAAADDQEAQMLSGGKLGRQYRDGANGSARKQVFRGNPEAANASVGEQIAAGFDFLFRRDEREE 487          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9707.17813.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized6.860e-7349.52protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.450e-7255.71protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 306..329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9707contigEcto-sp9_F_contig9707:529..3293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9707.17813.1mRNA_Ecto-sp9_F_contig9707.17813.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9707 412..4258 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9707.17813.1 ID=prot_Ecto-sp9_F_contig9707.17813.1|Name=mRNA_Ecto-sp9_F_contig9707.17813.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=496bp
MEVARRALEPTDVTITVEGVDTVVHVDYERGRGTVDVAKLAATCGRLLRE
ARAKVLKDSKEAPKKSGKGTADSEEPSELAAKSSLVSLRIALAVRYGDCA
KEQGMSKGKVAKEHALWAGSTRNGSAHGIYVARGGRGAGGRGAGGRVAGG
RGAGGRSAGGRQPGGGRGAGGRVGTSGSAGRGSDVGGRRPGARGSRGVSM
HRRSGDPHPWETAAYFAPRKGALEAAAAGELSLDLLGWEDGCDPQVSDLA
AADDEEAQALSGGRLGRQHRDGSNGTMRKKVFRGNPEAANASTSEQISAG
FDFLLRREDQRERERYEEEREERKAAREARLTAGGAPGGDSSTLLRLDRV
EAVVDARTISLTNFSSWLDAVQRSNPHLTSVRRGSTRRCSPARLDRGHPS
LAARDSAVEGDRAGGHRVQRARSQRVHHLLPPLAAKPNFLASTPRGRNRT
IALGEVEALPKGPFERAGHGKRSHAPRRAGAMVPTQSSARREQQT*
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